Array 1 162917-160835 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFMJ010000011.1 Streptococcus salivarius isolate Streptococcus_salivarius_BgEED36, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 162916 36 100.0 30 .................................... ACCTTCAAGACCTTTAGTGCTGATATACTT 162850 36 100.0 30 .................................... GTTTCATTGTGCCTTATAAGAGCTTATAAC 162784 36 100.0 30 .................................... TATGCTTATTGTGGTGTGTCTGAAAATGTG 162718 36 100.0 30 .................................... AGATACGTGGGACAACGTGAAAAAAGGCTT 162652 36 100.0 30 .................................... GCTGAGTGGTCGATACCAGTCCACTTAACA 162586 36 100.0 30 .................................... AGGGTATTGCACTTGACAAATCAGCCCGTC 162520 36 100.0 30 .................................... CCATTGACCCACCGAACTATTTGGGCACAG 162454 36 100.0 30 .................................... ATGCCTTCACCCATTGATTAAATATCTCAA 162388 36 100.0 30 .................................... TTTTAAAGGCATCTTCCAAGGACTAGGCAC 162322 36 100.0 30 .................................... GACAAAGCAAAAGACGCTGGTGCTGACCCG 162256 36 100.0 30 .................................... ATCATCAGACATCCAAAAGGCAACTATCAA 162190 36 100.0 30 .................................... CTTGCTGTCTTAGAAACAGCTTTAGCTGTA 162124 36 100.0 30 .................................... ATCTGATAATTTTCAGTTTATTTCACGAAC 162058 36 100.0 30 .................................... TATTGTATCCTTTGTATGTATCCATAATGA 161992 36 100.0 30 .................................... TACTCTAGGTGATTTATTAGTGATTTTAAC 161926 36 100.0 30 .................................... CGATTGTAGAAATATAATTAAGTACGCTTA 161860 36 100.0 30 .................................... CTGACGAGGGACGCGAACAGATTGACGAGT 161794 36 100.0 30 .................................... CAGCACAAACGCAACGACTCTCAGCATGTC 161728 36 100.0 30 .................................... CTTTGAGGTGGTGGACTTTTGGCGAGAGCC 161662 36 100.0 30 .................................... AGCACCAGTCGTTGAAATTCCTGAGTGGCA 161596 36 100.0 30 .................................... ACCCTCACTATATTGGGTCCTTGTAAACTG 161530 36 100.0 30 .................................... ACGAGCTCTAACATCCTCTTGTGTCTCTTG 161464 36 100.0 30 .................................... CGTTTTACACAAAATACCTACCTCTACGTG 161398 36 100.0 30 .................................... CCGAGTGATAGACACGACCAATATTACGAT 161332 36 100.0 30 .................................... TGTTCCAAAATACGTAGATAAAGATATTAA 161266 36 100.0 30 .................................... TAATAATTTTGTTTTATAGAGCAATAGAAA 161200 36 100.0 30 .................................... ACGTAAATTTAGTTAAAACACTCGAACAAG 161134 36 100.0 30 .................................... GATTGTGTATAATCGTTATATACGAAACTA 161068 36 100.0 30 .................................... ATCACGCCACCAGTATAGACGCTTTAGATT 161002 36 100.0 30 .................................... ACAGCCTTATAGAAGGTATCTAAGGGCTAA 160936 36 100.0 30 .................................... TGAACTAATTAAGACGATTGGAGAACACAA 160870 36 80.6 0 ............CC...............T..CTCT | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.4 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AAGAGAATTTTGGTGTTCGTCAATAGTTTGTCGTATTTTTCTAATGATGAAATTTATCAAATCTTGGAATATACAAAGTTATTACAAGCTGATGTATTATTTTTGGAACCTAGAAAGATTAAAGGTATTCAACAATTTATTTTGGATAAGGATTACATTTTGATGCCTTACAATAACTAGTAATTTGGTAATAAGTATAGATAGTCTTGAGTTATTTCAAGACTATCTTTTAGTATTTAGTAGTTTCTACATGAAGTTGAGTGGAAGAATCATTTTGTTAGAGAGTAGGTTATAAGCTATCTGATAGGTGAGAAGGTAAGTTGATTGGAAAAAGATTTCTAAAATTTTTTCGATATAGCGACAGCTCTATTTGTTAAAACGTTGTTATATAAGGCTTTTTAAGGTATAATAAACATAAAAATGGAATCATTTTGAAGCTGAAGTCAGGCTGAGATGAATAGCGCGATTACGAAATCTGGTAGAGAAAAATGACCTACGAG # Right flank : CTCTTTGTAACGATTTTTGGTTGACTTATCCTTAAACTCATCCTATCATAGAGGGGTCTAGTATTGAAATGGGGGAAGAGACATGTTATACGAATATCCAGCGATTTTTCACACGATTGAGGAAGGTTATCAAATTAGTTTTCCTGACTTTGGTCGTAGCATTAGGGCAGATTCTTTGCCTCTTGCCATGACGAAAGCATCTGTGTTTTTATCACATATTATTAAAGGGTATGAAGATAAGCCTTTACCTGAGCCGACTGCGGTTAGCAGTATTCCTAATGAGGAAGAACTCGTCGTGTTGATTCAAACAGAGCTTGATTAAGACTAAAAAACTCTCGGAAGATTAATTCCCGAGAGTTTTAGGTTTTATTGGCTACATAGACGCCCAGGACGACTAAAATGCCTGCAAAAATTTGTAGCTGCGAGAAGGGTTCTCCTAAGACGACAACAGCAGCTAGAATTGAGATAATGGTCGAAATTCCAATAAAGGATGCTGTTCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //