Array 1 30-391 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUP01000113.1 Thermococcus sp. ES12 NODE_114_length_407_cov_0.400000, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 30 30 100.0 36 .............................. TGAGTGCCTACGGAAACTCAACCAAAGAAGCCGTTG 96 30 100.0 36 .............................. ATTGACATCAAGGCTTACGTGCAAGACGGCACGATA 162 30 100.0 37 .............................. TAAGACGCTCCTTAATATCCTCGAAAGTCTTAACCGC 229 30 100.0 36 .............................. ACAAGTTGGATAGGTTTGAGGACGAGACAGCATGCA 295 30 100.0 37 .............................. ACTGGAGAGGAAGGAATGATAATTCTTGCAGTTGATA 362 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 100.0 37 GTTCCAATAAGACTTTAGAAGAATTGAAAG # Left flank : CCAAACATCGTTAATTGGATCAACACGGCG # Right flank : GTTAGATTCTTTTCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAGAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [26.7-20.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 254676-251826 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUP01000001.1 Thermococcus sp. ES12 NODE_1_length_834800_cov_24.114338, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 254675 30 100.0 38 .............................. CGACGGCCTCCAGAACCCCAGCCCCGCCAAGGTCCCTA 254607 30 100.0 36 .............................. CCCACCTCACTGATAATAATAAACCTGCTGAACGTT 254541 30 100.0 37 .............................. ATTAGAGAAGTGGAGATTAAGGGCAGGCGGTTTAAGG 254474 30 100.0 37 .............................. ACGCTAGCGACATAATGCTTATCTTCGGCGATAGGGG 254407 30 100.0 35 .............................. CGCTCTCCCACTCGACTTTTATCGCATCATCTAGC 254342 30 100.0 37 .............................. GTAAAACTTTACGAACGTATTCTAAAATTAATCGAAT 254275 30 100.0 36 .............................. CATGATAGATTTCTCGACCATTTCCCTGTCCCCGAA 254209 30 100.0 37 .............................. AGAGAGTGCCTCAATCATGTAGCCAATAGCCTGGGGA 254142 30 100.0 37 .............................. TCTGTGTCAGGTGGGTGTCCTTTGAACAGCATGACAT 254075 30 100.0 40 .............................. CTTCTCCAGAAGCGTTGTAAACTCCAAACACCGCTACCCA 254005 30 100.0 36 .............................. AGAACATAGAAGTCTGGCCATTCTCATCAGTCCTGG 253939 30 100.0 37 .............................. AGAGCGACATGGAGATAATGAAGGAGCTCATTTACCG 253872 30 100.0 36 .............................. TCTTTCTCAAATTAACGAGCTGACTGAGTTCTGCAA 253806 30 100.0 38 .............................. CAAGGCGTACAAGATGAACAAGGAGAAGGACCTCAACG 253738 30 100.0 38 .............................. GACAAGCTTAAGAAGAAGTATCAGGAGTATCTTGAACT 253670 30 100.0 36 .............................. TTTCGAGATAATGCCCCTCGCTGACGCCTACCGGAG 253604 30 100.0 37 .............................. CTCCTCGGAGGTGGGGAGTGATGGTCGCAGCCAGGGC 253537 30 100.0 37 .............................. CATGATGTCCCTGCGGTAAGTCCGCCTGTAGGCCTCC 253470 30 100.0 36 .............................. TTCTCGCGAAGAACTACTATTACATCGTTTACGGCG 253404 30 100.0 38 .............................. CCGGCTCAAAATCAGCCCTAACGAAAAGCTCCCCGTCG 253336 30 100.0 38 .............................. GGCGACCAGGTGGTTTACTACAACATAACCCTAAGCGG 253268 30 100.0 35 .............................. AGGTTCGGCTGGCGATAAGGTTACGGGCTTTGTGG 253203 30 100.0 38 .............................. CCAGTTCTTGGGAGTAGGACCACCAAGGCGAACATAAG 253135 30 100.0 37 .............................. CCCTGACCCTGATCTCACAAAATCAATCGAAAATTTT 253068 30 100.0 39 .............................. ACGGGGTGGGGCTCGGTGTAGTGGTTGGTTTACTACTTG 252999 30 100.0 38 .............................. TACCTGGGCTTTGCGTATCGCCTCCAGCCCATCTTCCC 252931 30 100.0 38 .............................. GGCGCAAGTTTGGCACGTCTTCAACATCTTGGACATTT 252863 30 100.0 37 .............................. CTGTTACTGTCATGTTCGCGGTTTGGTTTAAGTCTAT 252796 30 100.0 36 .............................. TAGCTTCCCGGTCACCGTATCCTTAACGTTAGCCAA 252730 30 100.0 39 .............................. TGCGGAGGGTCTCAATCGCGCGCCTCGCAGTCTCGTCGT 252661 30 100.0 37 .............................. CGGAGTAAAATCGAATTTTACGGTTACTGTGTCGGTT 252594 30 100.0 36 .............................. TGAGTAGCTCGTTCCTGTAGTGTACCCACGTTTCCC 252528 30 100.0 37 .............................. TCAGACAGGGCAAAAGAGGTTTTGGCTAAGTTAGGGT 252461 30 100.0 36 .............................. GATGTGGCGCTCTGAGTATCCGAGCTCTGCCGCTAA 252395 30 100.0 38 .............................. ACTAACTCCCTGTGATACTTCATCAGTTGTATTAACTC 252327 30 100.0 36 .............................. TTCTCGGTGGCAAAGAAGTACGGCAGTAAGGAAGCT 252261 30 100.0 39 .............................. CTCAAGGCGCTTGAGAATAACCTCGCGCCCTTCTGGCGT 252192 30 100.0 37 .............................. GATTCGGGTTATTGGAGGATTCTTCTCTGATTTTTTA 252125 30 100.0 38 .............................. GCCTGCTTCAGCTCCCTGCAAATGAGCAGCTCCTTGAC 252057 30 100.0 36 .............................. TTTTCATCGCCCTGGTGGTCTACACCGTGCACAGCT 251991 30 100.0 37 .............................. TGTTGAAAATTTTAGAGGATAGGATAACGAGGCCGTC 251924 30 96.7 39 .............................G GTCATCTTGAAGGATAAGGTTATCCTCACCGTTCACTCT 251855 30 76.7 0 ...........G.C.C.T..A...C....G | ========== ====== ====== ====== ============================== ======================================== ================== 43 30 99.4 37 GTTGCAATAAGACTCTAGGAGAATTGAAAC # Left flank : GAATTTGAGGTCTCTGAATTTAACTTTTGTGGCGTATCACGCCTGGAACGCTTTATTCTTTGAAACGGGTCGTTGAAGGGACTAGAACCTCGAATAAGCCCTCCCCCATGCTCTGGAAATCGATTTTTAGGCCTTTTAATTTGTAACTTTTTGTTTCATATATTTCACGATCGCGTAACGAAATATTTTCGAAAAGTAAAACCGAGCCATGATTGGGCCTGGGCATACCACTTCCTTGAGGAGATACGTCCCTTTCCCATTCTGGCATTAGATGCTGTCTATTCGCGAATTTACAGCCCGTTTAACCCTTTGCATTACCCTGCAGTGTCCATCGGCCCCGTGGGAAGCTCCTTTCAGGAGCATTCTTTATGTGGGTTAAAGCGCTGAAAAGGCTCGGATTCGAAGCCTGATGGGACCCTTTTTCCATCGGTTTTCAGAAAGACTTAAATATTCGAAGCCTCTCAATACTCCAATGGGCAAACGGGCAAATTTTCCGCCCT # Right flank : CGGGAATCACTCCTCTCTCGCCAGCTCCATCTCGGTAACCCGCTCAAAGACGGTCTTGTGGTTCCCAAAGGCCTCAAACATTCTGTCAGAATAGTTCCTGGACGCCGTCTCAAGGAACAGTCTGAGGTTCCTGCTTATCTCGTCGTTCATTGGAACGTGGAGCGGCATCGGGTCGTAGTAATCGAGCCCCTTCATGAGAGCCGTCGAGAAGTACCAGAGTGTCTTCCTGACCTTCCTGCCCTTTATCCTCGAAAAGCTCGCCTCCATGCAGTTGAAGGCCGCGTGAAGGAGTACTATCATGTCTATCTCGACGCCCTTTCTAAGAAGCCTCTCCCGCTCGGAGTCCCACCGGAGGTCCTTTATCCTGTAGCCGCTTCTCGTCTGTTCGTCGTAGGGGACATCGATGTCGTAAATTCCCTCCACCCTGGGGTCATAGACGAGGACGTCGGTGCCGCCGACTATGGTGAGTCCCCCGTCCCTGACCTCCACAACGGTGTTCT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAAGACTCTAGGAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 2 726432-728466 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUP01000001.1 Thermococcus sp. ES12 NODE_1_length_834800_cov_24.114338, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 726432 30 100.0 36 .............................. CGGTGTAGGAATATGGGCGTTCCACCCTCTCGAAAA 726498 30 100.0 36 .............................. TTGTAGAGGAGCGTGTACTGGTCTTTCTGGGTCTCA 726564 30 100.0 37 .............................. CTAAGACGCTTGAGGAGATGAGCATCAAGGAGCATGG 726631 30 100.0 36 .............................. CTCGATGATATCAAGACCAAAGTTCTTACGAACCCA 726697 30 100.0 38 .............................. ACGTCTTTGGGGAACGTCGGGGAACTGGGGATTTGGGG 726765 30 100.0 35 .............................. GTTCAAGGGTATCGTCGCGGCGATTGCAGAGGGCG 726830 30 100.0 38 .............................. GGAGGACGCCGGGTACATCAAGCTGGTGAACTACCCGA 726898 30 100.0 37 .............................. TTGCAGAGTGTAACCAAACTCCTCGACGAGCTTCTTA 726965 30 100.0 37 .............................. ACACGCCAAGGACTATGGCATCAACCCCCATGGTCAT 727032 30 100.0 37 .............................. TTAATGTATTAGTTTTTTAGTGTGTTTAGTGTTGTGA 727099 30 100.0 36 .............................. GAACCAGAACTCCACCGTCCCGGCGTCGCTGACGTG 727165 30 100.0 38 .............................. GTAGCTGTGCGTCTTCTTCCTTCATAAGCTCTCACCCC 727233 30 100.0 37 .............................. CGACCCGCCCACGGACGGCTTGGTACTTTGGTATGCC 727300 30 100.0 36 .............................. TATTACCGGCGTTGCATATGAAAGGAAGGGGTGGGG 727366 30 100.0 37 .............................. CCCTGTGAAAAGTTCAAGCTTGAGGATGAAGAATGAT 727433 30 100.0 37 .............................. GGGCGCTCTCCCACTCGAAGCTGAACTTTCCTTTCCA 727500 30 100.0 37 .............................. CTCACGCTGCTCGTTCTCTGAAAAGATTTCGAGGGCA 727567 30 100.0 37 .............................. ACCCCAGTTCACGTACGCCCATGAGCCGATGTACACA 727634 30 100.0 37 .............................. AGGTTAAGGCGTTTGAGAAGTGGTCAAAGAGCATGGA 727701 30 100.0 37 .............................. CTCATGTCCCTGACCTGGATAGTGCCATTCGCCTCGC 727768 30 100.0 37 .............................. CATGCCCCACCTACGATAAAGAAGAGAAAGGGCACGC 727835 30 100.0 37 .............................. GAGGCGGAAAGGCAGGCAGATGGTCTTTAATGTTCAG 727902 30 100.0 38 .............................. CGAAAAATGCTATTTTAAAGTCAGGCTGGTAACTGTCC 727970 30 100.0 36 .............................. CGAACAAACCTTTGGGCCATCCTCCGCTCACCTCCA 728036 30 100.0 38 .............................. CTTTAACTTCTGTGATCATTGCAGAAGCGTGTCACTCG 728104 30 100.0 37 .............................. TTAATAACGTATTTAGCGTTCCTTTTCTTTTTGAAGA 728171 30 100.0 35 .............................. CGTTGGTTCGGCGAATACTTGCTGAAAGAGATTGA 728236 30 96.7 38 ..............C............... CGAAGCGCGGTGGGAGCTTCAGGAGCTCGACGGTGACT 728304 30 96.7 36 ..............C............... GAGGTCTCCAGTGGCTCCATCTTCCTTGACATCGTA 728370 30 90.0 37 .........G....C..A............ CAAAGGGGGCGAGATGATCGGAATCGAAGGGCAGTAA 728437 30 90.0 0 ..............C..A......C..... | ========== ====== ====== ====== ============================== ====================================== ================== 31 30 99.1 37 GTTGCAATAAGACTGTAGGAGAATTGAAAG # Left flank : GGTTCTCATGTTTAAGGATGAGGAAACCTGGTTTATAAGGTTCACCAGACCATGCAGAATCTTAAAGTACATGCAGCAGAACTGCGGCGATAGATTGAAAGCCCAAACTCTCCCGAAGGTCTTTAGTAACCTTCCCACAGTATCGCACGCTTAGTTTCATTCATGTCAGATTTTGTAACGAAATTTTTTCGAAAATCACGGATTAGACAGCTCCTCCGCCAAAATTCGCGAAACCCCGATTAAAATAAAGATTTTCTGAGTACTGGCGATTTAACGGGAATATCTCCAAATTCCAGTCAGATTCTGGCCCTGGAAGGCGACAAACAGGGACGGGACATAAAATACAGGAAACACCAGCGAAAAGTAAACGAAAAATGGCCGGCTCTTGTACCCCGTACAGCTCCCCAGAAAAGTCCGCAAATACGAACCTTCGAGGAAAACCTTATAAATTTGAAGCTCGTCTAATTCTCTGTTGGGCGAAAGAAAGCAAAAACCGCCCT # Right flank : GATGGGCTGGTTAGGTAGAATCAAAGGAAATAAAAAAGCGCCATCACTCCACCCTTCTTCCAAGCAGACGGTTTATTCTCGCCCGTATGCCCCTGTTGATCTTGACCAGCATGACGGTTCTTGGGCATCTGCTTGCCACCCTCTCGGGCACTTCACCGAATATCAGCCTTTTGAAGAGCGGCTCCCTTGTTGCACCCATCACCACGAGGTCGTGCACCCTGCATTCCTGGAGAATTGCCTGTACCGGGTCGCCGTCCACTATCTTAAGTTCGGCCCCCTTTATCTTCTCAACGACCGGCTTAAGGCGCTCTCTGAGCTTCTCCTCCGGCTCATTCTCAACATTAACGCTCAGGACAGTAACCCTGGCACCGTAAACATCGGCCAGTATTGAGACGAGCTCTGCGCTCGCGGCGCCCTGTTTTCCTCCCCTCGTCGGGAACAGTATGCTCCCTATCGTTTCTAGCTTCTCTGTATCGCCGGGTTTTATGACGAGAACGTTG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAAGACTGTAGGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 205519-203272 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUP01000003.1 Thermococcus sp. ES12 NODE_3_length_277841_cov_25.904996, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================================== ================== 205518 30 100.0 35 .............................. CTGATGGAGCGGTCAGGATGAGAACCACGACGAGG 205453 30 100.0 36 .............................. GTATTCGATTAGTATAAAGGGCGGAGAACTGGGGAG 205387 30 100.0 38 .............................. TTTGAACTTATAAGTCGCGTGCGGGCCGACCAGGCGGG 205319 30 100.0 37 .............................. TCGAGGTTTCAACTGGCGGCGCGGTGGTGTTTAACGA 205252 30 100.0 37 .............................. TTCTCTTCATTTTTTACCACCTCCAGGTTTTTTTAAA 205185 30 100.0 37 .............................. TCGTTTTTATTATTGTTGCTGTCACACTTTCGCTTAA 205118 30 100.0 36 .............................. CTACGATGTGCGTTTCTACTCAAAGAGGAGTGGACT 205052 30 100.0 37 .............................. GGATTAGGGAAGATTTTAGGCGGCCTTGTAGCGGTAA 204985 30 100.0 37 .............................. AGGTATAAGCGTTGTTAACAATGCTGGTAAATTCACA 204918 30 100.0 37 .............................. TAAACCGCTCTTCATCTATCTCTTCCCACTTATACCG 204851 30 100.0 37 .............................. CCGACATCGCGATCCCAATGGACCCCAGGATCCAGAG 204784 30 100.0 36 .............................. CAGTTCATAAGCTTTCAACACTTTTGGCGGCATTGC 204718 30 100.0 36 .............................. TCGTTTTTATTATTGTTGCTGTCACACTTTCGCTTA 204652 30 100.0 35 .............................. AAGCCCACACGGTCAAATTTTGCCGAGCCCCCCAG 204587 30 100.0 36 .............................. GAGACGGCTTACGAGATACTCGAAAGGGTGCTTAAG 204521 30 100.0 36 .............................. TGACCTTAACAGCCCCGTAATTGAAGCTATTCACAA 204455 30 100.0 36 .............................. ATTTAGAGCACGTTACGGATGTGTTAGTTGGGACAG 204389 30 100.0 38 .............................. AAGCGCTTTTATAAGGTCCTGGTCGGCTATTTGGAGGA 204321 30 100.0 36 .............................. GTCGTTATTATCGCCGCGTTAATCGCCGCGTTGGTG 204255 30 100.0 37 .............................. GTCATGGCGTTTTTCGACTGAAACCAGCTCTAGCTCT 204188 30 100.0 37 .............................. AGGACTATGGGGTCAAGGTTCATGGCCATCACGCTCC 204121 30 100.0 39 .............................. CTTGCTGATGGAGTTGTCATTGTGAACGGAACCATATGG 204052 30 100.0 36 .............................. GGGTGGGTTTATATCGTTCCTTAACCGCCTGGTCGA 203986 30 100.0 36 .............................. AAGAAGTGCTTGAAAGGATGAAAACGAAGTTTAAGA 203920 30 100.0 39 .............................. TGTTACAAGGAGTAACGTCCTGTGCTCGGCCCCAAGTTC 203851 30 100.0 37 .............................. GCATGTATCAAGATGCCGCCCTTCTCCAAAACCTCAA 203784 30 100.0 36 .............................. AAGCTATACAATTAGTTGCCCAATACGTCAACAGCC 203718 30 100.0 36 .............................. TTGAGATTGATGAAGACACTCTGATGTGGGTGCTCT 203652 30 100.0 36 .............................. GGCGAACTCACCGAAGCCGGCGACGGCTTCATTCAT 203586 30 100.0 37 .............................. TGTCCTTTTTGCTCATGATGTAATGCACTAAGTAGCC 203519 30 100.0 37 .............................. GTGCTTCCAGCTCGTTGATGATATCAGCAATTTCTGC 203452 30 96.7 37 ................A............. TCGGCCTTCCCGAGGAGTGGAGGAAGAAGATCGCAGT 203385 30 86.7 53 ................AA.....C.....C TCTATAAAACCCCAGCGGAAGTTCGAGGGGGTGTGGGGGACGGAACGTCCCCC C [203360] 203301 30 80.0 0 CAGA........................GT | ========== ====== ====== ====== ============================== ===================================================== ================== 34 30 98.9 37 GTTGCAATAAGACTCTGGGAGAATTGAAAG # Left flank : GAGGGAGCTTGGATTTCGGGTTATGTAGCGGCTATCACGCTGTTCTATCCCCATTTTCGGTATTGGAGGATGGGACACGAGTTTAATGAAAACTCTGCCCTTTGAGGCTCCTGGAAGCTGATTTCTTCTCTCCTAAATTTGTAACCAATGGTAACACTCCTGCCACAATTTTAAAACGAAATTCTTTCGGAAAGTGGTCATGGGAGAGCAGAGGGCCCCAAGCAACCTGCACCCTGTTGAGAGTGGGGCTTTTGGTCCTAAAGGCTTTCTGGAGGGCATTGTCCCAAAAAACAGGGAAAGCCTCCCTCGGGAAGTCTATATGCCGTTCCAGAGCCCCATCAAAAAAGTCCCTGCAACAACCCCCTGCTGACAGGATCACGAACCAGCTGGCTCCAAACCAGAGGCCTCAGAGAGGCCGTTTACGGCATGTTTTCCAGAAAACCTTAAATATCTGAGGCTTTCTAACAATTTAATAGGCAAAAGAGGGCAAAAATCGCCCT # Right flank : TCTCACAAAAACTCCCCGAACAACAGGTCTTCCCTCGTTCCTCCGGCCTTTTTGAAGACCTTTTCGCTCCAGGAGACGTTCCCAACGTCCTTTGGCCTGTGGGCATCGCTCGCGAAGGCCAGCTTTACTCCACGTTTTATGCACTCTCTTATGAAGCCAACATCGGGGGCGCGGTAGCGGGAGCTTATCTCAAAGGCTTTTCCGTTTGCTTCCGCCAGCTCTATAACCTCCATTAAGCTCTCCTCAGAGGGGTAGCCTATGTGTGGAAAGCTCGCCCCGAAGTGCCCGATTATGTCAACGTTCTCATCGAGGAGAGCAATCTTCACCAGCTCCACGTACTCCTCGGGATCGCTCAGCCAGAGATGGACGCTGGCTATGACGTAATCGAGCTTTTCCACAATCCCCGCGGCAATGTCAACGCCACTGTGGGTTATGTTGGCCTCTATCCCTGCCAGAACGGTTATCTCAGCCTCTTCCTTCCAGCGGTTGATGTCCCTGAT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAAGACTCTGGGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //