Array 1 5228-336 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZVM01000006.1 Aeromonas veronii strain WB12 Scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5227 28 100.0 32 ............................ ACCCGGTTATGGCGCTCGCCAACAAGTTCGAC 5167 28 100.0 32 ............................ GAGCACGAACAGCCAGAAAAGGGCGACAAGGC 5107 28 100.0 32 ............................ ATCACCGAACCGTAACCGGGGGCTATATGGCC 5047 28 100.0 32 ............................ GTAACAGCAAACACCAAGCACACCGTTTCCAC 4987 28 100.0 32 ............................ AGAATCCATGCGCACATCTCCAGCATCATACA 4927 28 100.0 32 ............................ AGAATCCATGCGCACATCTCCAGCATCATACA 4867 28 100.0 32 ............................ AGAATCCATGCGCACATCTCCAGCATCATACA 4807 28 100.0 32 ............................ AGATCGCGGTGCAGCGCTGGACGATGACCGGT 4747 28 100.0 32 ............................ GGCAGGCAAACAGCGGTCTGTTTGCACTTGGT 4687 28 100.0 32 ............................ GCGAGCCGTGTTCTTGTTCGGGCCGTATGATC 4627 28 100.0 32 ............................ GCTACCTCAAACTTGTCGGCGAATCCCTCCGC 4567 28 100.0 32 ............................ AGCTCCGGTATCGACCAGCTCTACGGTCGAGG 4507 28 100.0 32 ............................ ACTGACGGGCGTGAAGGTGGTCGAGTACCGCC 4447 28 100.0 32 ............................ GTCCTGCATCGACTCCTGGGCGGCGTTGAACT 4387 28 100.0 32 ............................ GATAAAGTAGTGCTGTCGCTGTTTGACCTGAC 4327 28 100.0 32 ............................ TTGCCGCAGGATGTGGGCGGCTGTGGTGGGCT 4267 28 100.0 32 ............................ AGCACGGAGCGGGCAATGCCCATCTCGTGGCT 4207 28 96.4 32 A........................... CGCACCCGCTCCCGCGTCCATCCAGGCTTGCC 4147 28 100.0 32 ............................ TATTCCCGGCCCCATCTAACGCCAATGGCATC 4087 28 100.0 32 ............................ TTGTTTGGCGCTGCCGGTGGCCGGCTGGCGCA 4027 28 100.0 32 ............................ AGCTACGAGTGGGCGCGGGCGCAGATCGCCAC 3967 28 100.0 32 ............................ AAAGCTCTGGCCGAACCGGCGGGTGGCATCCT 3907 28 100.0 32 ............................ ACTGAGAACGGCATCCCGATGACCATGGTCTA 3847 28 100.0 32 ............................ TGAAACGACACAGGCCGACTGTGAGAGAGTCG 3787 28 100.0 32 ............................ TGGGGGCGCATTGTTGACCGGGATGGCACATT 3727 28 100.0 33 ............................ ATCGACTATGGCCGTGGCCAGCTGGAGTTCAAT 3666 28 100.0 32 ............................ CTGGCGCAGCCCTTGGTCCTGCCCGACGCTGA 3606 28 100.0 32 ............................ TTGAGCATCTGCATCAGGGCGTCGCGGGTGCC 3546 28 100.0 32 ............................ TCGCAGATCTCGACGTCATAGCGCCTGATGTA 3486 28 100.0 32 ............................ GGGAAGCCGGCCAGGCGCTCGGCCAGTATTGC 3426 28 100.0 32 ............................ GATCTGGACGGCAACACTGTCGCCAAGTCCAA 3366 28 100.0 32 ............................ TCGCCAAGTACACCACCGAGTCAGGGCGCCTG 3306 28 100.0 32 ............................ CGGGCCTGATGACTCCGTCTGCTGGCTACCGC 3246 28 100.0 32 ............................ AAGGATCTCTTCGTCGAGGATTTCCACGCCGA 3186 28 100.0 32 ............................ CTCGCCATGCTTACGGCCAAGCTGCATATGAT 3126 28 100.0 32 ............................ TCAAACATTCCCGCATACCGGCTAATCACACC 3066 28 100.0 33 ............................ TTCTTAGGGCTATTGATGGCGGGTCTCCTAAAT 3005 28 100.0 32 ............................ CAGGCGCTGCTCGATCACTTCGGTATCGAGGT 2945 28 100.0 33 ............................ ACGTCGCGGGCGTAGCCGTTCGCCACGTTGACA 2884 28 100.0 32 ............................ AACGTCACCCGATGCCGCCATGGCCATCAGTG 2824 28 100.0 32 ............................ ACTGCCAACCCATCGAACCGGTAGGGTTGATA 2764 28 100.0 32 ............................ ATGTATTCCCGGGTGAGCTTGCCCTGCTCTGA 2704 28 100.0 32 ............................ GTCAATGAGGAGCTGGGGCAGGAGATCGATCT 2644 28 100.0 32 ............................ TGGAGGGGCTGCTAGACCAGCTTGCGATATCA 2584 28 100.0 32 ............................ TTGAAGATTAAGAACGTTCAATGCTTCTTGTG 2524 28 100.0 32 ............................ TTTGGTACTGTGCCGTCACCAGCATGGCCAAG 2464 28 100.0 32 ............................ GCCAGCGAGCAGAGCGTGAAGCGGCAGAGCGC 2404 28 100.0 32 ............................ TAGCGTTTACGGTGGCATGTAGAGTTAAAGCG 2344 28 100.0 32 ............................ TCAAAGGATTGGCAGACAGCAAGTATGCTGAT 2284 28 100.0 32 ............................ GCAAGGGGCTGGCCAAGGTGGCGCGGGCCAAT 2224 28 100.0 32 ............................ AGGGTGTGCTAGGGGCCAGTGAGCAGATCGAC 2164 28 100.0 32 ............................ GCTGAGGGTAGCACCTCTGCCAACAAGGCCAT 2104 28 100.0 32 ............................ CCAAGCCAACGCTGGCATCGTGCGAGTATGAC 2044 28 100.0 32 ............................ AAACAGACACGCCAGAAAGCGGCTTGCCGCTC 1984 28 100.0 32 ............................ AAGCAGAAGCAGAAGGCGAAAGAGGCCAAGGC 1924 28 100.0 32 ............................ CGGTCGGTGACGTGCAGAAGGCCCGCACCGCG 1864 28 100.0 32 ............................ GGCCAGCTGGATGAGGTATCCCAGGAGCGGGA 1804 28 100.0 32 ............................ ACGGCCGAGCGCCGTGGGTGACAGCGCCACCC 1744 28 100.0 32 ............................ ATTACGCCGAGGGCGGTTCTACGAACGTGAAT 1684 28 100.0 32 ............................ ATTTTAACTGGGTCGCCCTGATGCTCCAATAG 1624 28 100.0 32 ............................ TAGGGCAGCTCCTGCCCCACCTAGGGCAGCTC 1564 28 100.0 32 ............................ ATCGATTACCTCTGCTGCGGCCGCTAAACCAC 1504 28 100.0 32 ............................ TGCAACGTGGCGGCCAGCCTGTCGAAATCGTC 1444 28 100.0 32 ............................ TCGACGTAGAAAGCAGAAGCGAGCTCGACCTC 1384 28 96.4 32 ....A....................... TCACGCCGGGATCGGTGCGGGTCAAGTTCAAC 1324 28 100.0 32 ............................ ATCGAGGACGCCATCCGTCTTGGCTGCAACCT 1264 28 100.0 32 ............................ AGCATCTGCCCGAACTTCAGCAGGGCCAGTGC 1204 28 100.0 32 ............................ TGCGCCAGTCGCAAGACATCGACAGATGAGGA 1144 28 100.0 32 ............................ GACAAGGGGGGCGAGCTGGTTGTTGCCGGGTC 1084 28 100.0 32 ............................ GCAGGTATCAAAGCCTGAGTACGCGCCAGAGC 1024 28 100.0 32 ............................ ACCCTGTCACTGTAGGTACGTAAAGCGCTGAC 964 28 100.0 32 ............................ ACGGCCACTTCATCAGACAACAGGTGAGGCTC 904 28 100.0 32 ............................ AACAACGCCCAGGGCAACCTGCAGGATTCTGC 844 28 100.0 32 ............................ GAGGAGTCCATGTTGATCGGGTCGTCCGCGTT 784 28 100.0 32 ............................ ACTCGGCTATTTCTTTTGCCAGCGCAACCTCA 724 28 100.0 32 ............................ TCCGAGATCCCCGAGGGTGAATGGCTGGCCCT 664 28 100.0 32 ............................ AGCAGTAATACCGCCCTCGGACTCGATAATCT 604 28 100.0 33 ............................ GACCACGGCGTCATGGCGATTGATACCGCTGTG 543 28 96.4 32 .................T.......... ATCTGGGAAAAGGCGGCCGAAACTACCGGCAT 483 28 100.0 32 ............................ TGGGCGAACGGGTGATGATGACTCCGAGCGAT 423 28 100.0 32 ............................ AGCAGGATGACAGTAATGGTCAAGGAACCACG 363 28 82.1 0 ...........G.....T...C.G..G. | ========== ====== ====== ====== ============================ ================================= ================== 82 28 99.6 32 CCTCGCAGCCGCACAGGCTGCTTAGAAA # Left flank : CTGGCTGACTTGCTTAACCTCACTGAGGTGAACTGGTTGCAAGGGATGCGTGATTATATCCATATCGGGGAGCTTGCCACGGTGCCTGAGGGAGCCTGTTTTAGGGTTGTAAGAAGGGTCAATGCCAAGAGTGCTCGTAACAAGCGCCGTCGTTCTGTGGCAAAGGGTTGGTTGACCGAAGAGGAGGCGCTGAGACGCATCCCTGATACTCAGCAGAAAGTAATGACACTTCCTTATGTCGAGATGCACAGTCTTTCCACTGGTAGCAGGATGAGGCTTTATATCGAGCACGGCCCCTTGCTCGATATGCCGGTGGCTGGTGAATTTAACGCATATGGATTAAGTGCCACGGTTACCATTCCCTGGTTCTGACCCTATTTTCAAGGGTGTAGCTAACACATTGATTCCAGGTGTGTTCTACGCCCTTGCTCGAATAGTGTTTTGTGTATAAAGCTAACCGAGTTCTTTAACAATCAATTAGATAGCACTAACGTGCAACA # Right flank : ATTGTTGAGCGATGCAGCTATATCAATAGGGCTCTAAGCTGTTGAGGATACGGGATGACGGCAATATATAGATAACTCAGAAAGCGCCAATAAAGGCTGTCCGGTGCACATAGCCATCTATCGGTCTTGTTGGCTTCGGTCTGCCCAAGTTTAATGGGTCCGGGAGGGTGCCCGGTTGTGACCTCGGAGGTAGCAAAGTATGTACCTGTTTATCAGATGAATCAGTCATAGACGGTGAGCTACGGCAAGACCCGCAACATGACGGACGAGTACATGCAGGGGCCGATGGTGGTCGGGGTGCGTATTCCGGCGAAGTTGAACAGCCATTCCGGCCAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCAGCCGCACAGGCTGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAACAGCCGCACAGGCTGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //