Array 1 212256-213017 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QJJR01000004.1 Streptohalobacillus salinus strain DSM 22440 Ga0244547_104, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    212256	    36	 100.0	    30	....................................	TTGTTTTTTTGATGATTGAAATACTGTTAT	
    212322	    36	 100.0	    30	....................................	TCAAGACCGGTGATTCGCTATCCTTCACAC	
    212388	    36	 100.0	    30	....................................	CGGTCACCGATAACAATGATTTCATCACAC	
    212454	    36	 100.0	    30	....................................	GGGCGATTTAATGTATACCGTTTACTGTGA	
    212520	    36	 100.0	    30	....................................	GATCAAACAGGTATATCAGTTAACTTGGGC	
    212586	    36	 100.0	    30	....................................	AGTAATCTTTGTAGCGATGCTGTCATTCTC	
    212652	    36	 100.0	    30	....................................	CGCATTTGGGCGTTAGTCGTAATAAAGTGA	
    212718	    36	 100.0	    30	....................................	TGTCAAAGCAATCGCTTGTACTTCCTGTTT	
    212784	    36	 100.0	    30	....................................	GATAACATGAAAACGTCGTGTGAACACTGG	
    212850	    36	 100.0	    30	....................................	TTGCTGATTCAGGAACAGGGGAAGTTCATT	
    212916	    36	 100.0	    30	....................................	TTTGGATGATGTTGAAATCACACAATACGC	
    212982	    36	  97.2	     0	...................................T	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  99.8	    30	GTTTTAGAGCCATGCTGAATTGAATGATTCCAAAAC	                              	       

# Left flank :   GTCAAAACTGAATTAGAGAAGCTGATGATGTCCATTAATGACATCATCAGTGATCAATTACTAGAGCATGACTTAGATATTCAAACAACGGAGATTACTTTTCCAGCATTATTCAAAGCCTTAAATATAAAAATCAATAATCAAGCGGTATCTGTTAATGACAAGATCGCAGATATCATCCAGCTATTTAAATATCAATCAAGAAAAAAGCTATTGATCTTTGTTAATGTATGTTCATACCTAACAAAAGTACAAATAGAGGAAACGCGCAGCTATCTATCGCTAAATAGTGTTACGGCATTGTTTATTGAGCCAAGAACAATTCAAGAACTTTATCAATATATTTTAGATGAAGATTATTATCTCAGCTATGAAAAAGTGTTATAATTATAAGAAATGGTCCTTGAAAATTAAACATTAAATCATAAATCATTCAATTCTGAAGCTTTGCTATGGGTGAATGGCGCGATTACGAAACCTTAACTTTTTTACCTGCGAGG
# Right flank :  TTAATAATAGTTTTAAAAAGGGAAGGGAAGCAGTATGCGAATAATTATCTCACCTGCAAAGAAGATGAAGGTAGATACCGATGCATTTACATATGAACAATATCCACAGTTTTTAGATCAAACGAAAGAACTGTTAACGTATTTACAGACACTAAGTTATGAAGAGTTAAAAAAGATTTGGAAAGCAAGTGACAAAATATCGACAGAAAATTATGAACGGATTCAAGGTATGGATCTAGAATCTAATTTAACACCGGCAATTTTATCGTATGAAGGTATTCAATATCAACATATGGGACCGGATGTATTTGAACAGCAACAATTTGATTACTTACAAGAGCATTTAAGGATCCTGTCAGGTTTTTACGGTATCTTAAGACCCTTTGATGGGGTGACGCCATATCGCCTTGAAATGCAAGCAAAACTACATGACGATACATATAAATCAGTTTATCATTTTTGGTCCGATCAATTAGCAAAGCAATTGCTTAGTGAGACGA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCCATGCTGAATTGAATGATTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.00,-0.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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