Array 1 211324-209861 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBAA01000002.1 Legionella pneumophila strain FS_10_1101a-3 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 211323 36 100.0 36 .................................... TATTCTGGTGTTGGTTCTGCTGTTAATTCTGCTATT 211251 36 100.0 35 .................................... TCTGATAACTTACAGTTTTCGCAAATGTCCGTTGT 211180 36 100.0 34 .................................... ACATAAGTGTCTTTTTGTTTCATCTTTCTAACTC 211110 36 100.0 37 .................................... TTTTCAAGAGTAGATATTTCTGTATCAGCTTGTACAG 211037 36 100.0 36 .................................... ATAACTGGCACATATAGTCCAAGAACAGACACTAAC 210965 36 100.0 35 .................................... ATTAAATTAATTTACCACCTTCTTTAAAAAACTTT 210894 36 100.0 34 .................................... CATTTGTTTTTGTACCAAAAATCAATTTGATTTT 210824 36 100.0 34 .................................... ATCTCATATCCAGCCTCTAAATTTTTTAGTAAAA 210754 36 100.0 34 .................................... CAAGTAAATAACCTCTAAGGTTAATTTTGTATAT 210684 36 100.0 36 .................................... AGAATTAAGCACAAAGTATATAAATTATAAAGACAA 210612 36 100.0 35 .................................... ATCCCGAAAATCAAAATTTAGCATTTCCACGCACA 210541 36 100.0 36 .................................... TCGAAAGAAATGATTCGAAGCGCAGCGAATGGGGTC 210469 36 100.0 35 .................................... TTCAAGAGGTATGGGACATCTACATTGCACCAACA 210398 36 100.0 37 .................................... TTTATCCAAGCCAATTCACTCATATCATACAGCCAAT 210325 36 100.0 35 .................................... CTATTGGAAAATGTTATAAACGATGTTATATCTGC 210254 36 100.0 36 .................................... AAACTTCTAGCTATCATAGCGAATTCTTTAATACCC 210182 36 100.0 35 .................................... TGTTGTACAGCTTTATTAAGATATCCGGCAGCAGC 210111 36 100.0 36 .................................... TTCGCATTGGTTGTGCCTATGATTGTTGGCAATGTC 210039 36 100.0 36 .................................... CGGTTCCACCCGATGTTTTAGCTAAAGCTGTTGCTC 209967 36 100.0 35 .................................... CTGTCGGCATAACTCTGTATATCTCTGTGTAGGCC 209896 36 86.1 0 ......................TT...T.A.....T | ========== ====== ====== ====== ==================================== ===================================== ================== 21 36 99.3 35 CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGCTAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //