Array 1 29084-29662 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUFQ01000007.1 Lactobacillus pasteurii strain DSM 23907 127, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 29084 29 100.0 32 ............................. CGGTGATTACATGGGTCAAGGGCTAGCGCTAG 29145 29 100.0 32 ............................. TAAAACTAGGATAGATGGAGGATTTAGCTAGA 29206 29 96.6 32 ............................C TAACTGCTTAGCCACATCCTTAAGTTGTTGGG 29267 29 100.0 32 ............................. TAAACATATAAATAACCTCCATTAATCTTTGT 29328 29 96.6 32 ............................C AATGCCAAGTATGCACGTTTTGTCGAGTATGG 29389 29 100.0 32 ............................. AAAATAGCGTCAAAATGATCTGTTCCATAGAA 29450 29 100.0 32 ............................. TAAGGCGGTAAACACAATACCTTTAGTACCAG 29511 29 96.6 32 ............................C TTATTATGATGTATCTGACGCCATCGAAGCAT 29572 29 96.6 32 ............................A ATCAAAGCCAAGATTGTAGAAAGCATCATAGA 29633 29 86.2 0 ......................A.GAG.. | A [29656] ========== ====== ====== ====== ============================= ================================ ================== 10 29 97.3 32 GTGGTCCCCACGTAAGTGGGGGTGATCCT # Left flank : GATACAGATGAGATAACCGCTATTGGCGCCATAAAAAGGGATTCGGATGGAAGCTTAGATGAATTTTATCGCTTGATAAAAATTCAAAAAGAAGTGTCAAAAGAAGCCCAGGAGTTGACAGGTTTAAATCGAGAAATATTAGATGCAGATGGCACCGAGTTTGAGGATATAGTTGATGAATTCCTGGAATTCATCGATGGATGTGTGATTGTTGGATTTAATGTAAATTTCGATATAGGGTTTCTTAATCGATATTTGATTTTATATAATAGAGATGTAGTTAATCAAAAAGTTATTGATCTTCAAGCGATAGCTAAAAAAGATAGCATGTTTTTAGACGATTATCGACTTCAGACAGTTCTTGATAATTACGATATTGAAAATTTGAAGCCACATAATGCTTTAGAAGATGCACGTGCGACTTATGAGTTGGCAAAGAAACTAATGGAAAAAAGGGTTTTGAAATTTTAAGAAGCTTGATAGACTGGGATTTTTTTAGT # Right flank : TTCGATAGTAATATCTAAGCTCCTTTTTTATCATTAGAGGTAATAGGAAGAAACGTTGTTACCATATAGTAAGAATAAATAAGTGGCACGAGGCTACGGTGAAAAGTTTGATACGAATAAGGTAGAAATATGCATGATTGTATTGAAGCATTTGTAAACAAATCTGAAGTTCTGAGAATATTAAAGGTACTGTTATTCGATTTATTTGCATGTTAATTCGCAAAATTCAGTGCAGCAAAATAAAAAAATACTACTAAAATTATCAAATTTGATTCGAATTTGGATTATTTTTTGTCGAATTTAGCTAATTTTTTCAAAAAAATCGAATTACAAAACCTTTGATCTATAAGGCTTTGTTGAACATTTGAAATAAAATCAAAAATAAATTTCAAAAAAAGCTTGCAAAGGGTAAAAATATGCTGTAATATCTTTATTGTTCTGTTACGGAACAGCTAATTCAGAGCTAACAGTTAAGAAAATAAATTGAAAAAAGTTCTTGA # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCACGTAAGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //