Array 1 201755-205202 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVLO01000008.1 Moraxella canis strain 324_MCAT 144_276734_9087432_14+,...,23+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 201755 28 100.0 32 ............................ GTGCTGTGCTGTGATAATGATGGCAACTACGC 201815 28 100.0 32 ............................ ATTCTAAGTGCTTGCGAATGTGCGGTTGTTTC 201875 28 100.0 32 ............................ AATATCCTCTAATTCAGAGCCGAAATCAACAA 201935 28 100.0 32 ............................ AATGCAATTGCTCAAAAAGCAGACCAAGCTGA 201995 28 100.0 32 ............................ AAGAAATGCTACTTTTGGATAGCTTAAGAAAG 202055 28 100.0 32 ............................ GTTTACCGATAATTTTTATGACGGTGATCAAG 202115 28 100.0 32 ............................ ACGCAAAAAAGAAAAACCGCCAATCTTGGGCG 202175 28 96.4 32 .....A...................... GTCAAATCTTTTTGAGCTGATTAAACTTCAAA 202235 28 100.0 32 ............................ ATAAAGGTACAAGCTTTAGACGCAGATACGCC 202295 28 100.0 32 ............................ TGTCAGCGCTTCGGTGACCTGCGGGTCTTTAA 202355 28 100.0 32 ............................ AAGATTTAGATACTCGTCAGGCGTGGCGGTGT 202415 28 100.0 32 ............................ TACCGTAAGTTTGCGATTATCTGCTACAACAA 202475 28 100.0 32 ............................ AGTTTTCTCGCATTTGCTCAAGCTCTTTTTTG 202535 28 100.0 32 ............................ ATCCGTGCGTAATTCGTTCATATATGCCCGAT 202595 28 100.0 32 ............................ AACAACAACGCCTGTGTCTTTAGCGCCGAACG 202655 28 100.0 32 ............................ TTGTGATGGTTTGGGGGTTGTAGGGGGCTTGC 202715 28 100.0 32 ............................ AACAGTGAGCAATCACAATGAAATACCTATTT 202775 28 100.0 32 ............................ GGCTTGATTTGGTTTGATATCGCCTTGAGCAA 202835 28 100.0 32 ............................ AAGTCCTGGCAATGATCCGAATACTGCACCAA 202895 28 100.0 32 ............................ ATGCCCGCAATCAAGGACGGCCAGCACCAGCC 202955 28 100.0 32 ............................ TGTTTGGTTGATGGCTCTATTATCGCCCAAAA 203015 28 100.0 32 ............................ CCATATTTGATGAATTAAAAATCATCTCAAGC 203075 28 100.0 32 ............................ GTAAAGAATTTGCGTGTAATTTGTACTTGCCG 203135 28 100.0 32 ............................ GCTTAAGGCTATTTCCTTCACATTTTTAGAAA 203195 28 100.0 32 ............................ TCAGGGATTGGCGTACCCTGCACAGGGAATGT 203255 28 100.0 33 ............................ TACCTAAAGAAATGGTTACGATTGGCGATGTAT 203316 28 100.0 32 ............................ ATCTTGACGATTGTTGTTCATTAGCTGAGATA 203376 28 100.0 32 ............................ ATCTGAAATAATTGATTATGGTCAAGTTATAC 203436 28 100.0 32 ............................ TCTCGAAAATCGCCCCAATCATTACTGTTATA 203496 28 100.0 32 ............................ ACTTGCCCAAGCCGTCCAATCGCTCACATTGC 203556 28 100.0 32 ............................ GAACATTTCTCTGACCTCTTGGGTGCTCATCG 203616 28 100.0 32 ............................ ATTTGCAATTGCTTGTCTTAATGCTGACTTTG 203676 28 100.0 32 ............................ ATCCATTTCTTCCATTGCGTATTCATAGTTGT 203736 28 100.0 32 ............................ TTGTCTCTCGCCTCTTTTTTAACAAAGCAATA 203796 28 100.0 32 ............................ AATTGGGGTTCGCTGTTTTGATAGTTTGGGTC 203856 28 100.0 32 ............................ TGCATCTTTGGCTCAGCCTTATTCTTTGGTGA 203916 28 100.0 32 ............................ AGAATATTCGGTGCGGGCAAGGTGCGCAAAGC 203976 28 100.0 32 ............................ TGATGGGCGCTCAAATATCGCTACACTAGGGC 204036 28 100.0 31 ............................ TGTTCATCTTTTTTTTATCATCATCTTTTGA 204095 28 100.0 32 ............................ ATCGCATACTCGCGCCCGCCAATCTTTAAGTT 204155 28 96.4 32 ..A......................... AGTAGCTGACACCCCAGCTACCGCCCATCTCA 204215 28 96.4 32 ..A......................... TGTAGCGCTATTTAATAAATTATTAGCGCCAT 204275 28 96.4 32 ..A......................... GCATATTTTCTCTAATAGTGGATGGTTATTCA 204335 28 96.4 32 ..A......................... TTTGGCAAGACATCAGGTCAGAACACGACAAA 204395 28 96.4 32 ..A......................... TATGGCGCGCGTAACCTTATATTTTGCGGCTC 204455 28 96.4 32 ..A......................... AGTCATGGGCACAGCTTCAAATGCACCTGTGA 204515 28 96.4 32 ..A......................... AAAGAGCGCACGCTAGGCGATGATATGAAGCG 204575 28 96.4 32 ..A......................... ATACACACCTGTTGGCGCTTGGTAACTAAAAC 204635 28 96.4 32 ..A......................... ATCACCTCTTCTACGACCGACTCACCATAATA 204695 28 96.4 32 ..A......................... ACTAATTTAGTGAACATGAAATTCAGATTTAA 204755 28 96.4 32 ..A......................... TCATCAGGTGAAAACGCATCATATTGACGGCT 204815 28 96.4 32 ..A......................... TAAAAAAGTTACTTCCATAACATTCTTGGAAA 204875 28 96.4 32 ..A......................... TCCTTTAAGACAAGCATTTCTGCGAATCTTAA 204935 28 96.4 32 ..A......................... TTTTTGCACTATCTTGGCTAAAGCCGCTTAAA 204995 28 96.4 32 ..A......................... GCTACAATATCGTTGTATCGTGGGTCACTTTC 205055 28 100.0 32 ............................ TTCGCCCATGTGGGCTTGATATGGATTTTATC 205115 28 100.0 32 ............................ AAAACTTGCTGATAATTTGGATCAGTATCTTT 205175 28 92.9 0 ........................A.C. | ========== ====== ====== ====== ============================ ================================= ================== 58 28 98.9 32 CTTCACGACCGCATAGGTCGCTTAGAAA # Left flank : TCGCATTGCGGCTTGGGTGATGGATGTCCCTGTGCCAAGCAAGATGACTGTGGTATTGGCGATGGGGATATTATAATAGTGGTTTTCGTATTTGGTTTCGGTGAGATACAGGATGCGCCCGTCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATACATTGGCGCGCTTGGAGTGCAAAATTGCCTTAAGATCCGTAGGTTTGAGCGTATCCATGACGTCAATTTCCTTAATGATGAATTTAATTTAATCACACCCATTATAGCCTGTCAAGCGATGATGCGACCAAATTATAAGCTTATATTATCCATCTGCCATATCAGTTATGCTATACTAAATTTGCCATCAGATGATGATGGGTGTAAAAAACCTTTATTTTTTTAACTATTTAAAAACTTAATAAAATCAATAAGTTATAACTAGTCAACTTTTGATTGGTTAAAAAGGGTCAATCCATCATAAATGGCTGTTATTTCTTAATTTTTTCGGTTATAATTACT # Right flank : AGTGATATTATTGATAAAAAGTAGATCATTTAACAAATATTAACTATGTGTGGAGACAAATATGCTTAGTGATTATGAATTTAAAAGTCAAAGTCTTTTGGGGCGAGTGTTAGAATTCTTTATGATCGTGACTTTTTATTCCGTAGTTATAGTTATTAGTATTTTTATATTTATATTTGTAGCCATTGCCATGATTATATTGCTCGTTTTACTAGGCGCTTTTATTGTTTCTTAAAAGTGAAAGCTCTTATAATCCTAACTACCAATAAGCGGATTATTTTTAGAGATTAACCAAAGCCAATGGGCGCTCCAATACCGCACCATCAAAGATATTTAAGGTATTTAACAGTTGATAGGCTTTTTGTAAAACTGGGCTCAAAAATCTTGTTTTTGGTCTTAAAATCCCTAAATTATCAATTAAGATTAAACGGTTTAAAGAGACAGATTTCCAAGAGAAAATTAATGAATTTTGAGCGCATTCAAGACAAATTAGCCATTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCATAGGTCGCTTAGAAA # Alternate repeat : CTACACGACCGCATAGGTCGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //