Array 1 37134-36703 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWET01000045.1 Prevotella pleuritidis F0068 contig00004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 37133 36 100.0 30 .................................... GGTGTCAAGGATAAATATAAACTTGTGGGA 37067 36 100.0 30 .................................... GAGTTACGTCAATTATCGAAAGATCTCGCC 37001 36 100.0 30 .................................... ACTGCTATGCATAATTGTAGAGTTTTGTAA 36935 36 100.0 30 .................................... CGCGAATAGCGGAATCCGCCGAAGAATGGT 36869 36 100.0 29 .................................... GTTGATACATAATACCCATTCCTAAATTG 36804 36 100.0 30 .................................... CGTACTTGACGGTCACGGTTGGTACACGGG 36738 36 97.2 0 ............................A....... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 99.6 30 GTTGCATCTGCCTTCTATTTGAGAGGCACAAACAAC # Left flank : TGAAAGTATTGAATGTGCAAAGTATGAAGCTATATTGAAGGCACACCAAAGCATTTATAAATTGCTTAGATTTATTACAGATACAGAAAACGACGACTGCATATTGGTGTGGGAGCAGCCTAAGGGCGGCGGAGAGAATGTTTATTATTTCAGACAAGCCAATATACGTAAGTTTATAAAAGAGCTAACCGAAGAGATATACAATAAAGGTAATGGTATCTTTCTATCAAAAGAGGTAATGTCGCTGATATTTGAATATAGAAGTCTCGTCTATGGGCTGTTGCTTACCGAAAAGGACAATCCCAAAGATAAGATAATAATAAAGAACCTGAAACTTGCAAAGAGAATGATAGAAATCCATCAAAATCTCTCAATAAAAATCAGAGAAGCTATCAATTTACAGCAACGGGATTTACATTTCAAATAATCTGAAAGAAAAGAATTTATATTGAAAAAGAAAGGGACAAAGCATATTAGAATCAGGCATTTAAGTCATTTGT # Right flank : AATATTCTCTACCATCTACAGCTTAATTTAGACCGAAACAAATTTATGTCAATAACTTAATTTACTTCGGCTTAGAATAAGCCATAGCCTTAGATTTATGCATAACTATATATAACTCGCTTGATGATAAGTCCTATACTTCTGCCCCACAAGTATAGGACTTCTCGTGAAGAAGTCCTATACCTCTCATCTAACACAAATAGTTTCTAAAAACCTACGAAAGGAAAGAGGAATCTACGAGAATCAGAGATTCCTGTTATTAATCTACGCCAATTCGGAATAAGAAAGTAACCGAAAAGCGACTCTATCATTTACCTGCGAATGGAAAGAGAAGATCTTTTTATGAGAAAGTAGCTCAATCCATCGGAAAATAAAGAAAAAGAAATATTCTCAAGACGACAAGGAAGCGTTAATAAATAAGATATATTCTCTCTTTCCATTGGGAAGTGCAAATAAACAAAAATAAATTTCTTCTTTCCATTGAGACGTGTAAATATATT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCATCTGCCTTCTATTTGAGAGGCACAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 18080-17496 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWET01000024.1 Prevotella pleuritidis F0068 contig00011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 18079 47 100.0 29 ............................................... TTGAAAAAAAGAAGTATTTTTGGCTTTTA 18003 47 100.0 30 ............................................... TCGTCAAAATTTCAAAGAGCCTCCCAGCCG 17926 47 100.0 30 ............................................... GGTCTTGATTTGGACAATCAGTTTAAGCAA 17849 47 100.0 30 ............................................... GGAAAACTCATTATTTATCCACACACTCCA 17772 47 100.0 29 ............................................... CCACTACTATTCATAGCAACACCTTACAC 17696 47 100.0 30 ............................................... TCCTGTGTTCTAATAAGCGAACATGAACGG 17619 47 100.0 30 ............................................... ACACGCAAGAAGCACTTTTGAATATAGGCG 17542 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 100.0 30 GTTGTGATTAGCTAAAAAATTAGTACCTTTGTGGGGTAAACAACAAT # Left flank : ATTCTATGCCAGCATTCAACTCTTTGCCCCCGATGTATGGCGCCATTTCTATTACCATCCCACCCTCAATCCATTCTCTGTCCCGCCGCTTTTAGCTATCTTTCTGGCTTCAGTGTGGGCGATGCTGATCACAGCTCTGGCCGTAGTCGACGACGTGCGCCATCAGCTTCCGTTTCGCTTCGCAGTGATGTACCTCTGCGGTTTAGCCGCCGTTTGTGCTGTTGCCTACATTGTCTTCAGTCTCACCACTTTATATTATGTCGGCTATCTGATACTCATCGCCTATTTCGTCTTTGCCCTCCGTTGTTATTTCACGCACAACCGAGCCTATTATCTCTGCGGAAACTGTGGTGCCAAGCTCCGCCACAAGGGCCGTTGTCCGCGCTGCGGAGCCATCAACAGATAGCTGTTCAGCGTGAAGTGATTATCGAAATCTTTCTTTAAAGCTCCCATCAATACATCTCATCTTTGATTGTCGGTTACTTGTGGTTTCTCCACCT # Right flank : ATAGTTTGTATAATATACTGTGGGATAAGGACTTATTGTTGATTTTACAGAAAGAAAAAATTGTTGTATTGGAATGTGGAGATTCTATGATAAATTGAATTTCCACATTCTGTTTTTAGAATAATTCAAGTTGCTGACCAGGTGCATTCGGTCTTTTTTCTTTCTTGCAAAAGAAGATCTTAATATCTGCAAATTGCTTGTCAGTGATGCACATAATACCGACATTCCCTGCCTCTGGTAGGATTGATTGTATCCGTTTGATATGTACTTGAGCGTTATCCATACTGGCACAATGGCGTACATAGATGGAGAATTGAAACATTGAGAAGCCGTCCCCCATTATATCTTTACGAAATTTTGCTGCCATTTTGCGCTCTTTTTTCGTTTCGGTAGGAAGATCATAAAAGACGAGCACCCACATAACTCTGTATTCATTGAATCTGTCGATCATTCTATTTCAGGATAAGCAATCTTTCTTGATTCTCCATTAAAACATTTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTAGCTAAAAAATTAGTACCTTTGTGGGGTAAACAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //