Array 1 134-386 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOWI01000138.1 Leptospira interrogans serovar Pyrogenes str. Sri Lanka 14 ctg7180000006921, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 134 36 100.0 35 .................................... CTGAACAACGATCCGCATTTCGCAACAACGATTTT 205 36 100.0 36 .................................... AGTTGATAGAGCGGTACTTCTAAAACTTTTTCCATC 277 36 97.2 37 .....................T.............. TGTGTATATCTTGATTTACTCAAAAGTGATAATTCTA 350 36 88.9 0 .....................T........T..G.T | A [378] ========== ====== ====== ====== ==================================== ===================================== ================== 4 36 96.5 36 CTGAATATAACTTTGATGCCGGTAGGCGTTGAGCAC # Left flank : AAATAAATGTGGGAACTCCCACTTTGAAAAAAGAAGGTTTCTGCGTCTCTTAAGTCAAACTTACAAAAATCGGGATGTCGGTAGGCGTTGAGCACGAAGGCGCAATCAGCAATATTAAGATGGGTGGCGTTCTC # Right flank : TGAAGAGAAGATTTGTTTTAACCCAAATTGTTTTACACAAACGTGCAAACGGATAAAATGTAGGAACTACTGCTTTTCCGAAAAACGGTGCTTTGTTCAAATAAATGTGGGAACTCCCACTTTGAAAAAGAGAGGGTTCTAAGTTTTTTGAATCGAACTTACGCCAACAGTATGTGTCTACGCATTTGAATTGACCTGCCAACAAAAAAGCTCATACTACTCGTATGAACGATCCGCTGCATCCCTATACAATTCGAAATGTACCGAAGGATATGCACTATAAATTGAAAGAATTTGCAAAAAGAGAGGGAATTAACCTCAATGAAGCTATCCTTATACTTTTAGAGAAAGGAATAAACTTAAATCAAGAAATGTCGGAAAACCATGATTTAGATTGGATTTTGGGAACTTGGGTAGATGATAAAGAACAAAACGAAATTTTTGAGGATTTAAGAAAAATAGATCCCTAATTAAAGCTGCTACCATTTAAAATTTATTGG # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAATATAACTTTGATGCCGGTAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //