Array 1 9024-7336 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUTB01000133.1 Lacticaseibacillus rhamnosus strain 784_LRHA 454_27565_1149298_328+,...,154+, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 9023 36 100.0 30 .................................... TCATACACCACTGTTCAGTATTTACACTCG 8957 36 100.0 30 .................................... AACATCTTTTTTGTGTGCGGAAACATAGTC 8891 36 100.0 30 .................................... GTTTCAATTGATTTGGATATAAATTTGTTT 8825 36 100.0 30 .................................... TTGAATAGTGTTATTCAGGGTATGCAAGAC 8759 36 100.0 30 .................................... AACTGTTGATACTCTTGAATATAAAGGGGT 8693 36 100.0 30 .................................... CTGATTCGCAAAATCCCGGGCGTGGGCTGA 8627 36 100.0 30 .................................... TGGCTGGCAAATTGTTGGAGATGCTTTTGC 8561 36 100.0 30 .................................... GGGTTATGGGGCGTTAAGCCCATTGATTTA 8495 36 100.0 30 .................................... CAAAAATGTCAATGTGTCGATGACCTGGCT 8429 36 100.0 30 .................................... TTTGGCTACAAGCATGACCCAACGGCAGGG 8363 36 97.2 30 ........C........................... GTGTCCAACTTAATATCTGACCACTTAATA 8297 36 100.0 30 .................................... TGTCTCCCACGGAAAAGTGGCACCTAAAAA 8231 36 100.0 30 .................................... TCTTCTGCCATATCCTGACCCCCTTAAAGA 8165 36 100.0 30 .................................... CATAAAAGTGATTAGTGTCGATTGGCGTGC 8099 36 100.0 30 .................................... ATGCTGGTGATGACACCGACAACCAGAAGG 8033 36 100.0 30 .................................... ACGATGAAGAAACAGAAGAACTTGACGGCG 7967 36 100.0 30 .................................... CGATTATTGCGCCAATCACCACTGGGTTCA 7901 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 7835 36 100.0 30 .................................... GCCAATTGAATAGGCCAGACAAAAATTGCC 7769 36 100.0 30 .................................... TGTATTTTGTACCCCCGTGTTACTTGACGG 7703 36 100.0 30 .................................... GACTTGGCGGATCTCGTTGTGCTTATTGCG 7637 36 100.0 30 .................................... TGATGGTTTTGCCGTCCGGCTTGACAATCC 7571 36 100.0 30 .................................... ATTTCGGCGATGGCCGTCTATCTAAAGATA 7505 36 100.0 30 .................................... GGCCAGCGACTGGGTGCAACAATTACTGTT 7439 36 100.0 30 .................................... CTTAGAATAGCTTTATTGATTTGGTTATTT 7373 36 83.3 0 ....T..................AA.C....G...A | T,C [7339,7345] ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.2 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGATGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAGAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTAAACAAGCTGTTAGATCAGGTTAAGGACACATCGTTAGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTGGAAAGTTTTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTCATGGATAACCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : CCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCATTGTCAAAAGCAAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //