Array 1 232258-235409 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAIO01000013.1 Acinetobacter baumannii strain S36 S36_contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 232258 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 232318 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 232378 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 232438 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 232498 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 232558 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 232618 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 232678 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 232738 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 232798 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 232858 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 232918 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 232978 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 233038 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 233098 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 233158 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 233218 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 233278 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 233338 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 233398 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 233458 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 233518 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 233578 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 233638 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 233698 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 233758 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 233818 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 233878 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 233938 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 233998 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 234058 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 234118 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 234178 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 234238 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 234298 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 234358 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 234419 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 234479 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 234539 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 234599 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 234659 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 234719 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 234779 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 234839 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 234900 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 234960 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 235020 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 235080 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 235140 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 235200 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 235260 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 235320 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 235380 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //