Array 1 163711-164937 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXZX01000001.1 Pseudomonas aeruginosa strain VNMU141 MRSN567240_contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 163711 30 90.0 35 GT...G........................ GAGATCGAGTCGGACAAGGCCGAGCGCTGGGAAGT 163776 30 100.0 37 .............................. CGCATGCCGCGCTGCGAGAAAGGCATCGAAGTTGAGT 163843 30 100.0 36 .............................. CTGATGATTTGCTGGAGATGTAGCCATGGGCCAAGT 163909 30 100.0 35 .............................. GCCAGTGCCCAGCATGTCCAGCTTGGCGGCCTCGT 163974 30 100.0 36 .............................. ACCAGAAGGGCGCCGCCATCGCTCAGGCGATCCAGT 164040 30 100.0 37 .............................. ACCGGTATCGCGCCGCGCTTCAACACCGTCAGCACGT 164107 30 100.0 35 .............................. AACGTCGCTGGGGCCACTGTCCAGTACCTGCCCGT 164172 30 100.0 37 .............................. GATGAGCCCAATGTGTAGGAGGGTGAATGCCGTACGT 164239 30 100.0 38 .............................. AGCACGGTCTGGTCCATGTACCAGTCGAAGCCGAGGGT 164307 30 100.0 37 .............................. ATGGCTTTCTCCGGGCAAAAGAAAAGGCCCTATTGGT 164374 30 96.7 38 ........A..................... CATCAGATCAAGGCAGCACTGGTTGAGAAACCCCACGT 164442 30 100.0 35 .............................. TGGAAGTCCCCGACTATCCGGAAGATGCCGAAGGT 164507 30 100.0 38 .............................. GGCGCGACGGTCGTCAGGATGAGCGACGGTGCTGGCGT 164575 30 100.0 38 .............................. TTCTTGAGGGTGGAGAGGCGGGCTACTTTTGCCGGTGT 164643 30 100.0 38 .............................. ACGGGTGCGCCAGTGGAAAGGGAAATCACATGGAAGGT 164711 30 96.7 34 ...........T.................. CATTGCTCCGAGAGCACGTTCGTGCCTGGCATGT 164775 30 96.7 38 .......T...................... AGCCCTGGCCAGGTCGTAATGACCGCAGCCGGTGAGGT 164843 30 90.0 35 ...........T................CA ACTGCCGTTGTCGCGTGACGGCTATCAGGGAATGT 164908 30 83.3 0 .......TA.G............G.....G | ========== ====== ====== ====== ============================== ====================================== ================== 19 30 97.5 37 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : GCCATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGTCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTAGATAGCGCGCAGTGGACACTCCTTAAGCATCGTCTGTGCGACCTAATCAATCCGGAACAAGACAGCCTACGTTTCTACTACTTGGGCACGAACTGGCAACATCGTATGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTAAATGGCCCGCTGATTCTTTAGCGTCGGCGCGAACCTAAAGCGACCGACCCAACCCTGAGGGGTTCGCAGCTCTCTAGCTGATTGATTTATATACTCTTTTTTTGACGTTAGCAGTTTGATGGCGCGCGCCTTGCCTAAATAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAGTAAGTTATAAGTGGGCG # Right flank : GATGGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCTCAGAGCCTGGCCAGGAACTCTTGTGTCACAGTGTCGCGGCCCCAAGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCGAGGAGCGGTGAAGCCCCTCGGGGTGTGGTCCAACTGGTGCAGGGGAGCGTGGTGGTTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGTCTTGGTGCAGCGGCCCTTGGCCGTTCAGGAAGACCTGGCAGAGGTACTGATCGCGTAGCGCGACAGCCGCTTCCGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //