Array 1 926783-925595 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011492.1 Streptomyces sp. CNQ-509 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 926782 30 100.0 31 .............................. CAGTGAACGCCGGTACCGGCGGCCCTTGATC 926721 30 100.0 31 .............................. CGGGGAGCTGGCCCTTGCTGGCCAGGGTGCG 926660 30 100.0 31 .............................. TCCCCCATGTCTTCGCGCCATCGGTCTTCAC 926599 30 100.0 31 .............................. CCGGCGCGACCTCCCACCAGCGCGGCCCGTA 926538 30 100.0 31 .............................. ACCTTCGTGGTCATCGACTTCGAGGCGACGA 926477 30 96.7 31 .............................T CGGGGAGGCGTGCGGGGTCAGCCAGTCGGCC 926416 30 96.7 31 .............................C GCAGCGACCATCAGGCCGATACCAGTTGAAT 926355 30 100.0 31 .............................. AATCTCACTGCCGGTACAAATCGCCACAGTC 926294 30 96.7 31 .............................A TCACACCCTGCTTGGTCTCCTTGTCGAAGCC 926233 30 96.7 31 .............................T CGGCCCAGTCCTGGCCAAGCGCCACCGCGTA 926172 30 100.0 31 .............................. CCCCAGGGTCAGCCTCGCGCCAGCGCGTGAT 926111 30 96.7 31 .............................C CAGCGCCGAACGCACCCACAACGGCGGCAGC 926050 30 93.3 31 ............................TT CATGACGGCCGGGCCGCTGCTGTCACAGGTG 925989 30 96.7 31 .............................T GATGCTGCTCAAGCGCGTTCACGAAGCCCTG 925928 30 100.0 31 .............................. TCCCCTTGTCCACGGCTGCTTTGACCAGGGC 925867 30 96.7 31 .............................T AGTGACACGTGCGTGCCCCCGCTCCAGCCGT 925806 30 96.7 31 .............................C TGCTGGAGCCCGTGGCCCACGGCTCCGGCCG 925745 30 96.7 31 .............................T CGTCGTAGAAGGTGGCGCTGGAGGCCAGACC 925684 30 93.3 30 .....................G......T. GCAAGCACCTGGGCCGCCTGCTCCCGGGCC 925624 30 86.7 0 ............C...T...A..A...... | ========== ====== ====== ====== ============================== =============================== ================== 20 30 97.2 31 CTGCTCCCCGCGTACGCGGGGATGGACCCG # Left flank : ACAGACCGCCGTACCTGACGCGGCAACCAGTCATCCCAGAGACGCCCTGCCACGGCACCGCTGTCCGCCATGTGCCGCCAAAGTGGCAGCCACGCACCGCTCCTGCCGCCCTCGTGCTGGTCGGACTTCGCCCACACCGCTCGGGCGGGCGAGGACAATCGCTCACCGATACGTGCCGGATCCGACGGCCTGTCGTTCATGCCGTGCATTAGACCCGGTGACGAGGTGACGGATAACATCGTTGAGTGATTCTGTCTGATAATTCATGCTAGTGATCGACGTCTTATGGTTTTGCTCCTCGAAGCTGTTGCTTCCCTCCCCGCGCCCGACGGCCACTCACTCGTTCTGCTTGCCCGGGCGGGAGCCCTTGATGGACGTACGCTGAGCTGTACCTGAGGCGATGCGTGCAGTCCCGGCTAGACCGAATGGTGGAAATGTCCGAATCTTCGTTGGTTGCTCAAACCGACCTCATCCCGCGATAAACACCCAGGTCAGTGACT # Right flank : TCTGAGGGCTGGCGATCCGATCCGAGGGCAGCGGTCCGTGGGACGACCGCTGTCTCCGGAATCTCCGCAGGTAGTCCCGTCGTACGAACCTACTAATACGTGTAGAACCCGGCGCCCGACTTCCGGCCCAGCCTCCCGGCCTCGACCATCCGCGCCAGCAGCGGCGGCGTCGCGTACGACGGCTCCTTGTACTCGGCGTACATCGAGTCGGCCACCGAGGCGACGATGTCGAGGCCGATGAGGTCCGAGAGCTTCAGCGGGCCCATCGGGTGGGCGCAGCCCAGCTCCATCCCGTTGTCGATGTCCTCGCGCGTGGCGATGCCGGACTCGAACATCCGGACCGCGGAGAGCAGATACGGGATCAGGAGCGCGTTGACGACGAACCCGGAGCGGTCCTGGGCCCGGATGGCGTGCTTGCCGAGCACGTCGCGGGCCAGCGCCTCGGTGCGCTTGAGCGTGTCGTCGCTGGTCGTCAGCGCCGGGATCAGCTCGATGAGGCG # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.60, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGTACGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGTGCGCGGGGATGGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 948123-947665 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011492.1 Streptomyces sp. CNQ-509 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 948122 30 96.7 31 .............................C CGCACTTTGTCCGTTTTTAAGACGGCTGCGT 948061 30 100.0 31 .............................. ACCGGTCAGTGGGCCGCGTCGCCGGCCTCCG 948000 30 100.0 31 .............................. TCCCGGGCGCCGTCGACGGCCGCACGGCGTG 947939 30 100.0 31 .............................. CCCGGCTGCCCTCGTCCCCGCCGATGACGAG 947878 30 100.0 31 .............................. GGTCCGGGTCCGGGTCCGGCGTCTCGTGTTC 947817 30 96.7 31 .............................A ACTCGTCGGTAACCTGCACGGCGAGGCTTGC 947756 30 100.0 31 .............................. CCTACGACGCGACGAACGAGGTCAACGCCGA 947695 30 93.3 0 .........................C...C | G [947668] ========== ====== ====== ====== ============================== =============================== ================== 8 30 98.3 31 CTGCTCCCCGCGCACGCGGGGATGGACCCG # Left flank : CCGGCGGCGAAGGTCGCCGCCGCGCTGCGCGCGGGGGCGGGGGAGCTACTGGAGTCGGTGCGGCTGTTCGACGTCTTCACCGGCGAGCAGGTGGGCGAGGGCCGCAAGTCGCTCGCCTATGCGCTGCGGTTCCGCGCCGCCGACCGCACGCTGACCGCCGAGGAGGCGGGCGAGGCCCGCGCCGCGGCGGTGGCCCGGGCCGCCGAGGAGACGGGCGCGGTACTGCGCGGGGCGTGACCCGGCCCTCGCACGACGGTACGGGCCCCGTACCGTCGTGCGGCGCCGGTGTCCGGCCGGGTGGCCACCGCCCTGTCTGCTTGAGTTCGGTGGGTGGCCCTGCCCGCTCGGTTGAAGCTGAACTCGTAGCATGGCGTGAAGAGTTGAACCTCGCACACCAGGATGCACACAGGCTTCTCGCTCGGCAGATGGTGGAAATGTCCGAATCTTCATTTGTTGCTCAGGACGGCTTTCCCTCTAGATAAACCCCCAGGTCAGCGAGC # Right flank : GCACGCCGTGTCGCGTTCCCTGAAGACTGACCCCAGGTTTCCCGTAGAGGGTCAGTTTTCAGGGACCGTTGACACTCCCGCACGGGCCGTCAATGCAACGTCTCCCCGGTGGTCTGGATCTTGAAATCCGCCCAAACCAACTTGCCCGGGCCGAAGCGGTCAGACACCCCCCAATCGTCCGCGAAGTCGGAGACGAGCATCAGGCCACGCCCGCGGTCGTCGGTATCCGCGGGCGTACACAGGTGCGGAGTGCCGCCGCCGGCGTCATGTACCTCGATACGTACGACGCACTCGTTGACGGTGATCCGTACAAGGAAACGGCGGCCCACGGGTGTGTGCTGGAGCGCGTTCGTCGCGAGTTCGGAGACGCACACGCGGATGTCGTCGGTGCGTTCGTCCGTGCCAACCACGGTGGCGGCGAAGTCGCGCGCCTTGCCGACCGACGCGGCGCTGCGGGCGAACATGCGCGCATGCGTGGCCCTGGTAGCTGCCCCGTGCTG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //