Array 1 26676-25400 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIO010000028.1 Bacillus aquiflavi strain s-12 Scaffolds_28_56913, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 26675 37 100.0 36 ..................................... ATTATCCGAGAGGAAGACGGGGCAAAGTCGTTTAAT 26602 37 100.0 36 ..................................... ATTGAAGAAGTCAAAACACCGGAACAGCTTGAATTA 26529 37 100.0 38 ..................................... AATGACCGTATTAAAGAAAACTTTAATACCCCTATACC 26454 37 100.0 34 ..................................... CACGTTCAAGTGTTGGTGTAACGGCACTTGATAG 26383 37 100.0 37 ..................................... GTCCTGCCTTTGCGATTTCCCAAGCTCTTTTCATAAC 26309 37 100.0 36 ..................................... AGCTTTACATATTTTTTATACTCATTTGACTTTTTT 26236 37 100.0 39 ..................................... AATGTCACCATTAAAGGCGAAATCATTGGCTTTACCATC 26160 37 100.0 35 ..................................... AGTTCGATCGCTTTATGCTTCATTTGCGGCCACCT 26088 37 100.0 35 ..................................... TTTTTCTCTACATCACGTCCGATTTTATATCCTCT 26016 37 100.0 36 ..................................... AGAAAGTGGAGGTCGATATGAGAACGGTTTGAGTGG 25943 37 100.0 36 ..................................... CTAGAGCAATTCTATAATCTCGTTCCGATTCAGCTT 25870 37 100.0 34 ..................................... TTGATGAGGAAATTCCCTCGGCTACTAGTGCTAC 25799 37 97.3 35 T.................................... GAGATAGTGGACTATCTCAACCGTGCAGCTAATAA 25727 37 100.0 35 ..................................... TTCTATCCTTCAATTTCCGTACCGGTACGCCTTCT 25655 37 100.0 37 ..................................... AAATTATAAGCGTATGGAAGTCTATAATTTATTGTCG 25581 37 100.0 36 ..................................... GGTTGGCTGTGGCGATATCGTAGGAGTTGAAATGAA 25508 37 100.0 35 ..................................... AACTTATGTTGTGTCCGTAGTTGGGCAATTCTATC 25436 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 18 37 99.8 36 GAATTAATTGAATTAACCTCAAGTAGAGGATTGAAAC # Left flank : TTTTAGGACCAAGTGGGGTAGGCAAGACCCACTTGGCGACCGCGATAGGGATTGCGGCAGCAAAGAAACGGACGAGCACCTATTTCATTAAGTGCCACGATTTAATTCAAAATTTAAGACGAGCACGACTAGAGAATCGCTTGGAAGCCCGTTTAAAGCATTTTACAAAATATAAACTACTAATTATTGACGAAATCGGTTATTTACCGATTGAGCAAGAAGATGCAAAACTGTTTTTCCAGCTGATTGATATGCGATATGAGAAGCGAAGTACCATCTTAACGACCAATGTGAATTTTAAAGCATGGGATGAAGTTTTTCAGGAACCCAAACTAGCAAATGCCATTCTAGATCGTATTTTACACCATGCGACAGTCGTCACAATGATCGGAGACTCGTATCGTTTAAAGGATCATTTTACAATAGAAAGCGAGTAATTTTGTACATTCTTAAACAAGCGAAATTGTACATATTTATGTTGACATTTATACAGGAAGATA # Right flank : GTGATGCCTTATGTTATTTTTCATTAATATTTCTTTTTCTCTCTTAATGGCTTTAATATTAGTAAAAGAAGAATGACGATAACACCTATTGCTCCTGTTAAAAATTCATTGTCCCAAACTAAATTAGAAAAGGTTAACAATAACATTCCTATGATCCCTACAAGTGAAAATTTATCTAACTTACAGAAGGTAATAAGTAAAAGTCCGATAAAACAAGCCACTATTAAACTAATCATTTTTATTAACACCCACTTTTATCACTGGAGAATTCCCGTATCATGTGCTTGAATTAATCATAACATCTCAAGGTTCTTTTTTCATAGTTTTTCGTAATCTGTGTTTACTTTATCATGCCATATCAACTTTTTATCTAGTAAAAAACTTGATATCATAATTAATGTTTTACATAATAAATAGGAATAGTTACGTTTTAATGAAGTAGTCTTTCTCGTTTCCGTTTGTTTTACTGGGGAAAATACTCAATGTATTTTTTTATAAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATTGAATTAACCTCAAGTAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 30463-28904 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIO010000028.1 Bacillus aquiflavi strain s-12 Scaffolds_28_56913, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 30462 37 100.0 38 ..................................... TAATAATACGGTTGAAATTGAAAGTAATTTGATAAATG 30387 37 100.0 35 ..................................... TAACTCACCCCCTTTTGTTCATCACCTTCATTTAA 30315 37 100.0 35 ..................................... TAAACGTTCGCAGTCTTAATGGGAGTTGTAAATTC 30243 37 100.0 35 ..................................... CCCTTCATGTAAACCGTACTTAATAAAACATTTAC 30171 37 100.0 35 ..................................... TAAAGCACTTGCAATGTCCGTTAACTCCACTTGTC 30099 37 100.0 35 ..................................... CGCACAACCCAAACTTAGATTTAAAATAGGTTTCT 30027 37 100.0 35 ..................................... AGTGGATGAAGCATTAGAGTTAATCGGCTTCAATG 29955 37 100.0 36 ..................................... GAAACTTATTCATGTTCTTGTCATTTTTCCACTCTT 29882 37 100.0 36 ..................................... TTTACGGTATGCCCACGAAAAACCGAAACTTGTACC 29809 37 100.0 36 ..................................... TGGTTTGGTAACTTCAAATAATCCGCCAGCTTTAGA 29736 37 100.0 35 ..................................... TTGTCTGTCCACTTATTCCCGTCTCGTGTAACTAT 29664 37 100.0 35 ..................................... CAACTCGGTTCCTCCTTTGTAACGTATTTTATTGC 29592 37 100.0 35 ..................................... TCCGCACCTTTTAAACTAAAGGTTAAGGTTTCCCT 29520 37 100.0 36 ..................................... TTTTACCGTCTCTTTATTCTTTCCCCACCGAAAAGC 29447 37 100.0 36 ..................................... GAGTCTATCGTAAGAGATACGTCAACTTTTCCTGCG 29374 37 100.0 36 ..................................... ATTATTTCGCCGTTTTCATCGACTCCGATCATAACT 29301 37 100.0 36 ..................................... AAAATTTCCGATACAGTTATCCACGGTTCAGATATT 29228 37 100.0 34 ..................................... AATATCCCTTGATTTAAACACTCCTGACAAAGAT 29157 37 100.0 34 ..................................... ATTAATAATTTTATCTTTTATTTTTAACTTTTAA 29086 37 100.0 37 ..................................... AGTCTTATAACCAGCCATCGCAAGGAACTGCATCAAT 29012 37 100.0 35 ..................................... ATTCTGCATCTGCTCCAACGTCACAAAAGGTCTTG 28940 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 22 37 100.0 36 GAATTAATTGAATTAACCTCAAGTAGAGGATTGAAAC # Left flank : TCAGGAAAATATTATATTTTACCTGAACCAAAAAGAATATTTTCAAGCGCCTTAAAAACCTATAATCAAAGTGAGGAAACTACTGAACAATTAATATGGGATGATTTATTGCCAATAATAGATAAATTAGTTATGATTGATATTAATATTAAATCTAAACCCATTTCCTATGGTAGATTCACAGTAAATGGTTTTGTAGGGAAAATAATTTGGAACATTAATAATTTAACGAGAGAAGAAAAAAGGTTCCTTTCCATGCTATTAACATGTATGCAAGTAATGGGAGTGGGAACAAAAACGACATGGGGTATGGGGAAAATTTATGCGACCACCACATGCGTCGGAAAATCCACTGGAGGTGCTCGGAAGCGTTAAAGCATTGATAAATAAGGAATATGCTGCTGTCAACTCGTTTAACTCATTAGGGGAGCGATAAAAACATCAAGGTCATCGGAAAACGACTTTTCTCCCCTAATCTCCCAAGCATTCAGATGGCTGCG # Right flank : CTTGTCTTTTAAGCCTGTATATTCCAGGAAGTAGAAATGCTATCTTAAATATGTACAAAAACGCTTGGATAAATATGTACATTCTTGCTTCCATTCTACATACTAGTCTTGAGGTGACTAGTTATGTATATATCGCTAAATGTTGATGTTAATATTGAGATTAATAGTCTTTCAGACTTACCAAAATTTAAACAAATAATGGAGTATATGAAAATGAAAATTAATAAGAGCAAGTTGGCAAAGGAGTTAGGGGTAGACCGCCGAACGATTGATAAATATTTAAATGGTTTTGTACCTAAGAAAACGAGACAGAGAACGTCAAAAATTGATGAATATTACGAAGTAATTGCTGCTTTGTTATCAGAAGACTCCAAACAGGTGTTTTATTATCGACGAGTGCTATGGCAGTATTTAAAGGACAATCATGGCCTTGATTGTGGGGCTTCCACTTTTCGAGCCTATATTGCACGTACACCAGAATTTAATGCTTATTTTGAAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATTGAATTAACCTCAAGTAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 27664-20592 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIO010000018.1 Bacillus aquiflavi strain s-12 Scaffolds_18_67030, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 27663 32 100.0 36 ................................ TTCGTGGGCTTACGTGGGATACGCAGGAAGCGATGC 27595 32 100.0 35 ................................ GAAAGCAAGCGAAAATTGTAAACTTTGGTATTGTT 27528 32 100.0 35 ................................ AAATTTTATCAAGCGGAATAGGATGGTGAAGGAAT 27461 32 100.0 34 ................................ CGATACGGCGATTGGTGTGGGGAATTGACATTAC 27395 32 100.0 35 ................................ GGAAGCAGTTACGGAAATACAAGACGAGAAACCTT 27328 32 100.0 35 ................................ AGATAATAATCAGTGCTATCATCGGGGGGAATACT 27261 32 100.0 35 ................................ TGGCAACTAGATCGCCGAACATTTGATTTAGTCGC 27194 32 100.0 34 ................................ GGACGTAAGCGCTAACGCTCTTTTACGCATAATT 27128 32 100.0 33 ................................ TCGGCGAATGCGGCCAGCAATGTAAGGATGACC 27063 32 100.0 34 ................................ TTATTATTTTACCGCTAGATGACAACCCGCAGAT 26997 32 100.0 34 ................................ ATGTCGATGATGCGGCAGAGGCGGAGCAACTAAT 26931 32 100.0 34 ................................ GGCAAACTCCCGCTGTGTAAGACGCTTGGAAACT 26865 32 100.0 33 ................................ TAGCTAATTGTCCTACGCTTTCGAAATGTCCTT 26800 32 100.0 35 ................................ CTCTCCGACCTTAACGCTAAAAAATGCCCGCTTTT 26733 32 100.0 36 ................................ CGACAATAAAAAGGGGCAAGGGGTCGCCTGAAACTC 26665 32 100.0 34 ................................ ACGCGGGCAACGAGCATATCATCGACAACCTGCT 26599 32 100.0 36 ................................ GAAATGTCCTTTACGGCAGGCAGCACAACAAAAACG 26531 32 100.0 33 ................................ AAGACGACAAAATGGCGACTTGCTAATCGCGGG 26466 32 100.0 35 ................................ GATAGCATAACGCGTCTGAGCCGCAATATGAGCGA 26399 32 100.0 35 ................................ CCAAGCGTCCGCCGCACTGCTTGCAGCCTCGTTGT 26332 32 100.0 34 ................................ GCGGAAAAGGAACGAACCGACATCAAACAGCGCC 26266 32 100.0 34 ................................ TTCGCTTTGTTTCTTGCCAATGCCATCGGCAATT 26200 32 100.0 34 ................................ AACGGGAATACGCGGCTGATTTACGAGCTACTAT 26134 32 100.0 34 ................................ CTCTCTTGTGTAGGTCTGTCCCTCGCTAATTACC 26068 32 100.0 35 ................................ GTAAAAGTATATGAGCGATTTTCAAAAACGACACC 26001 32 100.0 35 ................................ GGATCATTGCTTTATTAATGAGGAATTGAGCGCAT 25934 32 100.0 35 ................................ AGAAAAGCAATTAAATTTTATTAAAAATCTATTAC 25867 32 100.0 36 ................................ TGCATTTTAAAACGTTGATATGACGCGGTTTACAGC 25799 32 100.0 33 ................................ TACTTCCCGTACCATCCAATTACTTCCTTCTTA 25734 32 100.0 34 ................................ ATCACATCGTCATTTACTTTAAGGTTGGCAGCGG 25668 32 100.0 34 ................................ GTGCATGATAAGCGGTATGTATTCGTGCGGATAT 25602 32 100.0 35 ................................ GACAGCATAACACGATTAAGCCGCAACATGAGCGA 25535 32 100.0 34 ................................ CGAACTTGAAAGGTTGGTTGTGTATATTGTCGGT 25469 32 100.0 34 ................................ ATACGCTCCTTTACCATCCTTTTAATCTGTGATC 25403 32 100.0 35 ................................ GTGTCCTCGACTATTTCATCTCCTACATAGATTGT 25336 32 100.0 33 ................................ TATTCGTCTGAATCTTTTTATGCTGTATTGCCC 25271 32 100.0 35 ................................ GTGATTTTTCCGTCCGTCATGTCAAGTACATTAAC 25204 32 100.0 35 ................................ CTAGCATCCTCCTTAAAAATAATTAAAACGGTAAA 25137 32 100.0 33 ................................ CAATGTGGATAACTAAAATATATAAATTTTGTC 25072 32 100.0 34 ................................ TCGGTATCCCACGGAAAATAACGATATTTTTAAT 25006 32 100.0 34 ................................ TGCTCTCCTAATATAGAATTTCGCCATATTCCGT 24940 32 100.0 35 ................................ CGCTTGTTAAATCTGGAAGAGGAATAGTGCTTGAT 24873 32 100.0 33 ................................ GTTTCTGACGTCCTGATACGCTTGGAAACCTCC 24808 32 100.0 34 ................................ GCCGAAGCTTTAGCGATGTTTAAAGATGTAGGCG 24742 32 100.0 34 ................................ CGTCAATTATGGCGCCTGTTTTTGGGTCAATCAC 24676 32 100.0 35 ................................ TTTTCGATATTTATTAAGGTTCTGAGTTCAGGACT 24609 32 100.0 35 ................................ ATCTTTTATCTCCTCTACTCCACCTAATATAAATT 24542 32 100.0 33 ................................ TTCTTTATTCGCTTCATCCATTCGCTTTTTAAA 24477 32 100.0 33 ................................ ATGAAAGACAAGCACAAAGAATGATAAAAGTTG 24412 32 100.0 34 ................................ ATCAATTTACAGTCGCTTGTCGCTTGTATACAAT 24346 32 100.0 35 ................................ AATATTTGGAAATGCTTGTAAAAAGAATATAACCA 24279 32 100.0 35 ................................ AGATTGTTTAAAGCGTCACGTGTTAGCTTGTTTTC 24212 32 100.0 34 ................................ AGACCACTGAATATAAAAATGGTAAAGCTTATAC 24146 32 100.0 34 ................................ CTCGAAAAGGTATTGGAGCGAAAAACGTTTTACT 24080 32 100.0 34 ................................ CTCTCCCTCCACACCCACCAATCAATATCTAAAC 24014 32 100.0 34 ................................ CGTTATCAACTTTAAAAACGATCTTGCAGGCTTT 23948 32 100.0 35 ................................ TTAATCACTAAATATCAATCCCCACACACACCAAT 23881 32 100.0 34 ................................ TCCGAATGTCATTTAATTTATCCTCCTTTGTTTT 23815 32 100.0 35 ................................ GATAACTTTAAATTAAAAATGCAAAGGTGGGCTTA 23748 32 100.0 34 ................................ CTATTTATGGAGATATTTCCGCAGGTGTTTTAAC 23682 32 100.0 34 ................................ GAACCGTTTGTTATTAGTTTTTATCAATATTTCG 23616 32 100.0 34 ................................ ACACGGTCGTACTCAATCACTTGCTCCGCTCCCT 23550 32 100.0 35 ................................ TAAGAGAGAAACGCTGTAACCCTTGATATGACAAC 23483 32 100.0 35 ................................ GTATTCTTTGACGATTTTATACCATGTGGACTTGG 23416 32 100.0 34 ................................ GTTCAAAATCCTTGTAATGATATTACTTTTTAAA 23350 32 100.0 34 ................................ CAGTCGGAAAATTAAGAGGAATATGGACATATGA 23284 32 100.0 36 ................................ TTAAATAGTTTTTGTCCTACTTCGTCTGCTATTTCT 23216 32 100.0 34 ................................ AATTATAATTGGCTTATCTGGTCTAATTTTCTTT 23150 32 100.0 35 ................................ TCGAAAACATCTAATAACTTGTACAAGTCGAACAC 23083 32 100.0 34 ................................ GCTAACGAAAGATGGTTATGGTGCTTTGATAAAC 23017 32 100.0 35 ................................ CTATTTTTGCGGTTTATAAAGGTGACGATCTAATT 22950 32 100.0 34 ................................ TCCACGAAGAGCCGATGATTGGCGAACTTGTGGA 22884 32 100.0 34 ................................ ATGATTTGCAAGCCCCCTTTATACTCGTTTTATT 22818 32 100.0 34 ................................ CTTTACGCAAGTTCTGAGCCGCGGCATCTGTTAT 22752 32 100.0 35 ................................ TGCTAACCTATCCCAGTCCGCTTTACGTGCTCCCT 22685 32 100.0 34 ................................ AACCCCCAAATCTCTCGACGTCGAGAGATTTGAG 22619 32 100.0 36 ................................ GCTTTATGCGGGCGCACTAAAAAAGGTCGGTAAACA 22551 32 100.0 34 ................................ ATCGATTTGAAGATACTTGGACTAATTATTTTGT 22485 32 100.0 36 ................................ AGCAAGTCGGTCAGCTTAAATGCTGTGGATTGAAAG 22417 31 96.9 34 -............................... AATCATAGTAATCACTATCATGTCCAACATCAAT 22352 32 100.0 35 ................................ TGTTTTAGGCGGATACAGTTTACCGCCTGTAGAAG 22285 32 100.0 33 ................................ CACCCGCCTTTGGTCGAATAGCGGCGATTTTTT 22220 32 100.0 35 ................................ TTTAATCAATTAAACATTGAATACTTATTCGAAGC 22153 32 100.0 34 ................................ TACAAAGCGATGACGCAGAAACTGCTGAAAGCGA 22087 32 100.0 34 ................................ TGAAATAATCACTTGAAAATAAATTGAATATGAG 22021 32 100.0 34 ................................ GGTTTCAAGTGGGCTACCACGCCGACATTGCGAG 21955 32 100.0 35 ................................ ATAGTATTAGTTTCCGTTATACTCGTTTTATTGGT 21888 32 100.0 36 ................................ AATGATTGAAATAAGTTCGTTAGCTAGGTAAAAAAA 21820 32 100.0 34 ................................ CTGCAGGTAACGTATCTAATGAAAAACTGACGGG 21754 32 100.0 35 ................................ TAGTTTTAGTCCTTTTATCAATGATGATACTCAAC 21687 32 100.0 34 ................................ ATCCTTATCACTCCTCTCCTGTTGCTATACGTCC 21621 32 100.0 35 ................................ AAACGTAGTGATTGACCCAAAAACAGGCGCCATAA 21554 32 100.0 33 ................................ AAAATCGCTATCTTGAATTGGGGGAAGATTTAG 21489 32 100.0 35 ................................ CTTATAGTCCTGCGTACATCTGTAACTAGTGTAGC 21422 32 100.0 35 ................................ TCTAACTGTCGCTGTAATCGTCGCCATGTTTCCGC 21355 32 100.0 35 ................................ CGTGAAACGTGCAAGTAAACATCAGCCGTCATATT 21288 32 100.0 33 ................................ AAGGTTTGCTCCTCTAAGGTCTGCTACCCTAAG 21223 32 100.0 36 ................................ TGGTTACGATGGAGATCTTTCTGACGATTGGAGAAA 21155 32 100.0 35 ................................ CTCGTAAACTGAGCCTCGCACGATGACCTCGCCTG 21088 32 100.0 35 ................................ GCTAGTTCCTCGTCGGTTTCTCCCGCGACGGTATT 21021 32 100.0 35 ................................ AATATGGCACAACAAACGAAAAAACAATTACAAAA 20954 32 100.0 35 ................................ CAAAAGAACTATATTTTGGTGATCCATTAGGAGGA 20887 32 100.0 34 ................................ AAATTTGATTGGTACTGTAGATATTAATAAAATT 20821 32 100.0 34 ................................ ATGAGGGAGAAGTTGAAAAGATTGACGAGCAAAC 20755 32 100.0 35 ................................ ATCTTGCTTTCCGTCTACTGTGGATGTCTGAGTTT 20688 32 100.0 33 ................................ ATATACCTCTTGAGTGGAGTCTGCAAGTTCAAG 20623 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 107 32 100.0 34 GTCGCACCCTTTATGGGTGTGTGGATTGAAAT # Left flank : AGATGAATACCCGCCATTTTTATGGAAGTAGGTGTAAATATTTGTTAGTATTAATTACGTATGATGTAAGTACAGTAAGTACTGCAGGAAAGAAAAGGTTACGAAAAGTTTCTAAAGTATGTCAAAATTATGGTCAACGAGTTCAAAATTCGGTTTTTGAATGTATAGTAGATGCAACCCAGTTTGCTACATTAAAAATTGAACTAACTAATATTATTGATGAGGAACAGGATAGTCTCAGATTTTATCAGTTAGGAAATAATTACAAAAACAAGGTTGAGCATATTGGAGTTAAAGAATCTATCGATTTAGAAGAACCTTTAATTTTTTAGTGCGAATGTATAGTGCACATAAAATTACTGATAGATTCGCACCATAATTTTAAACTATAATTTACATTTTTGTAATTTTAGATAATATCATTCTTTCTTAATGAAAGAAAATTAGTGTGTTTTTGATCAAAATATTACTATTTTTACTTTTTTTGATCAAAAATCGCT # Right flank : TTTGTCACCCTTCAAATGGGGCTAGTTTGATAGGATTTTTATACAAGTCTTATCCTCTTGAATAGCTCGAGTCGGCTAATTCTCCTTTTTTAAATGGAACAAATAAATTCAGTAGTTTTATGATTTTTCATACGTTTAATAATTTAGCGTAATTTATTTTTTTGACGGATTCTGGGACTGTCAATATTTTTGTGTAAATGAATTTTCAACCCTTTAAGGTAGTTCGTCACTTTCCGATACATCCAAATTTTGCGCTGGTGCGCCTGATTATTTTATAGGTTCATGTAGCTGCTCAAACATCTCTTCCAACTTACACGGGCCTGGTTAAAGCCGATATGACAACGCGTGACGAAACGTTGATTGTAATCTTCAAATTGCGTCACTAAGAAGCGTTCCAGCGATTCTTCGTTCGGGAACTGTTCCTTACGTTTCGTATATTTCTTGATTTGTTTATTAAAAGATTCAATCAGATTTGTCGAGTAGATGCTTCGCCAAATCGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTTATGGGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //