Array 1 14336-17665 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJAJ01000018.1 Legionella pneumophila strain 2531STDY5467293, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 14336 28 100.0 34 ............................ ACAATGCCGACAAGGGATATGATTAGGACTGCTG 14398 28 100.0 32 ............................ TGTCCGCCGTGTCGCCGCCGCCGGAACCTAAC 14458 28 100.0 32 ............................ GCTTTACTTCTTAAAAAAGACTGGACTACGCT 14518 28 100.0 32 ............................ TCTTTCTTTGCTGCTAGTGCGTCAATAGATTT 14578 28 100.0 32 ............................ AAGGAATGATGAGAATTAGTGTTGCTGAGTGG 14638 28 100.0 32 ............................ ATAGAGACAAGAAACTTCAATCATTGCTTTAT 14698 28 100.0 32 ............................ AGAAGAATTAAAAAACGCTCTTATGCAATGTG 14758 28 100.0 32 ............................ TTGAGAGTAGCAACAGATTTAACCAAGGGTGA 14818 28 100.0 32 ............................ TTCCGCAACCGAGATCATAAACTTGGCTACGT 14878 28 100.0 32 ............................ ATTACTTGTTGTACTACTAATTACTGTATCCC 14938 28 100.0 32 ............................ TACCAGCGAACGAGCCGCCGAATGGAACGGTC 14998 28 100.0 32 ............................ TATCAGACTTAAACGAATCTCACTATAAAACA 15058 28 100.0 32 ............................ GGCGTATAATTATCTCGTATGTATTGCTCTAA 15118 28 100.0 32 ............................ AAAATTGTTTTTCTGCTCAAGAGATGGGGAAC 15178 28 100.0 32 ............................ TATGATGACGGCCTCCACGGAGAACTTGTTAT 15238 28 100.0 32 ............................ ATCACGAATGCACCCAAATTGCCTGTTAGTTA 15298 28 100.0 32 ............................ ATGTAGCGAAGGCGAGGTTCCATAATGTATAA 15358 28 100.0 32 ............................ CACTCGATGGGGTTTTCGGAGAATCATTCAGC 15418 28 100.0 32 ............................ ATTACCATTTTTTTAATCTGCTCAGATAATGG 15478 28 100.0 32 ............................ TTCCAGCTCTAATATTTTACACGCATCATATT 15538 28 100.0 32 ............................ CTGCGGGCTTGGAAATGATGAAGGCTGTTAAT 15598 28 100.0 32 ............................ TGTCTGCCGTGTCGCCGCCGCCAGAACCTAAC 15658 28 100.0 32 ............................ AATTGAACAGATAGTTGAAGAATCAGTAAAAG 15718 28 100.0 32 ............................ TTCTTAGTCCCTTTACACGCTGGGCATCTAAT 15778 28 100.0 32 ............................ TTGAGAGTTGCTCTTATGGCCTCTTTTGTAGA 15838 28 100.0 32 ............................ TAATTCATGAACGATAGGGTAGGTACTAGCAT 15898 28 100.0 32 ............................ TCATTTTGAACTGTAAATAAACCTTTCGTTAA 15958 28 100.0 32 ............................ ACTGTGGTGAGTATGGTGAGAAGTACGGAAGA 16018 28 100.0 32 ............................ ATGTGCACCTACACCGTGAATGTGCCGGTATT 16078 28 100.0 32 ............................ TCTGAGCTTGAGCAGCTTGAAAAACAAATACA 16138 28 100.0 32 ............................ AAAACGTGCTCCACCATTTAGTTGACGGGTCA 16198 28 100.0 32 ............................ GCTTGTGCCATGCGCTTAACTATTGCCCTTTC 16258 28 100.0 32 ............................ GATATGTGAAGAAGCAAAGCAAGTAATTGCTA 16318 28 100.0 32 ............................ TACTAGCCCTTAGCTATGACGAGCTCGACCAG 16378 28 100.0 32 ............................ GATTGAGATTTCAGTCGAATATATTTTACCTG 16438 28 100.0 32 ............................ TGCCCTGAACTTAGATTAATAATTACTCCATG 16498 28 100.0 32 ............................ GCTTGCACTTAGTAGGTAACGCTATCGTCAAT 16558 28 100.0 32 ............................ TATAAAATTTAATTCAGCGTCATATACCGGCG 16618 28 100.0 32 ............................ TCAGCAGCAAGACCCGGGGTCTGCAACTCAAG 16678 28 100.0 32 ............................ AAAGCCGCCGACATACGCCCTAAACTTGGTGT 16738 28 100.0 32 ............................ TATCTATTTAGATATAGCCTTCTTTCTGTAGA 16798 28 100.0 32 ............................ AGCAGTTCCAGCAGCATTTGATGGCTTATAAG 16858 28 100.0 32 ............................ ACAAGAGGCGCAACTAAACCTAACACAAATGT 16918 28 100.0 32 ............................ GGAATTTGTCGGCCGCATAGACCGCTTTTATC 16978 28 96.4 32 ...............A............ TTAACAGTTAATCTTTCAACATCAGATAAACT 17038 28 100.0 32 ............................ TTACCTCATGACTTGCTTTCTAACCTTTGCGC 17098 28 100.0 32 ............................ TGTCCGCCGTGTCACCGCCTCCGGAACCTAAC 17158 28 100.0 32 ............................ CAATTCGAACAAAACATAATCCTCAGGATTCT 17218 28 100.0 32 ............................ TGCTGGATTGTGCCCCAAAGCAAACAGAGACA 17278 28 100.0 32 ............................ AATACGTGGTTATGACCTCATCTAAAGACGTA 17338 28 100.0 32 ............................ ACATGAAGATAAAAAAACGGGCAAAAAGACCT 17398 28 100.0 32 ............................ AAATGCCGACAACGGCGCTTAAAAGGTCTTCT 17458 28 100.0 32 ............................ AGTGAAGCTATTTTTAACTGGGATAACATGAT 17518 28 100.0 32 ............................ TTTTGCCGCTCTTTGAGAGATATTGCTGTTAA 17578 28 100.0 32 ............................ GCGATATTTTTAATCAAGAATTCGAAACATAT 17638 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================== ================== 56 28 99.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTATAACTATTTTTTTAAGATTTAGAGCAGA # Right flank : GTTATTATGTTAAAGGTGTTAGCACGCTACGCAGCAAGGTCGGACCAAGGCCTGACCTTGTTTTGATTAGGAAAGTCTAATCATGACTATAATCTCCATTTCTCTTTATGGAGTACAGCAACCGTTAGTCAAATCTATAAATAACCTAAACAAATAAAAATAAACTCTCTAGTTCCATGGAAATGAGTGTAATTGGATCGAAGTCAAAATAAATTGTGAAGTCTGATTACTGAGAAAATTAAATTTAGTTGATGAGTATCTATTGAATCATGAGAATAATCTAATGGTGTACGTTAATTATACACGTATGCTAAAAATTACTACCTGATGAGCTAGGATATTCTCTACCGCGTTGTTTGAATCACACTGAGTCAATCGTAAATTTATTTAGCATTACTGAGAATTATTTAATCCTCAAAAACTCAATAATAAATTTAGATATTTCACAAAATCATACGGTGAATGCTCTCCTGGTTTCGTCAGTTACTGAAATAGTGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //