Array 1 65349-61410 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGYA010000007.1 Acinetobacter baumannii strain ATCC 19606 NODE_7_length_255792_cov_39.857982, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 65348 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 65288 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 65228 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 65168 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 65108 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 65048 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 64988 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 64928 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 64868 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [64817] 64816 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 64756 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 64696 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 64636 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 64576 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 64516 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 64456 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 64396 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 64336 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 64276 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 64216 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 64156 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 64096 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 64036 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 63976 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 63916 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 63856 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 63796 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 63736 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 63676 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 63616 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 63556 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 63496 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 63436 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 63376 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 63316 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 63256 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 63196 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 63136 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 63076 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 63016 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 62956 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 62896 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 62836 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 62776 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 62716 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 62656 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 62596 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 62537 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 62477 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 62417 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 62357 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 62297 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 62237 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 62177 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 62117 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 62057 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 61997 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 61937 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 61877 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 61798 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [61772] 61738 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 61678 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 61618 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 61558 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 61498 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 61438 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTAA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [50-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //