Array 1 182205-183217 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTNG01000002.1 Acidaminococcus sp. AM33-14BH AM33-14BH.Scaf2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================ ================== 182205 35 100.0 26 ................................... CGGCACGCTTTCCGGATCCAGCTTTA 182266 35 100.0 27 ................................... GCAAAGATGCCGATTTCCCTGGAAACA 182328 35 100.0 26 ................................... TCAAAACCAGTGCCGGCGAAAAGATT 182389 35 100.0 27 ................................... GCAATCCGCTTTGATAGTAATTGCCGG 182451 35 100.0 27 ................................... TTAAGGCAAGAAATAGTAGCAATCAGC 182513 35 100.0 25 ................................... AAAAAGGTGTTGACATATACCGCCA 182573 35 100.0 27 ................................... AAAAATACATTCGGGGACACGGCAGAA 182635 35 100.0 26 ................................... TCTTGTGCGTCACCAGCGCCAATAGA 182696 35 100.0 26 ................................... AAGGGTTTCCTTACGGAGCTTCTTTT 182757 35 100.0 26 ................................... ACCGCTATTACGTCAAAAAAGGCGAT 182818 35 100.0 26 ................................... TCCATCAGTTCTTTCCCTCCTTTTCT 182879 35 100.0 26 ................................... TAGATCGATTTTTTCAAACTCAAACA 182940 35 100.0 27 ................................... GGAAAACGTACCGGGAGCCTTTTCAAG 183002 35 100.0 26 ................................... AACTGTGTGGCGTCCTGGGCGTGGGT 183063 35 100.0 28 ................................... TGTTTCTGAGTCTAGCGAGCTAAGAAAA 183126 35 94.3 23 ................................A.C GATAGCCATTGCTCCAATGCAAT 183184 34 71.4 0 .C.....C.-T.....GT...TG......T.G... | ========== ====== ====== ====== =================================== ============================ ================== 17 35 98.0 26 GTCAAAAGACCTTTTTAATTTCTACTCTTGTAGAT # Left flank : TTTTAGACTACAAACGTGACATTTTCTTGTATATCCAGCAATATTACAGGGCTTTTATGAAACACAAAAACCCTGACGAGTTTCCCCTCTTTATAATAAAATCATGATTATCCTAAGCTATGATATTTCAGATGATAAACTGCGGGCACGTTTTGCCAAATATATTCTAAAGTTTGGTCATCGCATCCAATATTCAGTTTATGAAATTGATAATAGTAAGCACATATTAGATAATATAATTTGCGAAATTCAGAACCATTTCATGAAAAAGTTTGATCAATCGGACAGTATCCTCATCTTAGAATTGACTTCATCGTGCAAAGTAATTAAAATGGGATATGCAGCTAATGAAGACTCTGATATGGTCATTGTCTAACCTGCAAACCTCCAACTTACTATTGCTAAGGAGTATATATTTTGTATAAAAGGTCTTTTGTCAGCATATTTTTTCAATATATGGTCTTACTTGGCGCCAAAAATGCATTCATATGCAGATAGGG # Right flank : TTTGAATTTTCCTTTTCCTATCACGCCTTTATCTATTCAACAAAACCCTTTCGTTCTTCCTGTAGCGGAAGGGCCTTTTTCGGTTCTTTGTCAAATTTTGGGGTGCTAAAGTGTCTATGCACTTCTGGAGAGGACATGCACTGAATACAGTGCGTGTCCTTTTTCGTTGCGTGTGTTAATGTACAAGCTCCTATGACGAAAGCGCTCAAAATTGCGCAGACCAAATGAAATCCGTTTCAATACCTTGATTTTATTGCTGCAGCCTTCAGTAAAACCGTTGGAGTAAGGATATATAAGGGCGCTCCTGATTTCTTCGTACCAATAGGTAAAGGACTTAACCAGAGAGTTCATTTCCGGTAAATCAGCGCTTTTTACTAGGTTTCTCCATGCTGAAAGTGCCCAAGAAATGTTGGCATGATCTTTGAATCGAAGCACCTTGGAAAATGCGTATTTTAGCGCGTAAGCACATCTTAGACGAGGGAAGCAGCGAAGGATTCCCT # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.19, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAAGACCTTTTTAATTTCTACTCTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 96090-98808 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTNG01000010.1 Acidaminococcus sp. AM33-14BH AM33-14BH.Scaf10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 96090 33 100.0 34 ................................. GCGTGATGTGCGAAAATCTCTTGAAGCGCTATCC 96157 33 100.0 34 ................................. TTGAAAGTATATGTTATTATATAGACAACAAAAG 96224 33 97.0 34 ..............A.................. CAAAAAACGAACCAAAACAAATGTACCCATTTTG 96291 33 100.0 35 ................................. CAAAGCCGGGAGATAGTCCGTGAAGACAACCTGCT 96359 33 100.0 33 ................................. AGGATGGCCTTGACTGCAAGTTTGTAGAGAAAG 96425 33 100.0 33 ................................. CCGCATTTGCCCATACTCATCAAGGACGGCCCC 96491 33 100.0 35 ................................. GCTGAGGCCTGTGGAACGACTGGGGGCTGAGCGGG 96559 33 100.0 33 ................................. ACGCTTGTCAGACGCGGGCACGAGCGTAGGCTT 96625 33 100.0 34 ................................. TCGTCCCCCAAAATAGTCCAGTCATCGTTTATAT 96692 33 100.0 35 ................................. CAGGCTGCCAAAGTACTGCAGCGCCTCCCGGTCAC 96760 33 100.0 33 ................................. TACAAATGGAAGCGAACATTGCCGCAGTTTGCG 96826 33 100.0 35 ................................. CAGCCTCGTTCCTTGGCCATCATGGTGATGGTGGC 96894 33 100.0 34 ................................. CACGTCGACTACTACGATATCGGCCTGAGCCTTG 96961 33 97.0 35 ..........................G...... ATGGGGATGCGCTTGAGCTACTTAGACAGCTTGAG 97029 33 100.0 34 ................................. TTGCGACGTTGGCGTCCTCGTTGCAACAATAGTC 97096 33 100.0 34 ................................. ATTTTCACGACTCGTTCCCGAGAACTAAGTTTTC 97163 33 100.0 33 ................................. TAGCTGTCATGGGCGTTGCCATGAAAGTCCCGA 97229 33 100.0 34 ................................. CGGTATAGTTTTTTCCCATAAAACCGCCCAAAAG 97296 33 100.0 36 ................................. CGCCGCTCTATCAAAATCAATATTTTTACGGAGATA 97365 33 100.0 34 ................................. CGGATGATATGATGGCTGAAATTAAATATCCATA 97432 33 100.0 34 ................................. TTTGCTGGTCGGTTGATATTTTGCTGGCACGCTA 97499 33 100.0 34 ................................. ACAATCACTGAAGCCCTTGAAAATTGGCGCGCTG 97566 33 100.0 35 ................................. GTATTCGTCCGCCGTGACAGTTCGGTCAAGGGGGA 97634 33 100.0 34 ................................. AGCGTGCCCGGCCCTAAGTGATATCGGGCTGGGT 97701 33 100.0 33 ................................. TTTAACGTCATTTTCAAGATATATTGCATTGCG 97767 33 100.0 36 ................................. GATTAGAGGGCGGATGCGATGGTGAATTGGAATAGT 97836 33 100.0 34 ................................. ATCGGTTGCCTTTGCCGGGCTGAAAATATCAAAG 97903 33 100.0 34 ................................. AGCGTGCCCGGCCCTAAGTGATATCGGGCTGGGT 97970 33 100.0 34 ................................. TTAGTGCTTAGCGGCGTAGGCGCGCCAGAAACTG 98037 33 100.0 35 ................................. CAATTTTTTAAAGCGTTATCAATAATTTTCATGGC 98105 33 100.0 33 ................................. GCAAAAAGCCAGGAAGCCATCTGGCTGATTGCA 98171 33 97.0 34 ...................A............. AGCACGTTTCCGGTCGCTGATTGCGGCTTTAACG 98238 33 100.0 34 ................................. ACAGACTGACCACAAAGTGTCTCCCGTGTAGACA 98305 33 100.0 34 ................................. TTTTTGCGCCTGGCCTTACGCTCCTGAGTGCCAC 98372 33 100.0 34 ................................. AAAGCGATGGAGGACTGAACATGAACAACACACA 98439 33 100.0 35 ................................. TTGTCTATGCTCCGCCAACCTCCGTGGTATAGACT 98507 33 97.0 34 ................................G CCGGTCAGCAAGTGCCGGACGGATAATCTCAGAC 98574 33 97.0 34 ................................G AAGAAACTCTATGATATGATATAGACAACAAAAG 98641 33 97.0 35 ..............A.................. CTGCTCAGGGATAACGGTCGTCTCCATTGGCTCGC 98709 33 100.0 34 ................................. CGCCCCTGCTCCGCATAATCCCGTCAGTCCAAAA 98776 33 93.9 0 .........T...C................... | ========== ====== ====== ====== ================================= ==================================== ================== 41 33 99.4 34 GTCGCCCCACGCATGTGGGGCGTGGATTGAAGT # Left flank : ATGCTTATCCACCCTTTTTTTGGAAATAAAAAGGAGCGTGTGTTGTGTATGTTTTAATTACCTACGATATCTCTACAGAGACAGAAGCGGGGAAACGGCGCTTGAGGCGGGTGGCAAAAGCTTGTGTCAATAAAGGCCAAAGAGTGCAGAATTCAGTCTTTGAATGCAAATTGGATGAAGCGGAGCTTGTGCTTTTAAAAAATGAACTACGAAGTATCCTGGATGCTGAGAAGGATAGCATTCGTTTCTATAGACTTAGTAAGAATTATAAAAGTAAAATAGAAACGATGGGTGTCAACAATGGGTATGATATAGACGGTGCAATCATCATTTAATGTGCACCAGTAAAATGATGCGAATCTCCGGTAATTTGAATTCTACTAACGGTTTCGCACTTTAGATTTCTTATCATATAAAATATTGCTTATGGAAATAATCGATTTTATAAGGTAAAATGATAAGAAGTGCTGGATATTGTGAAAATTACACAATATGTAGCT # Right flank : TAATGTGAACGGTTGATATTATCTTGAAAGCGGGACGGTGTTTTTGATAACGAAGGTTGAAAAAGATACAAATTCAAGCAAGATATACATTGACCTTGAAGTTGCTGATAGCCAAAAATAAGGGAGGACGTCTATGAAGAAAGAGAATCTCAGCCGTTATGATAGCGAAGTATGGAGCGACAACTCCAAAAATTGCGAGCAATGCAAAGACTGTATTTTTACGACGATAGAGGAATACCAAAAATGTACTTGCGAGATATACACTGATATGTATGATGACCCAAAACCCAATGACGTTATATTCAAAGGAATTCCGTGCAAGTATTATCAGCGTTGCGAGTATTCCCCGCGCACGCGGGGATGAACCCGCCACCAGCGTCGAATTTCAGGCGGCGTATGGGCATTCCACGCGCATGCGGGGATGAACCTAAAGAGGTGATCATCATGGGGTCTAATTCAAAAATTACGGCTTTACTTGGTTTGTTGATGGCACTTCCCAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCACGCATGTGGGGCGTGGATTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //