Array 1 23763-25340 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMVQ010000035.1 Bacteroides ovatus strain D46t1_190503_G7 NODE_35_length_68644_cov_11.0369, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 23763 47 89.4 28 A.........A....T.........A..............A...... AGAAATTAAAAAAAAGTCAGCCAGCAGA 23838 47 100.0 30 ............................................... TTGACGGAGTAGAATTGAGTGCCGGAAAGT 23915 47 100.0 30 ............................................... TTATGCTGAATTAGCTGCTCTTGCTTCTGA 23992 47 100.0 30 ............................................... TTTCAGCGGCTTCATTTTCGGCAAGTTGTT 24069 47 100.0 30 ............................................... TAGAAATCCAAGAGGGTGAAACAATTGAAA 24146 47 100.0 30 ............................................... TGAACTTTTGGGTACAAACAAGATTTGACA 24223 47 100.0 30 ............................................... AATCAGGTTTTGTATTTCTTGCCATAAGTG 24300 47 100.0 30 ............................................... TTTCATGACTGTTATTATTTGATTGACGCA 24377 47 100.0 29 ............................................... CTTATGACAAAATTACAAGAAGTACAGCT 24453 47 100.0 29 ............................................... CTACAAACAACTAAAACAAAAATACAACT 24529 47 100.0 30 ............................................... AGCCGGACGAGGTGTAACAACAGGGCGCCA 24606 47 100.0 29 ............................................... ATCAACTGATGTATTGGCTGCAATACCTG 24682 47 100.0 29 ............................................... TCCCGGTAAATAGATAAAATTTCGTTCCC 24758 47 100.0 29 ............................................... CAGCCTTCAGGTGCAATGTGAACGTTACG 24834 47 100.0 30 ............................................... GACATACAGCGAGAGGTCTATGACAAGCAT 24911 47 100.0 30 ............................................... TATGAACCCTACATTTATGCTCGCTTCCCG 24988 47 100.0 29 ............................................... TACAAATTATGAAAATACCGTTAAGCACA 25064 47 100.0 30 ............................................... ATGAGACCCGATGGAATATCAGAAGCCTAC 25141 47 100.0 30 ............................................... TTTCCATAAGGAATCCTCTGCACTTTCGGC 25218 47 100.0 29 ............................................... CATTGATAATTTGTTTAAATTGTTATTAA 25294 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 21 47 99.5 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : AGGATCTCCTAGATGTTTTGTTATAATCTTATACTGTTTCATCGTCAAATAACGATGATTATACGGCATATAACCAGTCGGTACAAGCTCTTTGGTCAACGGGTTACAGTCTTTAATCCATCGGCTCAGACAACGCACTGCATTTTTACTGGTCGTACATCCGGGGAAGTACAATGCAGCTAATACAGCAAAAGATAAGATTCGTCTCATTTCGTTTTTAAAGTTTTAATTTGTCGTTTCATTGTTTCTTTCGTTCTACAAATATACAACATCAAAAAGCGTTTGTCAAGTCATTTGGGATTTTATCGTTAATATAAAGGAATACCCACCTTTATTAACCCAATTACTAAGCAATTGAAACAGATTGAGCATTCTCAATATTTAACGCTAGAATTAAGTCTAATGCTCACAAAAAGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATACATGAATGG # Right flank : TACATTTCATATAATAAGATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTCCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAAAACAATTCCAATTGCTGCCCTGGTGTATTGACACTCTGCGCCTTCTTTCCATAGAAAAGTTCTATGTCCCCAAATTGTTTATCCGTAATACACATGACTCCGACATGCCCTAGTTCCGGAAGGAAAGATTTAACTCTTTTTATATGTACTGCTGCATTCTCGCTACTAGCACAGTGACGTACATAAATGGAAAACTGAAACATCGTAAAACCATCTTTTTGCAGATTCTTTCTGAAATCCGCATAAGCCTTCTTTTCCTTCTTCGTTTCAGTTGGCAAATCAAAAAGAACGAGCACCCACATTATACGATATTCACTAAGACGATCCATTACCGTTCGGGATAGGCAACTCGGCGAAGCTCTCCATTGAAACATTTATAAAGTGAGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //