Array 1 4570437-4573299 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP064002.1 Xanthomonas translucens pv. translucens strain XtKm33 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 4570437 31 100.0 34 ............................... ATGTAGTGGGCGATGACCTTGGCGGACGTGTTGA 4570502 31 100.0 36 ............................... TTTTCCAACCCGAGCGGATCTGTAGGCCATATGCGC 4570569 31 100.0 34 ............................... AAGTACACCGGTGGCGTGGCAGGGGATTTCCGCC 4570634 31 100.0 35 ............................... TTGCGCTTTGCAGGCGGCACTTCTGCGCTGTGTCT 4570700 31 100.0 36 ............................... ATGCTGAAGTCCGGCGTGCCGTCCACACTGTGGCGC 4570767 31 100.0 36 ............................... TCCACAATCTGCCGCGCCGTCTTGATGTAGCAGCGC 4570834 31 100.0 35 ............................... ATGCAGCCGGCCCAGTGGCACGGGGTAAACCCCTC 4570900 31 100.0 34 ............................... TTGACCGAAATCGCCGGCCAGAAACGCGGCTTGC 4570965 31 100.0 35 ............................... ACGCGCAACGATGGCGTGCGCGTTGGCTGCACATA 4571031 31 100.0 34 ............................... ACTTGAATGGCAAGAAAAATACGATCCGCACAGA 4571096 31 100.0 34 ............................... ACTGGGGACCTGACGTTGTGGATGGCGTAGCCGG 4571161 31 100.0 34 ............................... TGGTGGAGTTATACCCCAAAGTTCCGGAGTTTAT 4571226 31 100.0 37 ............................... CACGATGATTTGACGATCGGGGTACAGCGCGCGGACG 4571294 31 100.0 34 ............................... TCGATCGCACTGGTGGCGCTGGCGATGTTCGCCT 4571359 31 100.0 35 ............................... ATAAAAGGGTCTGACTCGACAAGCGCCGTATAATC 4571425 31 100.0 35 ............................... ATAAAAGGGTCTGACTCGACAAGCGCCGTATAATC 4571491 31 100.0 35 ............................... ACGCACAGTCCAGCCGCCAACATCCGACGGCACAA 4571557 31 100.0 33 ............................... GCGCAAACGGCAAGCCGGTGACGTTGTGGAGCG 4571621 31 100.0 33 ............................... TGCGGCCCTGCATGCGCTGAAGCACACCACCGT 4571685 31 100.0 35 ............................... GCGGATGAGGATTCTGCCGCACCAGAGGATTCCGC 4571751 31 100.0 34 ............................... TGCAGCGCAACATAGTCGGCCCGCTGCTGGATGA 4571816 31 100.0 38 ............................... CCTGGCTACGAGGTTTCTGACACAGGCGGAGTGCGCAG 4571885 31 100.0 34 ............................... CGGCGTCGTCAGTGTCGTGCTCCCATCTCGCATC 4571950 31 100.0 35 ............................... AACTCATGCTCAAGTAAACGGTAAAATTGCGCGTC 4572016 31 100.0 34 ............................... ATCTAGCCAGCACGCCCACCTATCCATGGCCTCC 4572081 31 100.0 37 ............................... AATACTGCGCTCATCGACGACTCCCGGCGGCAAGTGA 4572149 31 100.0 35 ............................... CTGATCGACGTGGATACCGCGGCCGGCGTCTACCG 4572215 31 100.0 33 ............................... ACAACGCAATCCCGTTCACCCTGACGCTGCAAG 4572279 31 100.0 36 ............................... CATGAAGATGCTGCCAGAGACGGGGTGATTGGCTCG 4572346 31 100.0 36 ............................... TGGCAGTCGCGCCACAACCTGCGGCACGCGCCGCAG 4572413 31 100.0 36 ............................... GCGCAAATCGCTGCAGTACGTCGGGCCCTCGCGCCA 4572480 31 100.0 35 ............................... TGGTCGCGGCGTGGGGGGTCACTGGTGTCGTCGCG 4572546 31 100.0 36 ............................... TGGCTGGGGATGCGGTAATGCGCGGCCTGCGTTGCG 4572613 31 100.0 34 ............................... TCCAAGTCGGGATGGTCCGCGGCGCCGGCGCGGC 4572678 31 100.0 34 ............................... AATGGCCGCCAAGCCGAAGTAGGTACCATCTGTC 4572743 31 100.0 35 ............................... CAGTCCGCCATTTCGGCCACAAGCTGCGGTGCGGC 4572809 31 100.0 33 ............................... AGCGCCGGGAAAGTGGTTTTGACGACTGGGGAT 4572873 31 100.0 36 ............................... ACGGAGGCGCTGCTAGCAAGCATGCGCATGCCGCTG 4572940 31 100.0 35 ............................... AGAAATATGTCGGAAGTGTCCATTGACGCGGTTGC 4573006 31 100.0 34 ............................... TCAGCCTGCGTTGCTTCCCGCAAGTTAGAGACCC 4573071 31 100.0 35 ............................... TTTGGCGTCAGGTTGAGCACGAACTTGTCTGGGTC 4573137 31 100.0 34 ............................... TGGTGCGACTCTATCAGCTGCCCCACTCATCAGG 4573202 31 100.0 35 ............................... ACCCATGCCATGTCGTCCCGGCGCCACTCGACATC 4573268 31 87.1 0 ......CG.......C.........G..... | C [4573293] ========== ====== ====== ====== =============================== ====================================== ================== 44 31 99.7 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : ATGAAAAGGCCGCCGCGCCATGATGGTTCTGATCAGCTACGATGTCAGCACGAGTTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTCTCGGTCTTCGAAATCGAGGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCAGGCGTCGACAGCCTGCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTGGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCGGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTACAAGAAAAACACTAACCTCTTCCGCTCACTACAGGTCCGCGGCGGCCCAATTCGATTGCGTCTCCGAAGGGTTCCGCAAAAGTGCGGACTTTTTTCCAACACCCATCAGCACTTATGCTCAGGGCG # Right flank : CTGGCCTGGCGACGATATGTCGTTCTATCGCCTTTGCCCACAAAAAATGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTGCTTAGCGGGACGCGATGCGCATCACTTGACTTCGAATTCCTGCACGGTCCCGGCCGGCTGACCGTTCACGGTGACCTCGGCCTTGTACTTGCCCGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGCTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACATTGGTGGTGGTGGAGGAACCCTCGGTTTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAGCGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //