Array 1 717767-721204 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP019314.1 Microcystis viridis NIES-102 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 717767 37 100.0 37 ..................................... TTTAAATTACCGGCAAAATTTTGCCAGTCTTTCTCTC 717841 37 100.0 37 ..................................... TTCAAACATGATACTAATTTTTTGACTTTTTGCCCGA 717915 37 100.0 35 ..................................... AAAATTAGTGACTTTTTTTCGGTGGGTGAGGTTAC 717987 37 100.0 35 ..................................... TTTGCTGTTCAAAAGGGATATTCCGCATTTCGATC 718059 37 100.0 33 ..................................... AAATCGAGAAAAAAACTATCGAGAATACTTAAA 718129 37 100.0 35 ..................................... TAATCACTTTTATTGCTGACTTTGCTGTACATCTT 718201 37 100.0 36 ..................................... GATGCTTTATAGGGAGGAGAGAAAAATAAAAAAAGA 718274 37 100.0 35 ..................................... TCCTATGGATGGGCATCGGAGGGTATTAGCTTGGT 718346 37 100.0 34 ..................................... TCGATTAATCATCCTAAAGATATCGGCAGAACCG 718417 37 100.0 33 ..................................... CTCTACTACTCCATCTACCCAATAAAAAACCCG 718487 37 100.0 34 ..................................... AAGACTAGGAACATCAGCATAAGTTGAAAACAAA 718558 37 100.0 35 ..................................... TTGGCACTTAAGAAAGGAACCCAAGATTTAAGCGT 718630 37 100.0 34 ..................................... CCAAACACTAGCTTTTACAAAGCAACCAGCTCGT 718701 37 100.0 35 ..................................... AAGCATGGAAAAACTAAGCGAGTTAACATCAGAAT 718773 37 100.0 34 ..................................... AACCCTGATTCTAATGCAAGAGAATTGACTTCTA 718844 37 100.0 34 ..................................... CGGCATTCTCTATCGGCGCGTCTCCGATAGACTC 718915 37 100.0 33 ..................................... AAGAGAGCTATCTTATCCCTTACCAGACGGAAA 718985 37 100.0 35 ..................................... TTTTGGAACTTCGCTTAGATGCCTTATTGGGTAAG 719057 37 100.0 40 ..................................... TTAACAGAAGCAGAAGCTCAAAAAGTCTTTGAAGAAAAGA 719134 37 100.0 34 ..................................... CAATAGTGATGGAACACCTCGCAAACGAGTAAAA 719205 37 100.0 42 ..................................... TTCGGCTGCATACATATAGCACCAATCAGGCTTGCCACAGTG 719284 37 100.0 33 ..................................... ATGATTTACTGTGTAATAGTAATTGTGATGAGT 719354 37 100.0 39 ..................................... CCCTTTAGCCGATTTAATTCCTATGATTTTGGGATTCTC 719430 37 100.0 36 ..................................... TTCCTAAGTCAGCAAAGTTGTTGATCGTTTTTTCCG 719503 37 100.0 35 ..................................... ATTTTACCCTGTATTTCAGAAATTAGAAGAAAAAG 719575 37 100.0 37 ..................................... AGCCCAAATACTTCCCCGTCCCGGCGCTCAATCTTAG 719649 37 100.0 36 ..................................... TTCCCTATGTCTGACCGTTGGGCGGGGAGATTTAAT 719722 37 100.0 35 ..................................... TGAATCTGGTTTTGGTAGTGCCACTGGCTGATATT 719794 37 100.0 35 ..................................... ACTTACAGGCAAATCACTCGAAATCCTGTAATTGG 719866 37 100.0 35 ..................................... TTACGAAAGCAACAATAGCGACGACGAGGACGATG 719938 37 100.0 34 ..................................... TAAAATCAAATCGGGTAAAGGGAAAGGGAAATTA 720009 37 100.0 35 ..................................... TTGCCAAATTCTCCACCTCAGTCTCCCTTTCCCTT 720081 37 100.0 34 ..................................... GTTCAAACGACTGCGCTCGATTTTATCGAGTCTG 720152 37 100.0 37 ..................................... TTCGCATTTGGTCTGGGAGCAACTTTGCTCCTATCAA 720226 37 100.0 35 ..................................... GGCAAATATAAAAGATTCTGGTTTTTAGGATTAAA 720298 37 100.0 34 ..................................... TTGTCCCTATTCCGGGCGCGTCCCATTAAGCTGT 720369 37 100.0 37 ..................................... AACAGGTTGTAACCAATGGCTATAAGGTGTTAACAGA 720443 37 100.0 34 ..................................... ATCGAAGAGCTACACGCTGAAAAAGAGCGCGATA 720514 37 100.0 34 ..................................... GATTAATATTATAAAGTTCGATTGGGAGACGAAT 720585 37 100.0 38 ..................................... GATCATATTGACGAAATCCTTGACCTAAAAGACCGAAT 720660 37 100.0 34 ..................................... TCACTCCCAAAAGCACGTTGTTAAAAACGCTCGC 720731 37 100.0 35 ..................................... TTATATCCCCACTGAAAACCTTAAGGAAGTTAAAC 720803 37 100.0 36 ..................................... CAGGCTGTAAATATAGTCCTGCTTTCCATTTTTCAG 720876 37 100.0 35 ..................................... CTGCCTAACGAAAACTACCTAACTTTTAGCCAAGA 720948 37 100.0 34 ..................................... TTTTGCCCACCCTCTAGAAGCCATAATTACCCCT 721019 37 100.0 34 ..................................... TTGAGCCAATCCTTAGCAGAGGCTAACACTTCTG 721090 37 100.0 41 ..................................... CGGGGATAAATCAGAGAATTGTAAGGGTGCGGCAGAATCAA 721168 37 94.6 0 ...................................GT | ========== ====== ====== ====== ===================================== ========================================== ================== 48 37 99.9 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTTGTTGTCAGTTACGACATTTCCGATGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCTAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGCATCGGTGGTGAGTTACCCCGGGATAATACAATTTTTTTTGTTTAGCTCGGTTGCGCTTCCGGGTAGCTGTAAAAATCCTTAACTATTATCTGGTGGCTGAAAAGCTTATGCAATATAGATTCGAGATGATTTTCCTTTCCAACGCGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGGTCTTGAAGAACTGGGTCACTTGCTGTATGATTGGTTTATTGCGGGTGCGGCGCATACGAACCTTGAAAATCCCATAACGTATAGCTTTTACCACTGGGCG # Right flank : TGAAGGGAATTTCTGAAATGGAATTCAGTCTGTCTATATTTGACTATACTTTTACTAACTAGGGCTTGCTGAATAATGGTAAAACCCTTTGAAAATAAGGCTTTTGACCTGTTAAAATCCGATGTTCATGCTGCGAAAATCGGATTGGGACCCTCAAAAACCTTGCATTATCCTTCTTATAGTACATACTCTGGTACAAAAAGAGAGGGCAACAAAGCCTGAAACGACCGGCTACTGACGACCGACGACCGGCTACTGACTCCTAACCCCACCAACAAACTTTTTGCCGCAAACCCTATCTAAAAATCAAACTCGTCTAACCCCGGTTGTGGGGGAGGAAAGCGACTGCGAGGAGATTTTTTCGACTTTCTCAAAAAAGCGGGGATAAATGCGGCCATAAAAAATCCAATTCCCAAAGAAAAAGCCAATAAAACACCGATAGGTACTTTAATTGACTCAAATTGTAGAAACTTTAAAGAAACTGGTTGGATATTTTGAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 3754332-3754062 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP019314.1 Microcystis viridis NIES-102 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 3754331 36 97.2 42 C................................... TCTCGGTGGACAAGCTTCGATTAAGAAGTATCAGTTAACTCA 3754253 36 100.0 38 .................................... GAATTTGACTGGTCTGAGCGCACCGCTCAAAACTTTAT 3754179 36 100.0 42 .................................... AATAAGAGTAAGGCTAATTAATGAATTAGCCTTAGTTTTTTA 3754101 36 83.3 0 .................A....AT....T.C.T... | TT,T,G [3754069,3754079,3754082] ========== ====== ====== ====== ==================================== ========================================== ================== 4 36 95.1 41 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : CTATCTCTACGATGCTGCCCTCGACGGTGGTGAAGTGGGGATGACTGGCTCTGGTGCTACCCATGCTTGGTTACAGGTTTATCTACCGGGGGCCGGTTGGCGTAATTATGATCCGACTAATCAAATTACCGCCGGCTTTGATTTAATTCGAGTGGCGATCGCTCGTCATCCCGGTCAAATCATACCTCTTTCTGGTTCTTGGTTTGGTGATGCCGATGACTATTTATCTATGGATGTTAAAGTGACCATTCGCAAGCTGGGGACGCTGCCAGATTTTGATCCGAGGGAATAGGTTGAATTTCGGGTTTTTCCTTGACCGGCGATCGGTTTCTGACTCCCCCAAAGGAAAACTTACTACTTCACTATTAGGATAACTGCTAAGGTGTTCGTAATTTAAAGCGAATATTCCCGTTAGGTTTTAGCATTTTTATCGATTTTTGTCAAGATATATTTGACACAATTTATTAGAAAAAGGGTTTCTTTTAGAAACCCTTTTTCTG # Right flank : TACTTAACTATAAACGGGATTATTTCGGCCAAAGTTTTTGAAATTTTCCCTCTTGACCATTATTCTCGTCTAGAAAACCTAGAAAATAAGCACAATCATCAGAGTCATCAGGAAAAATTGTTAATAATTCTAGGTATTGATGATTATTTTTGGGATACATTCGATGCCAAAGACGACCAATTTGATTGATATTTACTGTCACCGAGGTTTTATAGATACTTAAATTATCCAATTTTTGATAGGCTTTGTGAAGCCATGTTATGGCTAGGGAATCATCTTTATCTTCGGCAATTCTTCCCCAGGTAATGATTCGGTAGTAGTGGCGTAGCTCTCTTGCTTACCTGGTATGAATTGTGTAAAATATTTATTAATAAAAATAATTGCAACCCGCTCAGTCTTTAAACCTCTAGCTTGATCATGACTTTTCTGATAAATATCTTTTTCTGGCTTCTGTCTGGCTTACTCAAATATCAGTCTAGCACCGAACAAAATCCCCCCTT # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //