Array 1 10199-13765 **** Predicted by CRISPRDetect 2.4 *** >NZ_QZEV01000056.1 Paracoccus aestuarii strain DSM 19484 NODE_56_length_21680_cov_55.6252, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10199 29 100.0 32 ............................. GAAGGCAACCGCACGCTGGACCAAAACGCGAT 10260 29 100.0 32 ............................. CCCTGGGGCAAGGCAGAGACCTCGATCACCTC 10321 29 100.0 32 ............................. GGCGAGTCCTACGCTGCCATCGCAGCGCGCCT 10382 29 100.0 32 ............................. GTTCCAAAATAGACATGCCCGCTGCCGTAGGT 10443 29 100.0 32 ............................. GGAAAGCCGGAAACCGCCATGGTTCGATATAT 10504 29 100.0 32 ............................. CCGAGCGCCTGGCCATCGCGCAGGCGGCGGCA 10565 29 100.0 32 ............................. TCTGTCGGCGCTGCAACCATTGCTGCGATCTG 10626 29 100.0 32 ............................. GCGTGGCGGTGGTTTTCGGTTCAGTCCCTGGC 10687 29 100.0 32 ............................. TTGAAGTCAACCGCGCGATGGCGCTTGGGGTT 10748 29 100.0 32 ............................. TCCACCCCCGGATAATCCCGAAGATGGGACAA 10809 29 100.0 32 ............................. GAGTTAGAAAAATGGCCCACACCCGGCACATG 10870 29 100.0 32 ............................. ATTTCACCCCAGCTTTTCTTGCGGGGGTAGTT 10931 29 100.0 32 ............................. GCGCTTGAGCGCGCTCATTCCCCCGCCTCCCT 10992 29 100.0 32 ............................. ATGATTTCTGGCGGTGGGTCGCGTCTTGGGCG 11053 29 100.0 32 ............................. GCGTCGGACAGACGGGTAACAGCCATGATTGG 11114 29 100.0 32 ............................. CTGATACATCGCCAGCGCGGCACGGGCTACGC 11175 29 100.0 32 ............................. TCCGCATCCGTCCGCATCGCGCAGCTCCCTCA 11236 29 100.0 32 ............................. CCATGCGTTGAGCAGGGTGTCAGTGAAGTTCG 11297 29 100.0 32 ............................. GACCACGGCGTCGTGACCGGCTTCTTCGCCGC 11358 29 100.0 32 ............................. ACCGGCGAGCAGCTCCTGACGGCGCGGGTGAC 11419 29 100.0 32 ............................. CCCCACGTCGAGAGCCTGTGGACGCGCAATTG 11480 29 100.0 32 ............................. ATTGACGGCGCATCCGCTTCACGTTGTTGGGG 11541 29 100.0 32 ............................. CGGCGGAGGCGGCCTGCGTGGAATGGTCCGAT 11602 29 100.0 32 ............................. GGGTTGTTCGGCAGCAGTGCGCTGTGCAAATA 11663 29 100.0 32 ............................. CTGCCATGAAGCACCGGAGGGGCTGACATGAT 11724 29 100.0 32 ............................. GCGCAATTTCTAACGAGGCGCTGACCCGCGCC 11785 29 100.0 32 ............................. GCGACCGGGCGCGTCTGATCGAACACGGTCTT 11846 29 100.0 32 ............................. TTTCAAAACTGCGTTTTCTCTCGTATGTATGG 11907 29 100.0 32 ............................. AGCGATTTACTCACTGCGCTGCTGCTGTCTGG 11968 29 100.0 32 ............................. TTGCTTCGCGTTGATCAGCTCGACCGTGACCG 12029 29 100.0 32 ............................. CCTCCCCGGAATGCCGAATTTTGCCGCCCTCA 12090 29 100.0 32 ............................. AAATCGCGTTCCAGATGGAGGTTTCCCGCCAG 12151 29 100.0 32 ............................. GTATAAGGCGCGGTGCCGCCGCTGATCCGCGA 12212 29 100.0 32 ............................. GACGGCCGCGCGGCGGACGGGTCCCTGTGGTA 12273 29 100.0 32 ............................. AACGGCAATAGCTGGGAGCGGCGACCGCTGAC 12334 29 100.0 32 ............................. ATGCGGGGGCGTTTTCTGCAACCATCGACGGA 12395 29 100.0 32 ............................. CCGGACAGCAGCGAAACGCCGTCGCTGTCCAC 12456 29 100.0 32 ............................. ATTACACCGACAACTGCATCCTTGCCCGCGCC 12517 29 100.0 32 ............................. GGGTGAATATGGGGAGTTACCCGCTAGGAACG 12578 29 100.0 32 ............................. CTGGACGCCAACAGCAAGCCCGTCCTGCTTGA 12639 29 100.0 32 ............................. GTTTGGGCGGTTGCGCAAGCGTTCGGGGTGGC 12700 29 100.0 32 ............................. TCATAGATCACGCCCGCGTCCGTGGCGTTTAT 12761 29 100.0 32 ............................. ATCGAGATGTTTATCGTGACGCCGCAAACCGG 12822 29 100.0 32 ............................. CCGGGGCGGCAGATCGAGGCCCGAGAGGTCGA 12883 29 100.0 32 ............................. GTCATGGGCGGGCACTTGGTGACGGTGCCGCC 12944 29 100.0 32 ............................. GGCGGCGCGGCGGGCCTCGGGGTCAGTTATGC 13005 29 100.0 32 ............................. GCAGCCTTCTCAATCAGATGGTGCAGAACGCC 13066 29 100.0 32 ............................. ATGCTGGTGGCCAGCGATCCCTGATCCTGTCG 13127 29 100.0 32 ............................. AGAAGCTGACCGCCCTGCAGATCGACCTGGAC 13188 29 100.0 32 ............................. CTGGCGGACATGGCTGCCTCGCGCGCTTTTGA 13249 29 100.0 32 ............................. AACCGCCGTGCGTCCACCCTCGCCGCCTGTGG 13310 29 100.0 32 ............................. ATTCCGTTCCGCCGCGCTACGGTTCGTCAGGC 13371 29 100.0 32 ............................. GGCGACAGGCGCACCGGCGAGCCATAGACGCG 13432 29 100.0 32 ............................. GTGCTGATCCAAGGCTCTCTTGCCGAGAACCA 13493 29 100.0 32 ............................. GATCTGATCGACACGCGCTACCCCAGCAACGC 13554 29 100.0 32 ............................. CCTGTTATCCGCGTCACTATCGACGCTTGGGG 13615 29 100.0 32 ............................. CTGCACCCGAACGTCTTCATCGGCTGTGCGGG 13676 29 96.6 32 ...C......................... ACCCCTACAGCCGCAACGATGGGGATTGGATC 13737 29 89.7 0 ......................GA..A.. | ========== ====== ====== ====== ============================= ================================ ================== 59 29 99.8 32 CTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GCGACGCCTTCCGAAAGACGGGCCTTCTTGCGAAAATCATCCCCCGAATTGAAGAGGTCCTCGAGGCCGGGGAGCTTCCGCGTCCAGACCCGCCCCCGGATGCGATCGGCCCGGCCTTCGAGGATGACCGCTCGGGTGATTCCGGGCACCGCGGATGATCGTGGTCGTCGTCTCGAACGCGCCGCCCCGATTGCGGGGACGGCTGGCCGCCTGGCTGGTGGAGGTCCGGGCAGGCGTCTATGTCGGCGACTATTCGACCAGAACGCGCGAAATGATATGGTCTCAAGTCTCCGGCGGGATCGAAAAAGGCGATGCGGTGATGATCTGGAGCGCCCTTACAGATCAGGGCTATGAATTCGCCACGGCGGGTCGAAACCGTCGGATGCCGGTCGATTTTGATGGGCTGAAGCTTGTATCGTTCTTCCCATCGGATGCATCATGAGATCGGTAGAACCGACGAGCTTCAAATTGTATCGGTAGATCAACAGTTTGTAGCAAGA # Right flank : GGTGGGGGTTATCGATAGTGTCCCACTGCTAAGCGGCAAGCAGGCGCAGGGGCCTCAGAAGCTGCGACGGCAGCGTGACAGTTGACGAACCACGGGCGCACTGCTGGGTCAGTGGGTCAGGATCCTAGCAATCGAAGCGACGGCACACTGTCGCCACCGGTCACGAAGTCTGCCCAATCCTGCATCATCGGCCTCCGCTCCTCCAGGAGGTCCTCACGCATGTAGGCCGCTTCGAGGGGAGGCAGGCCGTGAGCCAGAGCAAACTCTATGGTGTCCCGCTGGTAACAGCCCTGCGACCGCGCCCACCCCTTGAAACTCGCCCGGGCGCCGTGGCCAGTGATGGAGGCATCAAAACGCTTGAGCAGGTTGAGCGCAGCATTTTCCGATATGACACCGCTTTTGGTGTGGGGCTTCGAGAAAAGATATCCATCTCCACCGGAAAGGATCGCCATGTTGTCCAAGATGGTCGCAATATGGCGGCTGACCGGGACGCGATGGCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //