Array 1 6445-4117 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKEO010000028.1 Slackia sp. ZJ350 Scaffold27_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =========================================================== ================== 6444 23 100.0 52 ....................... ACTTTAGCCTGCGCCTCCACACGAGCAACTTGCTTCATTGGCTAGAAGCCCA 6369 23 100.0 51 ....................... CACAGCAAACGAGACCAACATAATATTCCTTCCTTCTTGGCTAGAAGCCCA 6295 23 100.0 57 ....................... TCTTGTACATGAAAACCCTTCTTTCTTCGTCTGATCGGATGATGGGCTAGAAGCCCA 6215 23 100.0 59 ....................... ATGCCGAGGATGATGCGAAGCTTCATGAGCTTCTGTTTCTCAAAGAGGCTAGAAGCCCA 6133 23 100.0 53 ....................... CATGATGGAAGCGACGAAGCAACGGATGAAAGGAGAACCGGGCTAGAAGCCCA 6057 23 100.0 56 ....................... AAGAAGTCGACGTCTTCTCCATAGGAATCAAGGCCGCAATCATGGCTAGAAGCCCA 5978 23 100.0 55 ....................... TATAAGGGCGCATGCGCTCATCAAGCTGGGCGTCGATACCAGGGCTAGAAGCCCA 5900 23 100.0 56 ....................... AGCAAAAATAAGCCACGGTTTTGCCGTCAGCGTGTTGCGCAAGGGCTAGAAGCCCA 5821 23 100.0 53 ....................... GAGTTCCTGCAACGCGCAGGAAAGACCGACGAAGACGAAGGGCTAGAAGCCCA 5745 23 100.0 54 ....................... ACTTGTCGTGGCGACAAATAGCGTAGCGAATTCCATCGCTGGGCTAGAAGCCCA 5668 23 100.0 55 ....................... CCTCCGAAGCTTGGCAGTATCACCAAACCTCTCGTCCCACTTGGCTAGAAGCCCA 5590 23 100.0 54 ....................... AGAATGAACGTAAATCTTATACATGATTTTCTCCTTTTCCGGGCTAGAAGCCCA 5513 23 100.0 52 ....................... AGATCCTCGAGGATCTCTTTGAACTCTTCGAGCCTACCCGGCTAGAAGCCCA 5438 23 100.0 46 ....................... ATGGAAAATGGGAAAAGAATACATTTCCGCAAGGGCTAGAAGCCCA 5369 23 100.0 54 ....................... AAATTCCGCAACCAAAGAAGAGTCAGAAACGACCACGCCTTGGCTAGAAGCCCA 5292 23 100.0 57 ....................... TCTGTTCGAGCAGGACGTCTGCCCGCTCGATGATCTCTACGAGAGGCTAGAAGCCCA 5212 23 100.0 56 ....................... AACCGCAAAAACAGCCGCGAATGAGACCAACATGGCTAATCCCGGCTAGAAGCCCA 5133 23 100.0 55 ....................... TCTGCAACTCTGCACGCAGATCTTTCAGCTCTGCGATGGCTGGGCTAGAAGCCCA 5055 23 100.0 57 ....................... TTGCGAGAGTGTGAATATAAATCTTATAAGACGAAGAAAGGAGAGGCTAGAAGCCCA 4975 23 100.0 53 ....................... TGTCGCACACCTCGGAGTACTTGTCGTTGAGCAGGTAATTGGCTAGAAGCCCA 4899 23 100.0 53 ....................... AACATGTCCAGAGCCTGTTCGACTCTGGCTGCTTCCGAGAGGCTAGAAGCCCA 4823 23 100.0 53 ....................... CGGGCAGCAATTCGCCCATGACGGATTCGATATCCTGCATGGCTAGAAGCCCA 4747 23 100.0 57 ....................... GATGCCTCGGGATGGGTGAGGGTTGCAAGGGAGCACATGCACCCGGCTAGAAGCCCA 4667 23 100.0 53 ....................... CGTTTCCAGGCGCTACGAGGACGATAAGACTCCAACGCGGGGCTAGAAGCCCA 4591 23 100.0 53 ....................... TCGGACTTGTCGATACGCTCTTCGTCGAAATCCTCGTGGAGGCTAGAAGCCCA 4515 23 100.0 51 ....................... AGGTCGGCCTCCAGTTGTTTGATTTCCTCCTGCACCTCGGCTAGAAGCCCA 4441 23 100.0 53 ....................... ACCCTGGTCTCCAGCGGCATTATCTGCGCTGAAACGATCGGGCTAGAAGCCCA 4365 23 100.0 53 ....................... AGGCATCGAGCCTGTCGTAGCATGCACGCTCGCCTGCAACGGCTAGAAGCCCA 4289 23 100.0 52 ....................... CAGGTCGGCGACCGCCATCCTGATCCTTTCCTGCCCCTCGGCTAGAAGCCCA 4214 23 100.0 52 ....................... TCGCATTCGGAATACCTTGATCGAACAAGAGTCTTGCAAGGCTAGAAGCCCA 4139 23 82.6 0 .................A.C.GT | ========== ====== ====== ====== ======================= =========================================================== ================== 31 23 99.4 54 AATCCCCGAGAGGGGACGGAAAC # Left flank : CCGTTCATTTGGACATCGGGGCAATAATGGGCGACCGCTTAACGAAGACCGAATTTGCCCCAGGAAGGATAACGGGCGCCTCTCCGTCAGAGAACAGGTATTATGTGCTTATACTCTTCGACATATCGAACCAGAAGAAGTATCGGGCGTTAGTGAAAATACTCAAAAGGTATGGACTGAGGATACAGAAGTCTGTGTTTGAAGCCCAATTGAAGACCTCTCAAATAAGGGACCTTGTCCTGTCGATTGAGTCGCTCATGGGATCGGAACGCTTTTATGATCCAAACGACAATGTCAGAGTGTACAAGATTGCGGGCAATTGCAACGTTGTTGCCTTTGGTCCATGTAAAGCCAGCATTTTGGAAGAGAATATATTCTTCTGATGCGTGATGGTGGAACAATTGGGGGTGTAAGAGAAAGCAATTGTTATAATGTGTTTGGTTTTTCCACCTGGGGCGTAGCACATTGCAGCTACGATGTCCATAGAGGCTAGAAGCCCA # Right flank : TTTACTCGAACGATTTGGGGCGGAAAGCTGCCTGGTCTTCAACAAGGTTTTGAGAGCTCGTGCGACGTTGCAAAAACCTGCGGTCTGTCAACAGGAGAAAGGCACCTTGCGCTTCTTGTTTGCTCGTTTTAGTGTGTTGACGCGCAGAAAGAATGCTGAAACCAAACAGAGAGGAGCGGACGTGGCAGAAGGTGTCATCACGCCTGGAACTGGCGGAAACGTGTACATCCCCTACGACGAGCGCAGCGGCGGCGAATCGGTCGTCTACTTCACGCGCAAACTGAGCCCCGAGGGGCTGCTGAAGGCCTACGACGAGGTGTCGGGTGCGCTTGCGGGCAAAGTGGCCGTGAAGCTGCACACCGGCGAGCCGCACGGCCCCAACATCATCCCGCGCCCCTGGGCCAAGGAGCTCATGCAAAAACGCCTGGACGCCGGCACCATCGTGGAAACGAACACGTACTACGAAGGCGGTCGCCACAACACGGAGGTGCACAAAAAGA # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.61, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,12] Score: 0.37/0.37 # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 23697-17980 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKEO010000021.1 Slackia sp. ZJ350 Scaffold20_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================================================================== ================== 23696 33 100.0 33 ................................. CGGCAGAGGGCAACGTGGTCGGCGACGTGTGGA 23630 33 100.0 33 ................................. CAGGGATGGCATACCATGCCGGACGGCGCGGGG 23564 33 100.0 34 ................................. CCAACATGGTTTTGATCATGTCCAGAAACGTGCT 23497 33 100.0 34 ................................. CCAAGCGCCCGGTAGCGCGGGTCGTCGGCCGCAG 23430 33 100.0 34 ................................. AAAACCGACGAAACGGTGTTCGGCGGCGGGCGCT 23363 33 100.0 33 ................................. CCTCGGCGTGGGGCGTGTACGTGCAGGGCAAAA 23297 33 100.0 35 ................................. CGTTCGAGAACTTCACCCAGTACGCCGATTTGGTT 23229 33 100.0 34 ................................. GTTTGCAATTTGATCAAACGAAACCATGAATTGA 23162 33 100.0 34 ................................. GATAAGCGCCAAATTCGACGTTGCGGTTACGTTG 23095 33 100.0 33 ................................. ATTTCCGCAGACAAGTACGGAAATGGAACAAAT 23029 33 100.0 33 ................................. GAATTGGAATAGCCGTTGTTTATACGATTCGGC 22963 33 100.0 36 ................................. CGCGAGCCTTTTGCAGGGCTTGGGCGGCAACACGGC 22894 33 100.0 33 ................................. GATTTTTTCGACGCTCGCGAGCCTTTGCACACC 22828 33 100.0 33 ................................. AGATATTTTCTCGGGTGAACGGCGTATTTGAAG 22762 33 100.0 33 ................................. CCAAACGTCTAGGCCATAGCGACGTGGCTACCA 22696 33 100.0 33 ................................. TCCGCAATCGCGTGGACGTCTCGGGCGTCGAAA 22630 33 100.0 32 ................................. TTCCAAAACCGCCCGTATCGTCTCGTCTCCGC 22565 33 100.0 33 ................................. TCCAACCGCTCAAAACCTGGCAAACCGCGCCGT 22499 33 100.0 34 ................................. CAGTGCTTCCCAGTCAAGCGGGATTTCGTTGGTC 22432 33 100.0 35 ................................. TGAAGTGGCTCTAACGTTGTAATCCTTTACGTACT 22364 33 100.0 34 ................................. GGAAAGCAGTGGCGGAGCAGGGCTACGGATTTGG 22297 33 100.0 34 ................................. TGTTAGGTCGCACAAGAACCCGCACGACGAGCAA 22230 33 100.0 33 ................................. GCCTTCTCCCTCCGTCTCGTGGACGAGATGCGA 22164 33 100.0 33 ................................. TCATCATGACGCGCGACAACAGCCAGCAGGCGC 22098 33 100.0 33 ................................. TCGACGTGGCCGTCGACCTCGTCGAGAAGGCCC 22032 33 100.0 36 ................................. GACGCCGTCGCCGTCGACGTCGGAGGCCGCATGGCT 21963 33 100.0 33 ................................. TGCACGGCCGAAGAGTACGAGGCCCGCTTCGGC 21897 33 100.0 32 ................................. CCAACGCCCTCGTGCACGGCTGCATGTTCGCG 21832 33 100.0 33 ................................. CGGCCACGGTCGACCCGTAGCCCTTCATCCTCG 21766 33 100.0 32 ................................. TCCGTACCAGTCGAGCGGGCGTACGTCTCCAC 21701 33 100.0 34 ................................. ATCGAGATCGGGTATTTCGCAGACGATCAGGACT 21634 33 100.0 33 ................................. CTGATCCTTCCGGCCCGGGCGAGGTTGCACAGG 21568 33 100.0 33 ................................. TGCAAGCCGGACGGATCGTACGAGACGCCCGAA 21502 33 100.0 33 ................................. GCGTCCTGAGCTAGCAAGCGGTCATCGCAATAG 21436 33 100.0 34 ................................. AAGGTTTTGGCCTTGCAGATCGCATCGTCGTACA 21369 33 100.0 34 ................................. AAGGTTTTGGCCTTGCAGATCGCATCGTCGTACA 21302 33 100.0 34 ................................. AAGGTTGTTTGTCATCGTCGATGCCATATTGCTT 21235 33 100.0 33 ................................. GAAGTACGGCGAGAACAAGAAGGGTTACAACAC 21169 33 100.0 35 ................................. GGTGCCTTCTCGGGGCGGCCTGGGCGACGCTCGAA 21101 33 100.0 33 ................................. TCATGCACCCCAAAATCGTCCAGTCTTTTTCGT 21035 33 100.0 33 ................................. ACGACGTTCGACCTGCTCAAGGGCGGAAAAGGC 20969 33 100.0 33 ................................. CGCCTCGCCCGTCGGGCAGCCCCCACCGCTCAA 20903 33 100.0 32 ................................. ACGGAAATTGCTGACGCTATCAGAAGCGTTAA 20838 33 100.0 33 ................................. AAGATTCGCGAAAAAGGCGAACTGACGTTGGAC 20772 33 100.0 32 ................................. GCAGTACCGGAAGAGATTTACCAAAGATACCC 20707 33 100.0 33 ................................. GGGAAGGGCGGGGCCATGAAGACGGGCAGCGTG 20641 33 100.0 35 ................................. GCTGTAATCCCAGGTCAGTTGCGCCAGTTTCGCCA 20573 33 100.0 33 ................................. TGCGTCATGCTGGCGTCGCGCGGGCCGGTCTAC 20507 33 100.0 34 ................................. CATAGACGGCTTCGACGTTTTTATAGCCGTTGAG 20440 33 100.0 34 ................................. GAGACAGGCAACCGGCTTAACCTGGTGGTTTGCC 20373 33 100.0 33 ................................. GTAGCCCCGGCCCAGGTGACCACGTTGCGCCTT 20307 33 100.0 35 ................................. CTTTCTTTTTCGTTGTCGTTGTTACTTGTTAGACG 20239 33 100.0 34 ................................. CGCTCGCTGGTGTCATCGTCCCTGATGAAACGCT 20172 33 100.0 36 ................................. GAAAGCTTGCTCGAAAGGTCAGAGTCGTCTGCGGCG 20103 33 100.0 33 ................................. TCGGCCATGGCCGCAAGCTTCGGCCTGTCCGCC 20037 33 100.0 15 ................................. TCGTCCGGGTCTGCC Deletion [19990] 19989 32 81.8 34 .CG..G.A....-T................... AGGGCCGTCTGCAGGTAAGGGGAAAGCCGGCCCC 19923 33 100.0 34 ................................. AAAACCGACGAAACCGTGTTCGGCGGCGGGCGTT 19856 33 100.0 33 ................................. CGAACGCGAGGAACGTCACATACGAGTGTTCGA 19790 33 100.0 33 ................................. GACCTTGACGCCGAGGGACTCGCCCGTTCGCGT 19724 33 100.0 33 ................................. GCCTACGCGTACGACCGGCCCATAGAGGGCCAG 19658 33 100.0 78 ................................. AAATCACGGAGAAGGGACGCGAAGGCTGGAGCGTGGGTTGAAACGACTCCTACCGACAGACGATGGCCGACAACGTCG 19547 33 100.0 34 ................................. CTTGACATGTACATCCGCACCGTCCTTTCGGAAG 19480 33 100.0 34 ................................. AACGGCACGTACCGGGAGGCGTGCCGGAGGCTGG 19413 33 100.0 32 ................................. ACGATTTGGCTGCTCTACCTCGTCGAGTTCGC 19348 33 100.0 32 ................................. ACGATTTGGCTGCTCTACCTCGTCGAGTTCGC 19283 33 100.0 33 ................................. ATCGAGATCGGGTATTTCGCAGACGATCAGGAC 19217 33 100.0 33 ................................. GCCTCGTTTGTTTCGCAAGCGGATCGATTAGTT 19151 33 100.0 33 ................................. AGGGTCGACGCCGGCGAGCACGAGCAGGCGGTC 19085 33 100.0 35 ................................. TCTTATGGTGGAGCCTAGTATACGCAGCTCGAACG 19017 33 100.0 33 ................................. TGCTAGGTCGCACAAAAACCCGCACGACGAGCA 18951 33 100.0 33 ................................. TGCTAGGTCGCACAAAAACCCGCACGACGAGCA 18885 33 100.0 34 ................................. TGCTCTTGTCCATTGAGTCAATTACCAGCATCCC 18818 33 100.0 35 ................................. TGGTCCAGCTTCGCCGCCGGCAAGCAGGTTGTTTC 18750 33 100.0 33 ................................. CAGATGGTCGATGTTGCCGCGCTCACGGCTGAC 18684 33 100.0 35 ................................. AATGCCGTAAAGAATTTCATCACTACGACGTGGAA 18616 33 100.0 34 ................................. GCTAAAATCAATCGGAACATAACGTTGCGATTGC 18549 33 100.0 33 ................................. ACAATAACCCCAGGTCAAACCCCATTTTTTCGG 18483 33 100.0 33 ................................. GATCCTGAATTAGTCCGCAAGACTGAAGACGAA 18417 33 100.0 33 ................................. AAGAACTGCGCCGCGAACGCCAATGCGGCGGGG 18351 33 100.0 33 ................................. GGTCGAGCAGGGGCGGGCTTTCGGATGCCTGCT 18285 33 100.0 35 ................................. CGACTGATGCCGATTTGCAAAACCAAGGATGCAAC 18217 33 100.0 37 ................................. GAAGAGTTCGCTGACGTCAACGTTGCGGCGGACGCGG 18147 33 100.0 34 ................................. TCCTTCGGCATGGCGTACTTCAGCCGGAACTCGT 18080 33 97.0 34 .........................A....... GACGCATCGAGTGTCACGGACATGTCGTGCATGG 18013 33 72.7 0 .C..G...G.....T....AT.C..A.C..... | A [18008] ========== ====== ====== ====== ================================= ============================================================================== ================== 86 33 99.4 34 GTCGCTCCCCGCAAGGGGAGCGTGGGTTGAAAC # Left flank : GTACGATGTGAATACCGAGGATGCCGCCGGTCGGAAGCGCCTGAGGAAAGTCGCAAAGCATTGCGTCAACTACGGTCAACGCGTGCAAAATTCCGTATTCGAATGCGTGGCCGACGCGGCGACGATGACGCACATCAGGGAAGAACTTTTGGGCCTGATAGATCCCGAGAAAGACAGCTTGCGGCTTTATTCGATGGGGAACAATTACCAGGGTAAGATCGAACATATTGGCGCAAAAGCAAGCTATGAGGCCGAGGGATTTATTTCGTTCTGAGGGGGCGTCGGGCTGCACGAGGCCGAGGGGGCTGGCCGGCGCTTTCTTGGAAATTGCGGGCCAGGCTCTGCGAAGGCGAGCGCGAACGGGAGGCGTTCATGATTGCCCTTGTCGGTTCGCACTCGTTTTCTGCGCTTTGAACCTTGACAAAGCGGCTCTTGCGGCAGGTTGTTCTGCTTTAAAGTCTTATATGGTAGGATTATGTGCGCAAGACACAAGGTCTTGC # Right flank : GAAGGCATCTGTGTGCACTGGGCGCACACAAGCGTCTTTCCTGCGGAAAGACGTGGGTTGAAGTGGCTTTGGCTGCGTTTGCGCTTCGGGGAAACGATGGAGAAATCGCTATGGAAATCCTTGTGGATCTGTTTGGTTCTGGCGCTCCGAACTGCAATGAGTTTTACTCGTTTTCAGGCTCTTCTCCGGTTCGGCTTGTCGTCCCTGCCTGCCGCCCCCCGCTGCCCTTCGACCTCTTCTGCTCCCCCTGCTGTTCTAGCGGCGCCGCCGCGTCCCTCGCCGCCGAGTGGGTTGGGACGGCCTTTTCCTTCCGCAGACGGCGGCGGCCGGGCAAGTTGCGCTACCATAGCCCTACGAACTGCGAAGACGGAGGACTCATGGCGAAGAAACTGCTGATGGGAAACGAGGCGTTTGCGCATGCGGCGCTTGAGGCCGGCGTGCGCGTGGTGGCGGGCTACCCCGGAACGCCCTCTTCGGAACTGGTGGAGACGGTTGCCGCC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCAAGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.10,-9.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 71389-70779 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKEO010000015.1 Slackia sp. ZJ350 Scaffold14_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================================================================================ ================== 71388 36 100.0 29 .................................... TCTTCGGTTTTAACGAGGCGCTCGTATTG 71323 36 100.0 29 .................................... TCTTCGGTTTTAACGAGGCGCTCGTATTG 71258 36 100.0 30 .................................... AGGCGTTAATAGATACACCTATCGTTCGTG 71192 36 100.0 30 .................................... GCCAACTATCTCCGCTATACCGACGCGACA 71126 36 100.0 30 .................................... CCCGACCGTGACGGTGTGCGGGCTCGGCAA 71060 36 100.0 30 .................................... CATCGTGACCGCCTACCGCATCAGCAAGAC 70994 36 97.2 144 .............................A...... TGCGGAGGCGTGAAAAAAGCGCCTGCGTTGGCGCTTGATTCCCGAAAACATGCTATACTCTGCTTGCGGAGACACCCCCCCGTCTGTCAAAGAAGGGCAATGGGAATCTCCGTTCTTCTGTATGTCTCTATCTCCGTCTCCGAG 70814 36 97.2 0 ..............................C..... | ========== ====== ====== ====== ==================================== ================================================================================================================================================ ================== 8 36 99.3 46 GTTTTGGAGCAGTGACATTCTGACTGGTAGTCAAAC # Left flank : GTTCGCCGGGAAGCTTCAGAGGAAGTTGTGCGATTTGCTTTTAGAGGACGAGGGGTTGCGCAGCGAATTGGAACTGTTGAGCGAGACGGCGCGAAGCAGAATCCATGGACTGAGTTTGCAGCTTGAAGGAAGCCACTCGTTTGCGGTAGAGTGGGATATGGCGAAATACGTGAAGGCGTTTGGTTTTGGCGTTGATGTTTCGCAGGGCAAAACGCTCCTTGACAGTTTGATACTGTTTATCGACTGCATTTCCGATCTTCGGTTCGAGGAAGCCTTGCTGTTCGTGAATTTAAGAGCTTTTTTGTCAACTTTTGAACTTCAAGAGTTCTATGATCGCGTCTTTTATCATGAAATTCCGGTCCTTCTGCTTGATAACGCAGTTTTTGTCCGTGATGATGGATACGAGAATGATCTTGTCGTTGACCAGCACTTTCTTGAATCGGGAAGATCGTGCCGGTTGGAATGTTCGTCCTCTTCGCAGAGAGGAATTTGCTCCAACG # Right flank : GCTTGCAACAAAACGACCCCGGCGCAGTGCCGGAGCCGTAAAACGGGGGTCGTTCGAGTTGTCGGCCTATGGCCGGCCAAGACGGCTTGGGTGGTCAGATCGAGCCGTTGCAGCTGGTCAGGCCGGTAAATGCGGTTCGGGCGGCCTGGATGGACAAGGCGGCGCCCGCACCGGTTCGAGCCGGCTATTCCGTCTCTTTCAAAAACTCCTTCTCGCTTTTGTTGTCTTCGCGGACGGCTTCTTTCACATCGCGCTTGAACTCGCGAAACTCTTCGCGGGCTTCGTGAATGTTCTCCTTGGCGTTCTCAACCAGGTCTTCTTTGATGGCCTTTGCCGTTTCGATGGCGTCCTTGCCCAATTCCTTGCGCTCTTTTTTGTCCTCGCGGTACAGTTCGCGGTCTTGCTTGTCCAGCATGGCGAGCTCCTTTCGTGTGGCGAACATCGATGTGCGCCGGCTCGGTTTTGTGCCGACGGCAACCAGCATAAAAGGTTCCGCGCCC # Questionable array : NO Score: 4.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-1.59, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGAGCAGTGACATTCTGACTGGTAGTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //