Array 1 5891-8773 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFLQ01000007.1 Lachnoclostridium sp. An118 An118_contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 5891 32 100.0 33 ................................ TTGTCTGCTCCCCATATTGCACTGGATAGCCTC 5956 32 100.0 35 ................................ CGCTTTATGCGTGATTGTTTGGGGCGGATAATACC 6023 32 100.0 34 ................................ AAAGACAGCATGAAGGTGGCTGAAATGTTCATCG 6089 32 100.0 33 ................................ GTAAGAAAGCCAGATGGCGGAGGTGGCGGAACT 6154 32 100.0 34 ................................ CTATCCGGCGTACTCGGGGAATGTACGTGTTAAC 6220 32 100.0 35 ................................ AACGCAGTACGCGGCAGGACGACAGGATACAGGCG 6287 32 100.0 34 ................................ ATGTAATCGAAACCAGATATGCCTGCCGGAATTC 6353 32 100.0 35 ................................ CAATCCACCGCAGAACAATCCGCAACTGCATAGAC 6420 32 100.0 35 ................................ GATGATGCGGTGGACTACATCAGGAATTGGATGCC 6487 32 100.0 36 ................................ AAACGGATATACCGATTTCGTAGACGTCCGGGAAGC 6555 32 100.0 36 ................................ ATAATCTTCCAGCACCACACGTTCAAGAAGTTCGAC 6623 32 100.0 33 ................................ GTGAAAACTCTCATCAGCTTTTCCAGGACCCGG 6688 32 100.0 34 ................................ GACTTATCCGACAACGAAATGCACATTGGGTATA 6754 32 100.0 34 ................................ GATACGAACGACTACGAGTTCGCTGACTGGGCAA 6820 32 100.0 34 ................................ ACGCATGTTGCTGTAATTTCTATGTCGCTGGTAA 6886 32 100.0 33 ................................ GTCAAAACTCGCCGTTGTTTTGTAGTCGTTTCC 6951 32 100.0 35 ................................ ATCACCAAGTTCTACAAGAGCGGTATCGGACAAGG 7018 32 100.0 33 ................................ ACGAGAATACATTGGACATCGTAGTAGAACCGA 7083 32 100.0 35 ................................ GGCGTATCTCGTCCTGTGATAATGCCGGGGCTTGC 7150 32 100.0 35 ................................ TGAAATCAGGAAAAGCGACAGGGACTACAAGATTG 7217 32 100.0 33 ................................ GACACTCCTACCAATAAGCTAAAATTTAACAAT 7282 32 100.0 34 ................................ AATGCATCTGGAATCGCCCAAAGAGATGCGGCAG 7348 32 100.0 33 ................................ ACGATTGACATCCACCGAGGCACAGAGGGATAT 7413 32 100.0 33 ................................ ATCCCTGTGTGCAATTCCCTTCTTGAGGACACA 7478 32 100.0 34 ................................ ATCGAAATCGGAAAGGCGATACATATTGACCTGG 7544 32 100.0 34 ................................ GCGAATATCATCAACGACAACTTCCCGGTTATCC 7610 32 100.0 36 ................................ ATTTCTCGATATGGATTCCCCTGTAACCGGAAACGT 7678 32 100.0 35 ................................ ATCAGTAACGCCACGGATGTGAGCATTTTCAACTC 7745 32 100.0 35 ................................ ATCAGTGGAACAGCTATGATTACGTTTCACAGGAC 7812 32 100.0 33 ................................ ATTTTGAAAAGGAGAGATGAGACTATGAAATTA 7877 32 100.0 35 ................................ AACATCCTGACCGGTAAAGGCGAGAAGGGGCAGTG 7944 32 100.0 37 ................................ GTCGTATATCTCCTTCATGTTGTCTATGAACATCTCA 8013 32 100.0 35 ................................ GCATCTTGATAAAGTTATTAAAGTTAGGACAAATC 8080 32 100.0 34 ................................ ATCACGTCACTCCCCGGAAAAGCAGTGGCGTGGG 8146 32 100.0 33 ................................ GTCCAAAAGAGGGTACAAGGATGCGGCTAATCA 8211 32 100.0 35 ................................ GTAATCCATTCAGCCAGGTCTCGGATAGTTGGTAT 8278 32 100.0 34 ................................ TTCAAGGAGTGCGATGATCCGCAAAAGCTGCAGG 8344 32 100.0 35 ................................ AAAACGTACAGCAAATGTGCTATTATCATGTCATA 8411 32 100.0 33 ................................ GTCAAAAGGTCAAAGTTCATTACTCCTCACTCT 8476 32 100.0 33 ................................ ACCTCAGATAACATTGACGACATTGTGATCTTC 8541 32 100.0 35 ................................ AAAACGTACAGCAAATGTGCTATTATCATGTCATA 8608 32 100.0 36 ................................ TTGCCGGGGTGATGTTCTGGGGAACGATGGGGGAAC 8676 32 100.0 34 ................................ CATGCCATCCCCGCCACGTGCGGGTCATGTCGCT 8742 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 44 32 100.0 34 GTCGACCTCCTTGTGAGGTCGTGAATTGAAAG # Left flank : GGATGAATACCCTCCTTTTTTATGGAAGTAGGTGATTAGAATGCTTGTGCTTATCACATATGATGTGAACACGCAGACTGCTGCAGGCCGGAAACGCCTGCGGAAAGTGGCAAAGCAATGCGTAAATTATGGGCAGCGAGTGCAGAACTCCGTTTTTGAATGTCAGCTTGATGCGACAAAGTACCGGCAGGTAAAGGCAATCTTAGAGGATATCATTGACAAAGAGGCAGACAGCCTGCGGTTTTATAATTTGGGTGATAAATACAAAAGCAAAGTAGAACACATAGGAATTAAACCGAGCTTTGATGTAATGGAAACATTGATTTTCTAGTGCGGATGTGGAGTGCACAGAAAATACCAGGGGATTCGCACCGAAAAGGAAGGACATAAATAGTGAAGTGACAAGAAAATATCATTAAAAGGGAAAAACAGGGCCATTGTTTTGTGGATTATGAATAAAATATTTGCGTTTTTTCTTGAAAATTTTACGCAAATTTGCT # Right flank : GGTGTGTAAGGAGAGATTATTATCCCTCTATCTTGCGACGCCGATGCTACACTTCCCAGCCTCTGCATATACTGATAACAAAAAGGAATTTTTGCAATGCAATGTGAAGACGGATACAGAAAGAAGAACTGTCAGTGTTCAAAGAACTGCCCGTGCTGCCGTCCGGGCCCTCCCGGCCCACAGGGCCCGGCGGGGCCGCAGGGAGAACCCGGCCCACAGGGACCGGCAGGGCCGCAGGGAGAACCCGGTCCTCAGGGGCCGGCAGGAGGGACGGATAATCTTCTGAGCGCCTTTGCCACGCCCCCGCAGCTGGGAACTCCGGGGATGCCGCTTGTTTTTGACAGGAACGGTGCCGTCCTGGGCGATGCGGTCGTCCACGGGCAGAACAGCCCGGATATCACCATCCGGCAGCCGGGCACCTACTATGTCTCCTTTCACGGGGCAGTCACCCCGGGACCGGGCGCTGCCTTCCCCCTGAGCGTGAGATTGTTCCTCACTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCTCCTTGTGAGGTCGTGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : NA // Array 1 3794-3562 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFLQ01000032.1 Lachnoclostridium sp. An118 An118_contig_32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3793 32 100.0 34 ................................ TGGATCTTCCTGCGCTCTTCGGCGTCCGCCGTGA 3727 32 100.0 34 ................................ TCCGGTCTCCCATCTGAGGTTTAAGCCCTGGGCC 3661 32 100.0 36 ................................ GGAACTACCTGCGTGCCGAAGTGGAAGACGGGACTC 3593 32 96.9 0 ........................G....... | ========== ====== ====== ====== ================================ ==================================== ================== 4 32 99.2 35 GTCGCTCCTCTTGTGGGAGCGTGGATTGAAAT # Left flank : GTATTCCTTTGGAAGTGAGGTGTGGAAATGCTGGTGTTGATTACATATGATGTGAATACTGAGACTGCCGCAGGGAGGAAGAGACTGCGAAAAGTTGCAAAACAATGCACAAATTATGGGAGACGAGTGCAGAATTCTGTTTTCGAATGTATTCTGGACAATGCGCAGTGCATTACCCTGAAGGCAATATTGGCAGAGATTATTGATGAGAGCGTTGACAGCCTGAGGTTCTATTATCTGGGAAATAAGTATCAGACAAAGGTGGAACATATGGGCGTCGACCGAGGAATTGCAGCAGACGATACTTTGATTTTGTGATCATACAAGAGTGCGAATAAGAAGCGTACATGAAAACGTCGGGAGATTCGCACCTTAAAATGTGCACAAATGAAGTGGAGTGAGGAAAAAAGAGGGGATGGAAAAGGGGAAAATTAAGTATATAAAATGATAATTTGTTGATTTCTGCTAAAAATGGAAAAGGCTTTTTGGCTAAAATTGCT # Right flank : TGCGCAAAGGCTTTTCGGGTCTTGAGCCGTTCTAAGTGTGGATATGCTTCAACATATTTCCTTCTGATTTCCTGGTATCTGCTCTCTGTTGTTTTAATTACTTTTTGGTGATATTATAATGCATCAAATGCAATATCAATATGCGAATACATCAAAAATAAAGCGGTTTGTACAGAAACGATTTGTGCATTATTTGTAATGTAAAACTATTGAAAAACAATTAAAATTAATGCATTCTTATTTATACATATAGAAGGAGGTGGAATAGGTGTTTGTATATAAATTTAATGTATTGGACAGTTTAAAAGAAGCTGGTTATAACACAACAAGACTCAGAAAAGAAAAGCTTTTGGGTGAAAATGCAATCCAGTCTTTACGCCGGGGGGAAATGGTAGGAATTATTGAACTTGAAAAGATTTGTAGACTTTTAGATATGCAACCGGGAAACATTATAAAATATGTAGATGATACTCCTGATAATAAACATTAAAAATGATGTA # Questionable array : NO Score: 8.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCTTGTGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 1 94492-94890 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFLQ01000008.1 Lachnoclostridium sp. An118 An118_contig_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================== ================== 94492 38 97.4 35 .T.................................... GTTTTTTCAGGATAACGTTTTTTCATAGTTTTACT 94565 38 97.4 34 .A.................................... ACAGGAGCAACCTCAACGGGTTCCTCTACTGTTT 94637 38 100.0 34 ...................................... ACAGGAGCAACCTCAACGGGTTCCTCTACTGTTT 94709 38 100.0 34 ...................................... CAATCTGTACGCCTCTATCAGTCGCAATACTGCC 94781 38 100.0 34 ...................................... ACCCCTTTATGTAAGGTTCTAGTTGCAGCTAGGA 94853 37 81.6 0 ...............-.......CC.........TATT | G [94865] ========== ====== ====== ====== ====================================== =================================== ================== 6 38 96.1 34 CCGTAGAAATGAAAGAAGCCCGTTTAGGGCGTTGACAC # Left flank : GGAGCCAAAGAAAACCTATAGAGTGCGGATTACCTCTCAGAGCCGACCGGCAAGAAATGAATATTTCTATGAGTATGATATAGAAGTTCTGAGTGAACCGGCTCTAAACAAGAAAAGTAATATTATTACTGCAAAGAAGAAAATATTTCTGAAGCCGGGTGATGAGGTGGAAGCAGTGAAGTTTAAAGATGGGATTTTTAACCTGAAGCGATAGTGCAGCTATAGATGTATGTGGTTTGGCAGCAGGCCATTTCTGGCCTGCCGGCAAACCATCATACAAGGCATTGAAATGTGCGTAAAGAAACAAAAGGGGAGCTGACTTTCCGGAAAGCGAAGAGGTATAATACCTGTAAGGAGGCAGCGCAAAAGCAACTGCAAATATGAACAAATTGTAAACATGCCAAAAAATGTTGGAAAAACAGTTGATATCAGAATATTCTGATAAATACCTGCAAAAATGAGCCCGGGAAGCCAGTGTTTATGCGGGTTTTAGAAGGGTA # Right flank : TGCCAGCTCTTCACAGCATGCAGAGCGGAGAGGAGGCGCAGGATGAAAGCAATGCATAATCATTATTCTAAGGAGGTAATATATGAAACAGGAACTGATTACTATGACAGAGAAGTGGAAGGGATTAGAGCGAAAGACCGTAAAGCAGAGGGAAAAGGCTGATAATTTTTATGAGACAAAGCTCATGAAGCTTATCGAAGAAGAATTTGTAGCAAACAATAGCGAAAAGGTCTATGAGAAAGTTGAATATTTGATCATGTCCGTGGGGACGTCATACGAACCGCTTGTGCTGGATATCCAATTATTGCAGCCCAGGCGGATTCTTTTTCTCTATACAGAGACAACGGAGAGTGTCTTGAACAAGATAGCGAAATACTGCCAGCTGGATCCGGTGCGCTATTCCAAAAGACAGGTCAATGAGACGGACCCGCTGGATGTCTACAGGGAAATCAAAGCCGCGTATTTAAAGTGGAATCGTCCGGACAAGCTGTACATCGACT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTAGAAATGAAAGAAGCCCGTTTAGGGCGTTGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 100748-101466 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFLQ01000008.1 Lachnoclostridium sp. An118 An118_contig_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================================================= ================== 100748 35 100.0 39 ................................... AACATAGATCTTCATCTGTGCGTCATAAACCGCATAAAC 100823 35 100.0 35 ................................... ATCCCTTTTATAGCATTCAGTGCATCATCTGCTGA 100894 35 100.0 36 ................................... ATGACTAATTGCCCAGCCATCTTCACAAAAGCATCT 100966 35 100.0 38 ................................... CCAAATAGCATCATATTTACCGCGTCGGTTACTACATC 101040 35 100.0 34 ................................... ATTTCCTAAAGTGTCAAACGGTGCTGTTTTTAAT 101110 35 100.0 36 ................................... ATACTTCTTTAATTTTCCGTCAAACATTTCCTCTAA 101182 35 100.0 65 ................................... ACTAAGGTTTGAGATTCTGCACCACATTTCTAATTTAGGTGCAAATGTCATAGGTTTCATGAGCA 101283 35 100.0 39 ................................... CTATATGGTTTATTAAAGTATTATACTGAAATATATTTT 101357 35 97.1 37 ..................A................ ACTTCTCTGATTTCTTCTTTTCTCATTCTCTTTTCCT A [101369] 101430 35 77.1 0 ............A......C.....A.A..A.AGG | A,A [101439,101460] ========== ====== ====== ====== =================================== ================================================================= ================== 10 35 97.4 40 GTAGAAATGAAGGAGCCCGTTTAGGGCGTTGACAC # Left flank : AGACGGAGCTTCAGAGGATATTTGACAGCGCGGGCATTGACTGTCTGGAGATTGAGATGGGTATGTTGGTGAGAAGGAAGCAGGGGGATGGGTATGAATGGCTGATTGAATTATAGGAAGGAATGACAATATCAAAAAGATCAAGCCCAACCTGTATGGCTGAAATATTACAGACATTTAAAGGCAGCTACTGCGCCAGGGAGTATATCCTCTCTGGCGCAGTAGCTGTTAGATCTGTAAAGGAAAATGACTGAAAACAAAACATGAGCGACTATCAGCTGAGTGGCCATCAGGACAAACATCCGGACAAAAGACTTTTCTTTGCAAAAGGTTTTAGGTATAATATTTGTGGGGATACGATGTGTAAGAGTCGAAAATATGAACAAATTGTAAACATGCCATAAAATGTCCGAAAATCAGTTGATGTCAGAATTTTCTGGCAAATACCTGCAAAAATGAGCCTGGGAAGCCAGTGTTTATGCGGGGTTCAGGAGGGTACT # Right flank : GAGAAATGCCAAAAAAACGAGACACTCCACACACGTTAGTATGGAATGTCTCGTTTTTTAGTAATGTAAATATGGAGTCCATTTTCTACGTTCAGGTTAAAGCTTCTGCATCTTCAGAAGAGTAAACGGCCAGTGCGTCTTTGTATAATGTTTGAAAATGACTGCGAAGCCGGTCAGGAGAGAGGATTTCGGCGTCTTTACCAAATTTGAAAAAATAGTATTCAGCCTGTCTGAGCGTGCAGCGGAAGATGTATTCATTTTTATCAGCCAGCTTTTCGACATATGCAGGTCTCATATAAATCTGAGAATTATATTTGTGAACGCCCTCCTCTGTTAATCGAACATGGATTTCCTCCTCTTCACCGAATAAAAACTGTACGGTTCTGCTGGAAATGGCTTCTTTGAGAAGCTCTCGTTCCGCCTGTGTAAGCTTCCCGCTCTGACGGAGAAGCTTAATATCTTTTGCGTTAGGGATCCGAAAGGATGCACAGGATTTTCGA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATGAAGGAGCCCGTTTAGGGCGTTGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA //