Array 1 27160-25738 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAFG01000019.1 Neisseria meningitidis strain Neisseria meningitidis isolate 21583, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27159 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 27093 36 97.2 30 ............A....................... AATCAGACCGACTTTACAACGAAGGTTTGA 27027 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 26961 36 100.0 30 .................................... AAGCAAATCATTTTCATAGTCAGCAGCTTC 26895 36 97.2 30 ......................T............. ACGTGAGTTTGTCTATGAGTTCGACGGCGT 26829 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 26763 36 97.2 30 .......................T............ CCGACCGTGGGAACGACGGTATAGTGGATT 26697 36 100.0 30 .................................... TAAAAAGATACTCATTCTGCCTCCGTATTA 26631 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 26565 36 100.0 30 .................................... TAACGATTGAAAATGAGTACGCATTAAGTA 26499 36 100.0 30 .................................... GAACACTTGAGCAATTTAATACGCGAACAA 26433 36 100.0 30 .................................... TGATTCTCGCCTATATGAAACGGAACAGTT 26367 36 100.0 30 .................................... TCTATCTTAATTTCTCTTTGTTCTTCTTTA 26301 36 100.0 30 .................................... CATTGCGCCCATTTTGTCTATCCGAACAAT 26235 36 100.0 30 .................................... ACCACCGCCGCTTATATAGAAAAGCTGTAA 26169 36 100.0 30 .................................... AAAAAAGTTGCGGGATAAGTTACAGTTTGA 26103 36 100.0 30 .................................... TAATTGATTTTTAAGGTTAATCAGTTTTTG 26037 36 100.0 30 .................................... CTATTTTCCTGCACCTACAACCCCCGAACG 25971 36 100.0 30 .................................... CTTTCTGTGCGATGTATTGAAAAAGCTGAG 25905 36 100.0 30 .................................... ATGCTGGATACGGCATTGATGCTGCAACTT 25839 36 100.0 30 .................................... TTGCAATCCAAGGCTTCAAAATGGCTTGGA 25773 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.4 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAGCGGTTGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCTGGAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //