Array 1 2292635-2294523 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043051.1 [Ruminococcus] gnavus ATCC 29149 strain JCM6515 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2292635 32 100.0 38 ................................ ATCATTTGCAATCAAATCACAGACGGAGCAGGCGGCAA 2292705 32 100.0 34 ................................ GATGTGTGGTTGAATCACGTTCGAGAACTGAGGG 2292771 32 100.0 34 ................................ CCCGGTGCCTTATCCTGTGAATCTACTCCATCAC 2292837 32 100.0 34 ................................ AAATCTGGCGATCTCGGATTATATGAATATCGAG 2292903 32 100.0 33 ................................ AAACCTATCATTATCCGTATTTCCTTTCGATTC 2292968 32 100.0 34 ................................ TTGCAGATGTTTTGCTCGTATCGTCCAGAAACAT 2293034 32 100.0 34 ................................ TATAAATCCGCCCAATTCTCCCTCTGCTACATCA 2293100 32 100.0 35 ................................ TTGTTGAATCTTTCTTGTCATTTGTTTCCTTATCT 2293167 32 100.0 33 ................................ CTGTCGATTATGAGCCGGGGATTGTCCAAAGAC 2293232 32 100.0 35 ................................ AGTGAATAATCATCATTTAACACAGTCTGGAACTC 2293299 32 100.0 35 ................................ AGAACTTAATCAAAAAGAAAGGAGTGATTGATACG 2293366 32 100.0 35 ................................ CTCATCGGTCAGAATAGAGTCATTGAACTTGCAAG 2293433 32 100.0 35 ................................ AAGGTGATGCAGGGGCTTACGTGGGATGAAGTGGC 2293500 32 100.0 35 ................................ ATTCCACGGTACAGCTTGTTTTTGAGTTTCGGAAG 2293567 32 100.0 37 ................................ CCCATCCCGTGTGTTTAGGGATCAGGTCGGGAAAAAC 2293636 32 100.0 33 ................................ GTCTTAGGTTGTTTAAGGTGTGTAACCATCCAC 2293701 32 100.0 33 ................................ CTCGGTATACTGCTGCCGATAGTCTCCATACAG 2293766 32 100.0 33 ................................ AGCATAACCTTCCAACTTTTCCTCTACGCCTGT 2293831 32 100.0 34 ................................ CCCCAACTGTAGCATGGCATATCCTTTCCAAAGT 2293897 32 100.0 34 ................................ GAAAGTACGGCACAAGAAATCCACTTGAGATTGT 2293963 32 100.0 34 ................................ CCAGAGTTTTTGATCTCCTGCGGATATTCTGGGC 2294029 32 100.0 35 ................................ TCAACATTCCATAGCTAAAATCAATACCATAGGCC 2294096 32 100.0 33 ................................ ATGGTTGTGAGTGATATCGTAGCTTACCGGAAC 2294161 32 100.0 33 ................................ AAGTTCCGGTTGCCAGAAGGGATGATCCTGACA 2294226 32 100.0 36 ................................ ATGTCACGTTCGATTGTGTATTCGAACGCATCCAAG 2294294 32 100.0 34 ................................ CAGTCCATAAGCGCAAGCTCCGGATACTCTTCCA 2294360 32 100.0 35 ................................ CAAACATACCAGTTGTACATAAATTACTATCACAA 2294427 32 100.0 33 ................................ CAGGCGGGACTTTCGGATAATTGGATCCATTAA 2294492 31 90.6 0 ........................-.G..T.. | T [2294520] ========== ====== ====== ====== ================================ ====================================== ================== 29 32 99.7 34 GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT # Left flank : ATCCGGTATTTCTCTGGAAATGAGGCGAAAATGGGATGTTAGTGTTGATTACATATGATGTGAACACAGAAACAGCGGCTGGAAAGAGGAGATTGCGCCAAGTGGCAAAACAGTGTGTAAATTATGGGAGAAGAGTGCAAAATTCTGTATTCGAATGTATCTTAGATAATGCACAGTGTGTTATGCTTAAGGCAAAACTGACAGATATCATCGATGAAGAAGTTGATAGTTTGAGATTTTATTACTTGGGAAATCAATATAAAACAAAAGTCGAACATGTTGGTGTAGACAGAGGAATTTCGGCGGATGGAATTCTTATTATGTAACTGGGGTGCGGATGATAAGCAAACATAAAAATGCTGGGAGATTCGCACCAAAAAAATGCACAAAAATTAGTTGAAGAGGTGAAAGTTAGAGAAATATGATGAGGAAAAGAGAATGATATTGGTAGAATTGAGTAATATTAAAGAATATAAAGCCTAAAATTAGGCAAAATTGCT # Right flank : TGTGGTGGACGGGCTGCCGGAAGATGCCGATGATTTCCGGTATCCGGGAGATGCGATCGAACCGGAAATACAATCGGAGTTGGAACGTGCATTAAGCGGGGAAACGGTATTGCCGGAGAAGATTCTGGATACAGACTGGGGAAATATTTTTATTGCTTATTATCCGTTGTATAATGAATCAGGAGAAGTCATCGGTGCACTTGGAATAGAAGTTGCGGCAGATATAGAAGCCGAGGCGGTACATGACAAATCCATTATACAGAGACATGGCAAATACTGATTTTATGACAGAACTAAAGAACAGAAATTCTTATGAGACAGACCGGCAGAACCTGGATGCAAAGAAGAAATGGAATGGCCTGACAGTGGCAGTGATCGATGTGAACAATCTGAAGCTGGTAAATGATCGGCTGGGGCATGCTGTGGGTGATGATTGTATTGTGAATGCAGCACGGGTCCTGCAGAGTGTTGAATCTCAAAAAGTTACGGCGTATCGATAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //