Array 1 16183-17196 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNHD010000004.1 Ruminococcus sp. BSD2780120874_150323_B10 NODE_4_length_160696_cov_30.4113, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 16183 29 100.0 36 ............................. TTTGAATTGACACTTTTTGCAAACTTCTTCATCACC 16248 29 100.0 37 ............................. TGGCTTATCTGCTGGATTTTTGTTTTGGTGGAGATGG 16314 29 100.0 35 ............................. TTTTTAGTTAAAATTGTACACAGATTGAAAGACTG 16378 29 100.0 38 ............................. GTTGTTGTTGCTTCTTGCGTTAGTGCGTTTGCTGTATG 16445 29 100.0 36 ............................. ATGTTGCCTAGAACAATGTTAAATAAAAGGGTGAAG 16510 29 100.0 36 ............................. CCGAGCCAAAATTGCAGCTGTAATAATGATGTTTAG 16575 29 100.0 37 ............................. TTGAAGACTTGCAAAGTCTGCGAAAAACAATTGTGCG 16641 29 100.0 36 ............................. AGTGCATATGGTCACGGCGTAACTCTGAGAACAATG 16706 29 100.0 38 ............................. TCATCAAAAGGTACTATATCCAAGCAAGGGAATGTATG 16773 29 100.0 38 ............................. TGGAACAGACGGCTATACAGCTGAAATTATAAAATAAG 16840 29 100.0 36 ............................. GTTTGTAAGTCAGCTTATCAGAATTGCTAAATCTGC 16905 29 100.0 35 ............................. GCAAGGTTACCAAGGCGATTATAAAGCCAATCACC 16969 29 100.0 38 ............................. GCCAGACTTTTGCTTTAAATGTATGGGAGAGCGCAAAA 17036 29 100.0 37 ............................. CCGTTTTAGTCACTGTTTTGCTGGATAAGGGTGTCTA 17102 29 100.0 37 ............................. TTTTACGCATAAGCCTTGTATAAGCCTTTTTCAAAAA 17168 29 86.2 0 .......................GA..TA | ========== ====== ====== ====== ============================= ====================================== ================== 16 29 99.1 37 TTTAAAATCCAATATGGATAGATTTATAG # Left flank : GCAACGAAAAGGATCGTTCACCTTTCGCTGCTTTTGAAAGACCTTTCACTATACTAACAACTCAAAACAGCAAAATATCCCAAAATCTTAAAAAATTTTTCACTGTAATAACAATACCATAGAAAAGCTGATTTCGCAACAGAAAACGCCGCCAAGCAGGAGATTATCGCACGTGGCGGCTGTGCTGGTTAGTTGTAAATCAACTCTACATTTACAATCTCCGTTGCACGGTTGCGGATATTGTTCATCTTCCGCACCCACAGCATTTGGTTTTCTGATTTGAGTTGTTCGGTCACGCCATCACGTTCTGCCATCTGTTTTATGAGCCGAAAAAACATATCCTCAGCCTGTTTATTTACATCGGCAAGGTGTCTGTTCAGTTCGCATTTTGTGAGCAAGGTCGTATAAAAACCTTTACGGTGCGCCTTGATATACTGCAAGTGCCGCTGTCCCCAAATACCGACTTCGACTTAATCCCACGCCCGATCCTGATCCCGAAA # Right flank : AAGGTACAACTTTTACTCAAGGCTTATCATACCAATCCTGTGGTAAAAGATATTAATTTGTTGATTGCGAACATTGTTAATTTTTTCTGTTTCAAATACTACGATTTTTTCAATGAAATCATCTATGACTTCAGGTGTTAATTCGGACAATGGTGTATGGTACTTATTAAGCATCTTTATGAAATTTGAAATTTCTACTTCTTGCTTATTAATAACTACACTTTGTCTTGAACCGTCAATAATGAGTTTTTGCAACTCAGCTTTTTCAATACAAAAATTTTTGTCACACATTTGAAATGTTTCAAGAGTAATATTGCCTTTGACCTTATCCTCGTACAAATTAATAAGAATTTTATCAATCTCCGAAATGTGATTATTAGCATTTTGGAGATTTTTTTCGTTCTCAATTTTTTGCTTTTGAGCTTCTAACTGCTTTTTCGTTTCAATCAATGAAACAAGGCTTTTTCTATCTGTCGTAATAAGAGCATTTATGCTTTTTA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAAATCCAATATGGATAGATTTATAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 52137-60000 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNHD010000004.1 Ruminococcus sp. BSD2780120874_150323_B10 NODE_4_length_160696_cov_30.4113, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 52137 30 80.0 36 T.....C.A.G.T.C............... AATTTTGTATAATATTAATCAACTTCTTGGATTTAT G,TG [52141,52149] 52206 30 100.0 37 .............................. GTCTTTATTGTGGTCGCCAAGGGGCAGGGAAGACGAT 52273 30 100.0 35 .............................. TTTAAGGAGGTTTAAAAAATGCAGTATATTTTTAC 52338 30 100.0 35 .............................. GTAATACTTAATACATGCTTGAGTAGCATTTCCTT 52403 30 100.0 37 .............................. GATTTGCAATATGATTTGATGATGGAGAATTACTGAT 52470 30 100.0 36 .............................. ATAATTGTGTTTTTTGTGTAAAATATTTTTAAAAGG 52536 30 100.0 35 .............................. AAATGAAATGAGGTTTATATATGGGATTTATTGGT 52601 30 100.0 37 .............................. GTGTTTAATGTCATATTCAAGCAATCCTCTAATCTGA 52668 30 100.0 37 .............................. ACGATGTCGATTTCAATAATCGTTATTTAGTAATTAA 52735 30 100.0 36 .............................. TCGTCACCTTTGGTGCTTAAACCAGAACCAAAAAAA 52801 30 100.0 37 .............................. GGCAGTACGATGATAGAGATTATTGGTTCTGATATTA 52868 30 100.0 35 .............................. TGATTGGTCGTTAATTGTTTTTACCTCTTTGCGTT 52933 30 100.0 36 .............................. TTGTGACCCGTCAATCGGTGTTACTGATGATTATAT 52999 30 100.0 36 .............................. CAATCTTTTTTGCATTTCTCCTGCGGACGGTGTTGT 53065 30 100.0 37 .............................. GCAGCTGAACGCAATAAACAAGATGAGATTTCTCACT 53132 30 100.0 36 .............................. TTATGAAGAACAAATAAAAATTATACGATTTTTTAC 53198 30 100.0 36 .............................. TAGTGATTCTATGTATAGTCTTAATATTGATTCAAT 53264 30 100.0 37 .............................. GTTTTGCACTTTATACTTGTTTATCACTTTTATCTTT 53331 30 100.0 36 .............................. GTACAGAGAGACATTCTCTAATATTTCTATACATTT 53397 30 100.0 34 .............................. CCTCTACATACAATCCAATCATATTATCAAAGAG 53461 30 100.0 35 .............................. AAACACATATTCAAATAGTTGATGTCAATGTTTTT 53526 30 100.0 36 .............................. CAACTTTTGCACAATGTTAGTTGCTACTTGAAGAAT 53592 30 100.0 35 .............................. TAACGGAATTTTTCATGCGAGTTTCGGTTTTTTTG 53657 30 100.0 36 .............................. GTTATCGGACTTATAACCGCAAAGGCATTTTCTTTT 53723 30 100.0 37 .............................. TAAATGTTTCAACTGCAAGTCCTACTACATCATCTTT 53790 30 100.0 36 .............................. TATAGGTTCTATGGTCTGTGATGACGGAACTATTTA 53856 30 100.0 36 .............................. AGATTATTTTAAATTATATGGTTTGCGTTTGTATTG 53922 30 100.0 36 .............................. TGATAAATCTTCTGAATCTAATTATATTTATACTTC 53988 30 100.0 36 .............................. AATTAAATCGCCACAAACAAATGTTCCAGAAAATTA 54054 30 100.0 35 .............................. ATATTAAAACTTTACAACGATAAAACAAAATTAAA 54119 30 100.0 36 .............................. TAGAGCCGTTTTGTCAAACTTTTGCGTTAAATGTGT 54185 30 100.0 34 .............................. ACTCAATGATTTTTAATGTTTTTTCGTTTTTTAA 54249 30 100.0 37 .............................. CTCCCTGCTGATATGTAAGCCACGCAAAGGGGTCTTT 54316 30 100.0 36 .............................. AAACGGGAATAATCTTAAGTCTATTAGAGCATTCAT 54382 30 100.0 36 .............................. TTTTGTCAGTTTCCATGACGGATTTTCTTCAACGTC 54448 30 100.0 35 .............................. AAATATTGCTGAATATCAATCAATGTTTGCAATGT 54513 30 100.0 35 .............................. ACGTGAAACACTTTTTAATAAGAAAGGCTAAAATA 54578 30 100.0 36 .............................. AGCCGATTATAATGTTATAATCGGCAAGAGAAGTAA 54644 30 100.0 37 .............................. ATTATTTTATAAATCTGAATAGTTGCGACAACAAAAT 54711 30 100.0 35 .............................. TTTTAAAAAAATCAAGTTACAATTTTGTAACCAAA 54776 30 100.0 35 .............................. ACTTGTTGATAATCTGTTCACTGACTTAAAAAATT 54841 30 100.0 36 .............................. GCTACAAGCATATCCGACAGTTGCGCCGTAATTTTC 54907 30 100.0 36 .............................. CAATCATTGACTGATAGTTGCTCGTAAGGAGTGCCG 54973 30 100.0 36 .............................. CATATCAACTAAATGCAATAGTTAATATGTGAACTA 55039 30 100.0 35 .............................. AGTGAATAGTAATACTATTACTATAAAGACGCTTT 55104 30 100.0 35 .............................. CTGCTGAGCGTAACAAGTCGGATGATATACCGCAT 55169 30 100.0 35 .............................. TTGCGAAGTAATGACACAATGCAAATATTTGTCAG 55234 30 100.0 36 .............................. TCAATATACTTCCGATAATATGGTTTACTTTCGTTA 55300 30 100.0 37 .............................. ATTGAAAAGATTAACGAAAGAAATCTTGTTGAACTCT 55367 30 100.0 35 .............................. TATTGTTAAATCTTACTAATAAGGGGACATTTTTA 55432 30 100.0 36 .............................. AAAATCTGTAGTTTATCTGTAGTATAAGAGATTAAA 55498 30 100.0 37 .............................. CATTTCTTTTTACGATTGTATATTCTAATGTTCCATT 55565 30 100.0 36 .............................. TGTACCAATACACTCCGATTTTTAAATTTGCGTTTT 55631 30 100.0 35 .............................. CCGTCATTATTTATGAAGAAGTACTTAGAATTATC 55696 30 100.0 35 .............................. TACAGATACAAACAGCCTTGAGCATATCAGAGCTA 55761 30 100.0 35 .............................. AAAAGAGAAAAATCGTTGAGCATTGTCAACTACAA 55826 30 100.0 36 .............................. ACGGTTTATATAATTCTCGATATCATCAAGTGTTTT 55892 30 100.0 35 .............................. TCATTTTGTTGCCTCCTTGATTGAATTTTTTTTAT 55957 30 100.0 35 .............................. GTGATGCACCGCTTCACAGGGGCTATATTTTCCTA 56022 30 100.0 35 .............................. CTTGTAGAGCGTATGAAATCCTCATCAGTTAAGGC 56087 30 100.0 37 .............................. CACAATTGCGAATCGTAATGCTTGCGCCTGTTTTAAT 56154 30 100.0 37 .............................. ATGTTTGAGGTAATGTGCGTTACCTCTGCTTCAAGAG 56221 30 100.0 35 .............................. TTTTAGCAAATTCAAACTGTTAATCATGATGTCAC 56286 30 100.0 35 .............................. TATGCCTTGTCCTCTGCAAGCAATAGCTTATATTT 56351 30 100.0 36 .............................. TGAATCATAGAAAGCTGCTTTAATATCATCAGTTGC 56417 30 100.0 37 .............................. GCTAATCGACCTCGACCAGCAAGCCAATCTATCGTTT 56484 30 100.0 36 .............................. GTTAAAATCAATAAAACTTGAAGTAGTCGCAACAGA 56550 30 100.0 37 .............................. AGCAGTTACTTAATTCATTCGAACCTTTAACATTTCT 56617 30 100.0 37 .............................. TTTAACACATCATTTTTTGATAGCTCTGTATTTATTA 56684 30 100.0 36 .............................. CAATAAATTCTTTGCTTTCTCATCCTCATCAACAGG 56750 30 100.0 35 .............................. GTTTTATTAATAAAAAAATCACCTTCAATTTTAGA 56815 30 100.0 36 .............................. CGTCTGGCAGGATTTTAAAAATCTTCTCACTATTAA 56881 30 100.0 35 .............................. CGTTCGGTGTTTACATTAAATATTATAACACCATA 56946 30 100.0 36 .............................. TCTGAACTGGGTTGAGTAGTTGTTCCAGCAGAGTTA 57012 30 100.0 35 .............................. TTTGACACAACGATATTTGTAGTATTAAGTTGCTT 57077 30 100.0 34 .............................. TCTTTAAATCTTTAATCTTGTATCTGACAAGTTG 57141 30 100.0 36 .............................. CCGCAAGTCAAAAATATTGTGCCAGTTGCCGTGCTG 57207 30 100.0 35 .............................. AAAACCAAGATTATCGACAGAATTAACCTTGTGCT 57272 30 100.0 37 .............................. AAGTGCAATAGTGGACGAATGTTGGGATGTCGTTTAT 57339 30 100.0 35 .............................. GTTGTCTTGCTGTTGAAAAATTTTGCCTTTACTGT 57404 30 100.0 35 .............................. TCGCCTGAAAGAGCAAGAGGGTGCTCTTTCAATCT 57469 30 100.0 36 .............................. TCATCATTACCCCACGATAACCGATTAATTTTACAT 57535 30 100.0 37 .............................. TTATCAGCTTTCCTGACGACGATATTCCCAACATCAC 57602 30 100.0 36 .............................. AGCCGTCCTTTTCAGGATTGAATTTGTTGTAATTGA 57668 30 100.0 35 .............................. TTAACTGAAAATCTTTCTTTGTGTAACTTTCAATT 57733 30 100.0 36 .............................. TGCAGAGATATACTCTCAAGTCATATAAACTTATTT 57799 30 100.0 36 .............................. CAAGAAAACGGTTTTAACGCAAAGGCTTTTTTGAGT 57865 30 100.0 37 .............................. TTTCGCCTGAAAGAGCAAGAGGGTGCTCTTTCAATCT 57932 30 100.0 36 .............................. TTTTGAAAAACTTTCGGAAATGCAGAAGAGAATCAT 57998 30 100.0 35 .............................. ACAAATATAACTATAATCAATTTTTGCTATATTCC 58063 30 100.0 36 .............................. TACAGTTAACAAATATTGTATATATTTTTCAGAGAT 58129 30 100.0 35 .............................. TATTTTATCAATCTGAGCAGTTGCGATAACAAAAT 58194 30 100.0 35 .............................. TAATCGCCAATAAAAAATCCTTCTTCCGTTTTTAA 58259 30 100.0 36 .............................. TATTGATAGAAAGCAAGCCGATTATAATGTTATAAT 58325 30 100.0 37 .............................. CCCGTCATATTTACATCAACGGCGCAATTTCCCGTTT 58392 30 100.0 35 .............................. ACAAGTTCAAAAGTCTTTTTGATTGAAATTTTTTT 58457 30 100.0 36 .............................. AGAAAATTGTTATGCTATCGGAATTTGACAAGTCAG 58523 30 100.0 36 .............................. AAAATATTGCTGAATATCAATTAATGTTTGCAACGT 58589 30 100.0 36 .............................. TATACACCATCGTTAGTTTATGAAGCTATAAGCGAT 58655 30 100.0 35 .............................. CCTGTCCAAATATATCATATGTTTAACTTCTTTGT 58720 30 100.0 37 .............................. ATTTCAACACCCGAGGCGGTTGTTTTCAGTTCAGGGT 58787 30 100.0 36 .............................. CATTGGGTGTACATCTGCACCGCATTTTTCACACTT 58853 30 100.0 38 .............................. GCACAAGGCACATATACAGATCTGCAAGATAGATACGC 58921 30 100.0 34 .............................. CAAATGACAAGGGATATATAGTAAAATATTCTGA 58985 30 100.0 35 .............................. GACATTCGGGTAGAGAATGTTCGTCTGCAGCTGTG 59050 30 100.0 36 .............................. AGCAAATCTTGTCTTTGCTCTGTACCCATTACCTTC 59116 30 100.0 36 .............................. GTTGCGTCAATGTTCTCCCAGCGAGCCATCATCGGC 59182 30 100.0 36 .............................. CTCGATGCGGATATGATTTTCCGACAGCAGAGCGAA 59248 30 100.0 36 .............................. CGGCTACACTCAAGTATGCACACTTGGTGACTTTCT 59314 30 100.0 37 .............................. TCTGACCTGCTGGAGGCGTGCAGGTGAGAATACCTGT 59381 30 100.0 36 .............................. TTAGTGCAATTTCCGTAAAAATTTTCTGAATTAAAA 59447 30 100.0 35 .............................. AATTATAGGAATTTCGTCTGAATCTTACGAATGAA 59512 30 100.0 35 .............................. TCAAATATTGCAGGACGAAAGAAACAAGCTATTTC 59577 30 100.0 36 .............................. CAAAGCTGCAGGTAAATGCCTTGGCGTAACTATCAA 59643 30 100.0 35 .............................. GATTGAGGAATTGCTTCCGTTTATAGCTCAACTTA 59708 30 100.0 36 .............................. TCATTGTTGAGCGTGAAATCTTTGAACACCTCAAGC 59774 30 100.0 36 .............................. ACAAGGCACATATACAGATCTGCAAGATAGATACGC 59840 30 100.0 36 .............................. ATATTAAGGAGTTATAATTATGAAATGTTCAGTTAT 59906 30 100.0 35 .............................. TTTGCTATGCTGTGCGTAAAATGTATATGTAATTT 59971 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 120 30 99.8 36 ATTTAAAATCCAATATGGATAGATTTATAG # Left flank : TCATATTCTTCTATCCTTCTATCAAGTTTTTCAGAAGTCGATTCTGTTGCTGTATCAGCTTGATTGATAGATGGATTAGTATGGTTTAACTCAGTATGGATATAGGTCGAGATTTCCGATGTCCTGACATCGTTTTTATCAACTTCAAGAGGTCGATTTCGATTTTTCAGAGGTCGATTTTTCCGACCTCTGGGATGTTGGTTCATCTTTTTGAGCCGACTTATCAGATTTTTGCTGAGTTTTTGTGCTTTTAGTAAGAGCATTAATCTTGCAGATAACTTCATCTTCATCATCCGATTTATCTATTGGCTTTGCGAAATTCATAACAAAAATTTTAGTAGGCTTACCTAATCCTTGCTTTTTGCGAATTATAAGACCAATTTTTTCAAGCTCACTAAATATACGCATAGCTTTATCTCTGCCAATATTGAGTTGCTTCTGCACAAGCTCTTGCTTGTAGTAAACAAATGTTATACCGCTTTTATCTATCCAACCGTTCT # Right flank : GCCGTGGGATAAAAGGATAAGTAATCATCGGCATTTTTCTGTGCTGTTTTGTCGATATACCAAATATTTATCAAATACTACTGCCATTTCAATATATCAAAAGCAACTATACCGATGATTACTTGATTTTTAGGTTCTGTCAACCTGCCGGGGGTTTTGTGCTATGTCAGGTCGACAATAAAAGCGTTACAAAAAATTTGATGTTTTATCATCCGTTTTTCCAAGAAAATCTTTATTCATCCACCGTTCTTCACGGGTATGAAACATTATTACCGAATCCTTGTCTTTTCTGATATAAACATCAAGTTCTTTTTGCAAAGCAAGTGAGTTTGCTTTACTTAAGTTTCCTTCAAAAACAGAGTTTTGAATATGTACAAGATATTTTTTGCAAATCTTAAATACCTTTGGAAGTATTTTTCTGCCCCTTTCATCACATATTATATCATATACAAGAATTACATACAATATTTACCACCACATTTCAAAGCCTTTATATTCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAAATCCAATATGGATAGATTTATAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //