Array 1 712-1715 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNQ01000036.1 Tissierella pigra strain WCA3-693-APC-4 seq36, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 712 29 100.0 36 ............................. AAGTCAATGGCTAAAAAATCCTCTCGTCTATTCAAG 777 29 100.0 36 ............................. TTATTAGAGGAATATTTTAGAAGACACTCATTGAAT 842 29 100.0 36 ............................. TGAATGAACATATTCTATAACCTCAGTTAGTATTGA 907 29 100.0 37 ............................. TGTTATTAAATACGTCCATACAGGATATATCTTCTAT 973 29 100.0 35 ............................. CCAACGTCATAAGGTTCAAAGTTAGTAACTGACTC 1037 29 100.0 35 ............................. GAGGTAGCTTGTCCAAGGAGGTTTATTTATTCAAT 1101 29 100.0 36 ............................. CCTAAAAGTAGAGAAACTTTAAAACAAGCCAAAGCG 1166 29 100.0 35 ............................. GAATCTAGCCCAAGTTTAATCCAGTTAAGACCCAA 1230 29 100.0 36 ............................. AATATCACAAGTAGTAGACGCATGGGCAAAACAAAT 1295 29 100.0 38 ............................. TTAGGTAAGTTATTAAAGAGGGGTTTTAATACTGGTCA 1362 29 100.0 36 ............................. AGAGTTATCGACAAATTAGTCGAAAACCCTAAAGGT 1427 29 100.0 36 ............................. GATACAGTATTTATAGATGAAGAAATAATCATGTGT 1492 29 100.0 36 ............................. TTAGCACATTCTTGTTTTCTATGCAGGTTTCTCTTA 1557 29 100.0 36 ............................. ATAGTTAACGTTGTCTATGTTGGTATTTTCTGTTGT 1622 29 100.0 36 ............................. ACTAATTTACATGATGATGTATTAATATATAACGGC 1687 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 16 29 100.0 36 ATTTACATTCTAATATAGTTCTATTAAAT # Left flank : CTAAACTGTACTAGGTCTACAACATCAGGATAGTCCTTAAACATTTCTTTATAGTAATTCTTATCTTTCATTTCTAAGTCAGCCCCCTAAATTAACCTTGTCAGTAGTAGACGCTGGCTATGTAAATTCCATTTATATCTAATAGGAAGGGAAATCCCTCCATATCCTTCCTAATATCCCTCTAAAAGTACTTTTTCTTGCCAAATCATATATTTTTAATTAGCCCAATGATGGCAGTAAGAACACCCCACTCGCCCCTATAAACCCTGTATTTTATGCGTATTTTAAGGCTTCTAAGTTCCAGTCTGTTCCACTACATTCCAAAGGCTTCCAAACAACTTCAAAGACTCAAAATCCACCGGTGGCAACACCGTGCCGGTTCGAATCCGGCCACCGGCATTAGTTCTTCTCGCACAAACAGTAGAATATAAAAGAAAAGATAGGAATTAAATCCTATCTTTTTTTGTTTTTATAAACTTCTAACAATCAAAACACTTGCA # Right flank : TGCGAATCTTTTGGTTGCCTGGTTTCACTAGGTTATATAGGTAGTTTTTGTCGACCTATCAATTTATTTGTAATATTATTTTATTTTACTGCTTGTTATTATATCTAAACCTATCATACACATCTATTTATAATGATTTGTCAATCTACTATAATATTTACACTATTATAGGTAGACAATATATATTCTAAAAAAATTAAACATTTTATCATGAACTATTACAAGTACTATATATCAAATAAGTTTAAAAATAAATTAATTTGTAATCCTATAAAAATATATTGCAAAAGAAATTTGCTATAAATTGTGCTTATTATCCCCAATTTTCTATTGTTGTGTTTATACATTTAAATCCGTTATTCAAATATAGCTGAATAGCTTCTTTATTCAAGTCTGCAACAAATAAAATAATTTCATCAGTTCCTGTTTCCTGTAGATGATTAATAGCAAAAAATAAAAGTTTCTTTCCATATCCTTTATTTTGATATTTAGGATTAACA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCTAATATAGTTCTATTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 8005-8629 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNQ01000047.1 Tissierella pigra strain WCA3-693-APC-4 seq47, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================================================================================================= ================== 8005 29 100.0 34 ............................. TTAATTTTTTTTTGATTCCTTCATCTAGCATTTC 8068 29 100.0 36 ............................. AGGAATTTCTGATAGATCTGTAGGCTATTATGAAAA 8133 29 100.0 36 ............................. TAAATAATGACGGAACTACAGAAGTAGTAGATGTAA 8198 29 100.0 36 ............................. TGTGTCAATATCTTTATTCTTTTTTGCTTCTTCTTT 8263 29 100.0 36 ............................. TGTATTGTTTAACCCATCTATTACAGGAACAAACAT 8328 29 100.0 36 ............................. TGAGATAATGTTTGAAACTATAGAGGATAGAATCGT 8393 29 100.0 177 ............................. ACGAATCTTTTGGTTGCTTGGTTTTACTGGGCTGTATGGGTAATTTTTGTCGACCTAGCAATTTATTTGTAATATCATCTTATTTTACTACTTGTTATTATATCTAAACATATCATACACATCTATTTATAATGATTTGTCAATCTACTATAATATTTACACTATTATAGATAGACA 8599 29 75.9 0 ..A..........A.A.A..A....TT.. | AG [8619] ========== ====== ====== ====== ============================= ================================================================================================================================================================================= ================== 8 29 97.0 56 ATTTACATTCTAATATAGTTCTATTAAAT # Left flank : ATAGTTCCCCTATGTAATAACCTTAATACCTTATACCATTCTGGTCTATTAGGTATGTAATTAAATTCTAGTTGTTTTCTTATAATTTCTTTATTATCTATGATAAAGTTTGTATCATCTTTCAAAAGAACTATACTGTTTTGCAAATCTTGTTGTGAAATTGTTTCCCTTATGTCCAAATCGACAGAAATGTTATCCTGATAGACCAAGATTAATATACCTTTAGGGTTTTCAGTAAAATTTATCATTACGGGATTACCATAGAGTGAAATAATTTCATCAACTCTATGACTATCAATGTTGCCTAAAATTATTAAGTCTATGTCAGAAAATTTTGTTGCTGCGCCTCTTGCTAAAGAACCCTTTAAAATCATTGAAAATCCATTATTTTTACAAAATTCATAAACAGATTCAATATAACTTTTATAATTTGATGAAGGATAATCTATTTCAAAATTAAGCATAATAGCCTCCTTTCTAATCAAAGACAATACTAGCTC # Right flank : TCATGAACTATTCCTAAAAAATCTTTTTCTACTTATCTTTCATTTTCACTTGGAAATATTAGTTAAGAATATCATATACAAGTATTATATATCAAATAAGGTTAAAAATAAATTAATTTGATATTATTTTATATTAAATTAATTTAAACGGTAATTTATAAGAAGTTTATATTTTTCATCATAGTATTATTTCAACTTATCCATATCCTCTAAAGTATATTTGTTTTTATAAAATTTCTAATTTAAGTAAATATTTTATTGTAACACTAAAAGTTATAATAACCCCTAGTGTAAATTCTATTACTTCCACTAAAAGCAGTATAGACACATTTTTCTAGTTAATTCTCTACCGCCTATATAGTTACCCCCTAGAAATATATTCTATATTTATTTAAAAATTTTTTTAAAAATAAAAAAGAACCTAGATTTTGATATGATACTTCTAAAGTAGACAGTTTAATTAATTAAAATTAGATTATCTACTTGGAGGTATTTTTTAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCTAATATAGTTCTATTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 21552-26520 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNQ01000004.1 Tissierella pigra strain WCA3-693-APC-4 seq4, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 21552 30 100.0 34 .............................. TAACTTTTTCAACAAAGATGTATTAGTAAGAGTA 21616 30 100.0 36 .............................. TCACTTGCATAAAATCGAAAATACTGATGACATAAT 21682 30 100.0 36 .............................. AAATACAGAGACTAGAATAGCAAAAATAAGCATAAA 21748 30 100.0 36 .............................. TTGAGTCATGCCATAACACTCTTCTTCTGTTGCTAA 21814 30 100.0 35 .............................. CAAGGGGGGTTCGATTTAGGATATGGAGAAAGCAG 21879 30 100.0 35 .............................. CATAGATTAGATAATTATATAAAGATAGTTGAGGG 21944 30 100.0 36 .............................. TTTTTTAGATAATATCTCCTTAAATGAGTCTAAAGT 22010 30 100.0 36 .............................. TAAATTTTATAGGCTTTCTTTCAGTAACAAATACTG 22076 30 100.0 35 .............................. CTAAGACCATGCAAGAAAATAGGGTGTAGTAATTT 22141 30 100.0 36 .............................. CTTGTCGGAAGTGTATTTGGTGGCATGTCGTAGTAC 22207 30 100.0 36 .............................. TTAAGAGATACCCCTTGTTAGGAACAATAGCGGCTG 22273 30 100.0 36 .............................. AGGACGAACCTAAGCCATTCGCTATAGGTTGGGAAG 22339 30 100.0 36 .............................. AAGGCTCTGTCTCGGGATTAGTCGCTACTACAACCC 22405 30 100.0 36 .............................. GTCATAGAAGGATTAAACAATATGATTGAGAAATTT 22471 30 100.0 36 .............................. GAGTTTGATGCACTAGCAAGTGGTCCTAATGTACTT 22537 30 100.0 36 .............................. TCAGCTTCAAATCCTAAACTTGATACACTGGCAGCT 22603 30 100.0 37 .............................. TTACATTCAAGATAAAATCTAAATCTTTGTAGGTCTC 22670 30 100.0 36 .............................. ATCAATCCTTATATGCAGATATGTTAAATACAGAAG 22736 30 100.0 35 .............................. GTAAATAAGGAATCAAAGGGAAAGAGTCCTAGAGA 22801 30 100.0 36 .............................. TCTAATGAAACTTTTTCTAAATCTAACAAAGCCTTT 22867 30 100.0 35 .............................. GTTACATTTAGAAAGACTATGATTACAAATGATAG 22932 30 100.0 36 .............................. ACTATTTCAGGTACGGATCAGAATTTAGGAGATAAG 22998 30 100.0 36 .............................. CAATTTGTGATTACAAGTATTTCATCAGACAATATA 23064 30 100.0 35 .............................. GGAGAAAACTATATTTCTTCTTTGAATTCAGTGGA 23129 30 100.0 36 .............................. CTATCAATAAGAGGATTAGAACTACCTTTCATGTTT 23195 30 100.0 36 .............................. GGTAAAAAAAGTAGATGAAGAAAACTATATTATACA 23261 30 100.0 37 .............................. TCCTTATAATAATATTGCTTTCTATTAAGAATATCGT 23328 30 100.0 36 .............................. CTTTCTGCTGTATAGGGTCGGCACCTATATCGTTAG 23394 30 100.0 36 .............................. AAAGGAGATAAACAAATGCTTAAATTAGTGAAAACA 23460 30 100.0 36 .............................. TTATTATATTATACTATAAGGTGCTATAAGTTGCAA 23526 30 100.0 36 .............................. TTCAAAATCATATGAGCTACTAAGACCAACTGGTAA 23592 30 100.0 36 .............................. AAAGAATTTATAATGAATTAATAGAAGGAACTAAGA 23658 30 100.0 35 .............................. TGATAAGAGACACGCCAGTATTGACGGATAAAATA 23723 30 100.0 35 .............................. TCATAAAATAGAACTAACAGAAGATAATGTAGATG 23788 30 100.0 36 .............................. AAATAAGAAAGTTATCAGCCAGGACTGGTGGTAAAG 23854 30 100.0 36 .............................. TTCTCTTAACTTATTCCATAATCTTTTTTCACCGAT 23920 30 100.0 36 .............................. GCCAAAATGGAAAGTACAAAAAGAATAGATGGGACA 23986 30 100.0 36 .............................. TTATTTATCCTCAATATGAAATAGTGAGAACAAGGG 24052 30 100.0 36 .............................. ATGATAAAGGAGAATGATTATGAATAAAGTGATAAG 24118 30 100.0 36 .............................. TTTTAGTCATATGGATAAAATTGCTAACTATGGCTG 24184 30 100.0 36 .............................. ATATATTGTCTGTAGTCTTGTATAAAGCTTCAGCTA 24250 30 100.0 36 .............................. TAGTCTTTTTATTGTTTCTGTCATTATATTAAAAGA 24316 30 100.0 36 .............................. ACAGTGACACAAACAGAATAAAACTAAGGAAAAGGG 24382 30 100.0 36 .............................. CTATCTCTTAAAGACTGAGGAGTGATGAATTTGTAG 24448 30 100.0 35 .............................. ATTGTTCCTCTACGCACCATTCTTTGTAAACTGGA 24513 30 100.0 35 .............................. TTCTGTACTAGAAGCATAAGCGTTAACGCCTAAGT 24578 30 100.0 36 .............................. GTGTCTTTTTTACTGTCGTTTATGACTTGATAATCG 24644 30 100.0 36 .............................. TTGTAATGACATTTTATGATAATGATAGGGATAAAT 24710 30 100.0 36 .............................. CAAATTCATTCTGTTGAATTCTTCTTTTTATTCCAA 24776 30 100.0 36 .............................. ATAATTCCAAGTAGTCAACAATGGATTTATGATTGG 24842 30 100.0 36 .............................. ATCCCCAACCTAGGGGATTATAAGGATTATGAAAAA 24908 30 100.0 36 .............................. ATTACAAAAAGTAGCAACGATGATTTGAATATCTAT 24974 30 100.0 36 .............................. TTTTATAATTTCTTTGTTTTGCAAAAGCGACCCCAA 25040 30 100.0 36 .............................. AAATAAGATAAACGACATACAAATTAAATTATAAAA 25106 30 100.0 36 .............................. ATTTCTATCCATGAGTTCAAGTCATAATTGACCTCA 25172 30 100.0 37 .............................. TAAATACATAATACGTGCTAGACTAAGACCTTATTAT 25239 30 100.0 36 .............................. TACAATTGATTCTATACATAATACATATAATCACAT 25305 30 100.0 37 .............................. TTTCTTTTATTAAATATTTATTGTAATGGAACGCACG 25372 30 100.0 36 .............................. AGCAAACTGTTAGAGATAGTCTGAAATCAATGACTA 25438 30 100.0 36 .............................. GATAGTGAATATCTAGTCAAAATTACACACAAAGAT 25504 30 100.0 36 .............................. ACCTTCTTTTATGTACTAAAAAAGGACCTACAATTT 25570 30 100.0 36 .............................. TTATGTATAGTATGGCTTTATATTATGAAATAATTA 25636 30 100.0 36 .............................. TAGTTTGATTGAAATTATCTTGATTTACTGTATTCA 25702 30 100.0 36 .............................. TACATTGAGGTTCTTAGTAAGAAATGTTCTCATTTT 25768 30 100.0 36 .............................. TTAATTTAATAGCTTTTGAAATCTTTACTAAAGGTA 25834 30 100.0 36 .............................. CTATTAGGAACAATAGCAGCTGGACAACCTATATTA 25900 30 100.0 36 .............................. TCTTTTGTTATTGCAGTAGCTTTTACTATTGCCAAG 25966 30 100.0 36 .............................. TTTATATGTGAAATAATATTTATCATCATGGATTAT 26032 30 100.0 37 .............................. AAAGGCAATAGACTAGACTATTGTCTATTTTATTGTC 26099 30 100.0 36 .............................. AATTACATGAGGGCGAAAGAGTGCTAACTAAAGAAG 26165 30 100.0 36 .............................. ACACTAATTTCGAATGATTTTAGTTTTCGCATAATC 26231 30 100.0 36 .............................. AATGAAAAGAAAGGGTAGATTCAGTTTTAGAGAAGA 26297 30 100.0 32 .............................. GTTATGCTTATATATTCTTTTTCATCTAGCTG 26359 30 100.0 36 .............................. GTGAAATAAATCTGGATTCACTTCTTTCATATCTAC 26425 30 100.0 36 .............................. AAGAAACTTGGATGTGATCCTCTGTGCATAAAACTA 26491 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 76 30 100.0 36 TTATTAATAGAACTACAGTAGAATGTAAAT # Left flank : AGAATATATTGGATTTAAAATATGGTGGTGATATAATGTATATAATACTTGTATACGATATTTTGGCAGATGATGCAGGGGCTAGAGTATCAAGAAAAACTTTTAAAACTTGCAAGAAATACTTAACTCATATTCAGAAGTCAGTCTTTGAGGGTAATTTAACTGAATTAAATTACATGAAGCTTAAAACTGAATTAAATGAATATATCAGAAGGGATAAGGATTCGATATTAGTATTTAGAAGTAGAGATGAAAAGTGGTTAGAAAAGGAGTACTTAGGTATTGTTGATGATAAAACATCTAATTTTTTTTAGAATATATATTGTCTACCTATAATAGTGTAAATACTATAGGGGATTGACAAACAGCAATAAAGCAATGCTTTTAACATAATTCTTTAGAATAATAAGTAGGAAAAGAAACTAATTTCATAAATAAATTTCTAGGTTGACAAAAAGTACGTATGTAACCTAGTAAAATTGGCACGTTAAAAGGCACGC # Right flank : TCTTCTAATAGGTGTATTTGTCAACCCAAAACTGTACCATAATTTAATCGAAAACTAGGCCACTTGGAATAAAAAATTAATTGGTCTTTTCCAACCACTCTCTAGTTTCTTTTATTCTATAAGAATTTCCATTCATATTAATTACATAAGATTTATGAGTCAATCTATCTATTAGAGCAGCTGTTAGCACTGCATCATTAAATATTTCATTCCATCTATCAAAGGATAGATTTGTTGTAATTATCGTGGATTTTCTCTCTGCCCTAAGGGAGAGAAATGTAAACAATAACTCACTCCCTTCTTTATCAAATGAAATATATCCTAATTCATCTGCGATTATTAAGTCATATTTTTCAAATCTTTTTTCAAATGTATATAGTTTTTTATCACTCCTAGATTCTTTTAATTCATTTATTAATGAGGCTATAGTTGTAAAATACACTTTATATCCCATATTGCAAGCATCTATACCTAGTCCTATAGACATATGTGTCTTACCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTATTAATAGAACTACAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 29071-29810 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNQ01000004.1 Tissierella pigra strain WCA3-693-APC-4 seq4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 29071 30 100.0 36 .............................. CCATACCACTATTGCTCATTTTCCCTTTTACTTCTT 29137 30 100.0 21 .............................. CTGTTCCCGTTTCCACTGTTC Deletion [29188] 29188 30 100.0 36 .............................. ACTGAAAGCTTGAAGAAATCAGACTCTAAATATACA 29254 30 100.0 36 .............................. CCTAATAGGAAGTATTCTATATTGAGGAATAAATAT 29320 30 100.0 35 .............................. ACTAAAAAATATGAACATTTATTTAAAGTTACTAA 29385 30 100.0 36 .............................. TATGTTTTTAGTTCTAAACATGTTATATTTATCATT 29451 30 100.0 36 .............................. TTGATATTGTTAGGTATACTCATAAACTTCTATTTA 29517 30 100.0 35 .............................. TTGTTTGGTCCACACATCCTGCTTTTTACTATTCC 29582 30 96.7 36 ........................A..... ACGCATGATTTATGTCTTTTATTTACTCTCGTTAAT 29648 30 96.7 37 ...........G.................. CAAAGTGGTTCTGTGGTGGAGAACAGTTTCCGAATCG 29715 30 100.0 36 .............................. TCGTTTAGGTCAAGGATTGCCCCCGGCGCAAGTTGT 29781 30 90.0 0 ...............T........A....C | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.6 35 TTATTAATAGAACTACAGTAGAATGTAAAT # Left flank : GATACTCGTGTATATCTACTTTCTTCATCAACTGTTTAGATCTTCCTAGTAGCCTATTCTTTTCATTTTCAGAGATAAGCTTGTCTATTTCCTCCAAAATCTCGTCTGTTAGTTTAATTTTTGTTCTACTGCTCGAATCATATTTTGGCTTTGAGGCCATTTCTTCTATTAGTAGCAATATTTGACTTTTATTATTATCTTTATCTTTTTCTAATTCTTCTAAAGTTTCATATTTAGATTCAAAATCGTTAATATATTTAGCTACTGTAGTTCTTGAAATTTTAAGTTCTCTACTAATTGCTCTTTGTGATTTATTTTCTCTGAAATATCTCATTAATATTTCAGCTTTCTGATCCAACTTTATCATCCTCCATCTCCCCTTTAAAAAAACATCTTTAAAAGGTATTTTATTTTAAAGGTGGACCAGTTTTCAATTAAAATGGTGGCCTACTTTTAGGTTACCATAAACAATAGGATTATTAGAGGTATTTAAGAAGGTA # Right flank : CTTCATAAGAATATTGATACAGAATCCAAACTCATATTATCTAATCACTCAAACATAGACAGAACTCACGAACGATTTTCCTCACTTTACCCATGTTCTAATGTTTTTCAATTCTTTATATTATACATAGATATTTATCTTTTAAAAGAGTAAAGGCTAGACCTTAGCTTACCTAAGCCCTTGACTTCAGCTAACTTCTCCTTTTCATATATTTTGTCTCAGATATCAAAAGCTATGGTATCCTATATAATTACTTATACTTTACTTTTCTAAAATTTATTCTACTCACATCATTATCTTAAAGTTACTTAAATCCCCGATCAATCTCCTATCTATCTGAAATATTAATTCGTATAAAAATCCTAACAAATCAATAGAAACTTATGAAAGCTTACTTAATGGCAATAATTTATCAAAAATATTAAGTTCCTCTATAACGTCATCTTGATTATAAGAAAAAACTATTTGTGTTAGAGAATAATGTTCTATATTATATATTT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTATTAATAGAACTACAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //