Array 1 25889-25463 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKSS010000005.1 Candidatus Stoquefichus massiliensis isolate MGYG-HGUT-01452, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 25888 30 100.0 36 .............................. TAATTTAATTCCAGTTGGAACCTATCTATAGCACAT 25822 30 100.0 36 .............................. TTAACTATAGTTTTTATATTTTGATTTATATCTATA 25756 30 100.0 36 .............................. ATTGAATTAAAAACAATCAATTCATTTCCACAAAAC 25690 30 100.0 36 .............................. GCATATGCGACCTTATTTAGTGCATCCAACACAACC 25624 30 100.0 36 .............................. ATAAATGGTTCTAAGAAATCTAACTGTGTCTGAGAT 25558 30 100.0 36 .............................. TTTATTTGGAAGATTCTATTTAGTAAGAAAATATAG 25492 30 76.7 0 .G..............CA..C...AAT... | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 96.7 36 GATTAATATCAACATATGATGTTTTGAAAT # Left flank : ACTCATGAATACGCCATTACTCATTAAGAATAAATTAAAGATGAGAGCAATTATTTCTAATGCTAAAGCATTTATAGCAGTTCAAAAAGAGTTTAATCATTTTGATAATTATATTTGGTCTTTTGTTGATTTTCGGCCAATAAAACATTGTTATGAATCATCAAAAGATGTCCCTGCATATGATGAACTTTCAGAACATATTTCTAAAGATTTAAAAAAGCGAGGATTTAAATTTGTTGGTCCAACAATTATTTATAGTTATTTACAGGCTATTGGTATATATAATGATCATGAAAGAAGTTGTGATTTTTATTGATGAATTCAATATTTTACCAACCTTAAATATATCATAATGTAAAATATACTGATTATATCAATCTAATTTCGATTTAATATCATTATCAGATAAATTCTTATTTACTTGGTAAAAATCTTAAATTATCTTCTATATATCATCGTAATTCCATTCTAGACTCTATAAAAATCTATATGTTTTCTAG # Right flank : GACATCTCATATCCTATATATGAGAAATCAAATAAAAGATTTACATTTTTTGAAAATAATGAATCTTGTTGTTGATTTCTTTTTGGTTGTATTTATTGTATAATATACTTATCAAAGAAATTAAAGGAGGTAATATAATGGGATTTCCAAATGATTTTTTATGGGGTGGGGCAGTTGCTGCTAACCAATGTGAAGGTGCATACTTAGAAGATGGGAAAGGATTATCAGTGCCTGATATGTTGTTAGGTGGAGATGTCAATACACCAAGAACTTTTTTACCAAAAACTGATCCAGATGCTTTTTATCCAAGCCATGAAGCAATAGACTTCTACCATCACTATAAGGAAGATATTGCAATGTTTGCTGAGATGGGATGGAATGTTTTTAGATTGTCTATTAACTGGGGACGTATTTTTCCAAATGGTGATGATGAAGAACCTAATGAAGCAGGTTTAGCATTCTATGATAAAGTTTTTGACGAATGTCACAAGTATGGAATG # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATATCAACATATGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 173387-170653 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKSS010000006.1 Candidatus Stoquefichus massiliensis isolate MGYG-HGUT-01452, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 173386 30 100.0 38 .............................. TCATTTAAATTTATAATTTGTCCACTTTTAAAGCAAGC 173318 30 100.0 36 .............................. TGGAAAAATATCTAATGATGTTTGGTATGATGTGTA 173252 30 100.0 36 .............................. AATATAGATGGAATACGCATCTGTTTTGTTGCTAAA 173186 30 100.0 36 .............................. CTGAATCTATCATTAAACCACTGTCCGATTGAACCG 173120 30 100.0 36 .............................. AGTTTGTTATCTCTTAATGTTCCGATAATACCAGCC 173054 30 100.0 35 .............................. AGTATGATTTTTATCAATAACAGTTTTATCATATC 172989 30 100.0 36 .............................. TCAAAAGGAATTAGCCAATTTACATAAGAAAGATAA 172923 30 100.0 36 .............................. TTACTATTAGGAAGTTGCCATATAAGCCCCCAATTC 172857 30 100.0 35 .............................. TCATTAAATGGCTTGTATGAGTTTTTCCAATTTCG 172792 30 100.0 35 .............................. AATGTTTTGCATGCTCCGCCTGAAACTTTTCCGAA 172727 30 100.0 36 .............................. AAATTGCCTTTTCTTTTAACGGGATTGACAAGCATT 172661 30 100.0 36 .............................. TTTTGAATGACTTTAAAAGGGGATGTAAAAAAGTAT 172595 30 100.0 37 .............................. TTGATATTTCAAAAATAGGAAATTACAAGGACTTTGG 172528 30 100.0 36 .............................. AACAAGTTATTTTAACAGTAAGAAAGTGAGGACGAT 172462 30 100.0 36 .............................. ATGATAGAACATTAGGAGATATTACACCCGTTAATA 172396 30 100.0 36 .............................. TTATTGGTAATAAAAACAATTTAGATCTTGTAAATG 172330 30 100.0 36 .............................. CTTTCATAGTGACCAACCTTTGCTTTTGTAACAGTA 172264 30 100.0 36 .............................. CTAAATACACAACTGAAACTAATAAGCCATAAAAGG 172198 30 100.0 36 .............................. TGGCCATTTATACAATGATTGTGGGATTCTATTTTG 172132 30 100.0 36 .............................. AAGGTTGCATCATTTCCTAGAACCCAATAATTTGTA 172066 30 100.0 36 .............................. TCGACTAGACTATAAGCATAATCAACCATTTCTATA 172000 30 100.0 35 .............................. GCAAGTTTATCATATATAACGATATAAATATCACT 171935 30 100.0 36 .............................. AGTTTATGTATTGGGTAGTGTTAAGAACATCTCACG 171869 30 100.0 36 .............................. CAAGAATATAATCCAAATCATTAAAAAGATACATAA 171803 30 100.0 35 .............................. TTCTTTACGTCGAAAAATCTACATTTTTATTCCAC 171738 30 100.0 35 .............................. AAAAATACAATGAATGAAATTTTGAAATATAGAAA 171673 30 100.0 36 .............................. CAGATACTATCAAATACACGCTCCGAAACCTTAACC 171607 30 100.0 37 .............................. ATGAATCTGCTCGAATTTCTTTCAATTCACACGAATT 171540 30 100.0 36 .............................. TGAGACATAATTTTATAAACTAAATAGCGATTTCTA 171474 30 100.0 36 .............................. GGTTTTGCAGACATGCTTCAAGATCATTTGAATTTC 171408 30 100.0 36 .............................. TTACTGCAATCTTGATGATCTAAAAGTAAAGAAGAT 171342 30 100.0 36 .............................. TAGACAGAATGGACATAACAACTACGACCATCATAT 171276 30 100.0 35 .............................. GAAATACTTAAAAATTATGTTGGTTCTTCTATAAA 171211 30 100.0 35 .............................. GAAATACTTAAAAATTATGTTGGTTCTTCTATAAA 171146 30 100.0 36 .............................. TGTCTATGCAACTAAGACAATAAAAAGCAATAATCA 171080 30 100.0 37 .............................. TATTCTAGAAAATATAAAAAACAAGCAGGAAATCCAG 171013 30 100.0 36 .............................. ATACCTGGAGTAGCTTATCCTCGTCTTTGAGGACTG 170947 30 100.0 36 .............................. AGGTAAGACAATGGCTATGACTTATCTTGCGTTAAA 170881 30 100.0 36 .............................. TTTTACGTTTAAGTTTTTTTGCCGTACCTTTTCTCA 170815 30 100.0 36 .............................. GTTTTCTATTTTCCTAAGGCCTAACCTTGATTACAG 170749 30 100.0 37 .............................. CCCTTAACTCCTCTTCAGTTTCTTGTGACATACCATT 170682 30 73.3 0 .T....C..T.G.....T......A.C..G | ========== ====== ====== ====== ============================== ====================================== ================== 42 30 99.4 36 GCTTAATAGCAACATATGATGTTTTGAAAT # Left flank : AAGATTTTGAATTCTTTTCTTTGAAAGAAGGCCAATAATGAAGAAAAAGTATAACTATAATTATGCAATTGTATTTTATGATATTGGAGAAAAGCGTGTTCAAAAGGTTTTTAAAATATGTAAAAAATATTTATCACATTTTCAATATTCTGTATTTAGAGGGGAGATTACCCCATCAAAACTAATTTCTTTAAAAACCGAATTAAATAAAGTCATTAATAAAGAGGAAGATTTTATATGTATTATAAAAACATTTAATGATAATGTATTTGATGAGGAAGTTTTAGGTAATAAAAAGAGTGAAGGTGATGAATTGATCATATAATTTACCAGCTAAATTTATCTTTATAATTGAAATTATACTGATTAAATCAGATAAAAGTGATATTTTTAGAATAATTTTTGTTATAATCATTTTTACTTGGAAAAAAATCGTAAAAACATTGATGAAATCAGTGTTATTTGATTTGTTATAGTCATGAAAACGTTGATTTATCTAG # Right flank : TGGTTTTATTTTATTGTCTTTGTTGTTATAAAGATGAAAAAAGTGAAGATGAGCTAAATCATTCTTCACTTACAAAATTCATTCTTTAAGCTTTAATTGCCCATCTCATTTTAGTTGATCTAGCACGGCTATTAATGTGACATTCTTCTTTGCTAGGACGTATCACATTTCTTGCAATCTCACTATAAATCCCAAGATTTTTCATTTCTTTAAAAGCTTTTTTAACAATTCTATCTTCTCCAGAATGAAAAGTAAGAATAGCCACTCTACCACCTGGTTTGAGAATACTAGGAAGTTTTTCCATGAATTCCATAAGTACATCAAATTCACTATTAACTTCAATACGAAGTGCTTGAAAAACTCTTGCAGCCGACTTTTTAATTGAATCTTTTCTCTCTTTAGTAGGAATAAAAGAAAGGCTTTTTTCGATAATCTTATAGAGTTCAGTAGTCGTGTTTATAGGATGTCCAGCTTTTAAAAACGAATCTATATTAGATGCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTAATAGCAACATATGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.00,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 184677-182230 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKSS010000006.1 Candidatus Stoquefichus massiliensis isolate MGYG-HGUT-01452, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================= ================== 184676 30 100.0 36 .............................. TGAATTCACTGAATACGCAACTGAAACCAATAAGCC 184610 30 100.0 37 .............................. TCTTTTTCATAGATTGTTCCATCATTGAAGGTTATCC 184543 30 100.0 35 .............................. TATAAGTTTAGATTGCTTTTTAAGTCCTGTGTCTT 184478 30 100.0 36 .............................. CTATGTAATTTAATGTAATTAAGCAAATTGTCTTTC 184412 30 100.0 37 .............................. ACAAGTGCAAATGCCTTTGCATTCTTTAAATTCGGAG 184345 30 100.0 37 .............................. GCCGAATATTTTCTAGATAAAGAATATGAAAAGTATA 184278 30 100.0 35 .............................. GATGTTAATCCAAACTGATCCATCATCATTTTTAC 184213 30 100.0 36 .............................. AAAACATGTTACAGAAAGTCTTGATAATCTTGTTAA 184147 30 100.0 36 .............................. ATGTACTCTATTATTAAATCTAATTGTTGTTTCAAA 184081 30 100.0 35 .............................. AGTATATAGAAACCACACAAAACTTAACATTTCTT 184016 30 100.0 36 .............................. TATTGTTTACAAGTTCTTATAGAGAGGTTCTTCCTC 183950 30 100.0 35 .............................. ATGGAACAAAGATTGTATTACGTTAAAACATTAAA 183885 30 100.0 81 .............................. AAAAGATTGTTACANNNNNNNNNNNNNNNNNNNNNNNNNNGAAATTATTGTTTACAAGTTCTTATAGAGAGGTTCTTCCTC 183774 30 100.0 35 .............................. ATGGAACAAAGATTGTATTACGTTAAAACATTAAA 183709 30 100.0 36 .............................. AAAAGATTGTTACAAGATTCTAAACTTAATATATGT 183643 30 100.0 36 .............................. TTTTAATGTTCTAGGTTTTAATGTTGTGCTTAATTT 183577 30 100.0 36 .............................. TTAAAAAAAATGAATTTAACGCAAAAGAAAAAGGGA 183511 30 100.0 36 .............................. ATAATATCAAAAGAAATGTACGAGGATAGCATAGAA 183445 30 100.0 36 .............................. ACAATAAGATAGTCAAAATCTTTCATCCATCCAGTT 183379 30 100.0 36 .............................. GTATGAGTAACAGGAAGCATTTGCGTTTTATCAAAA 183313 30 100.0 35 .............................. TTTGATGTTGATCTGTCTTTTATGAATGGCTTTGC 183248 30 100.0 36 .............................. AGCACGTTCTTTAAGGCTCACAAGCGATATTATTCT 183182 30 100.0 36 .............................. ACATTGCACAGGCCACAACATCCGAATGGGAGAATG 183116 30 100.0 37 .............................. TATCTATACTGTTCGTTGTCTCGTTATAGACCTGTTC 183049 30 100.0 36 .............................. TACAATTTCATAATAAACACCCCTTTCAAAGTCGAC 182983 30 100.0 35 .............................. TTCGTAAGCATAACGCCACCCAATGCACAGAGCCC 182918 30 100.0 36 .............................. TTGCGAGATTTGCAACCCAAAGACTCACAAATACTA 182852 30 100.0 36 .............................. AGATAAGGTTTTAAACATTCCCTTTCATCTTTTTCA 182786 30 100.0 36 .............................. TATGCTTTATTATCTATATACATCTGTGGCTTAAAA 182720 30 100.0 36 .............................. CCAGCTTTGGTATAGTTTTGGCAATTTAAGCTGGCA 182654 30 100.0 36 .............................. AGACATGATAATGAACTCTACCGGACTTTTGAAATT 182588 30 96.7 35 ........A..................... GTATCTAAGATTTTAGAATGACGGTTAGCACCTCG 182523 30 100.0 36 .............................. GTTGATCCAGCAATCCCAATATAGAATCAAATCCTT 182457 30 100.0 36 .............................. AAACTTGAAAAAGCAAGATTTCTAAAGTGTACCAAG 182391 30 100.0 36 .............................. GGTTTTAGCAACAAATTCTTCTTTAGATAATCAGCT 182325 30 100.0 36 .............................. ACATTCAATCTTCAGGCCAATTCTTCAACCATTTCA 182259 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ================================================================================= ================== 37 30 99.9 37 GTTTAATAGCAACATATGATGTTTTGAAAT # Left flank : CATGCTGATGTTTTACATTGTGAACCAATTGAAAAAGTTGCTGAGGAGTTTATATTAATGTGTAAGATTGATAAAGGAGATTATGACAATGTTTCAGAATCTAAATATAATATTCCTGATTATTGGACGATTGGTGAAGTATATGAAAGGTTGATTGAAGATGTAGGCGGAAATGATATAATTGAAGTGTTAATGGTGGTTTATAATTCATGGATTAGTGAAGCAATTTCAAACTACAATTCTGATTTTTATTATCAATCAAGAGAGTATATTTATCAATGTTTTCATGATGGAGAAATTATTTAATGATGTATAGTTTATAAAATTTTCCCAAGTGATATTTTCATTGACACACAAAAAACAATGTAATTATCAATATAATTTTGATTTTTTATATAATTTTGCTAAACAGTATATTTACTTGGGAAAATATTGAAATAATGTTGAGTTTATCGTATTAATTTTATTTTCTTTGTTTTATAAGAGTTTATTTTCTCTAG # Right flank : AGGCTTAATTCTACCTTGGATAAATCCTCTGCCTTAAGTTTAATAGTAACATGTGATGAAAAAAAGTTTTTAAATAAACATTTAAAAATTATTTAGGAGGTGTAAAAATATGTTATAATATAGTAAAGTTGATTTAGTTTTATGTATTTAAAAAAATAGTAACAAAAAGAAATGAGGAATAATGATGAAAATTTATGAATACAAAGTGAAGATAAAATTAAAACAAGATTTAGAATATTCCCAATTGGCGGAAAAAACAAGTTATTATATTGATAGTATACTCACAGAAGATAATGAATTTCTATCATACCATACGGGTAAGCAATACAAAGGATATGTTCATGATTTGTTATATCCAATTGAAAATGCAGGTCTCTACAAAAAGAATAAAATATATACTATGCGAATTCGAATGGTTGAAGATAAGTTGGTTCAATATTTAATGGCAAAACTATCTTTTCATGAAACAAATGAATTTGAAGGTGTTGGTGGTGAGATTA # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATAGCAACATATGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.00,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //