Array 1 84248-86214 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUGM01000001.1 Ruminococcus sp. AF19-29 AF19-29.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 84248 36 100.0 37 .................................... GAAATATCAGATTTTTTAACATTAACACCGTAGAACA 84321 36 100.0 34 .................................... TTGTCTCTTGATGTAGCACACGCAACAGTGTGTA 84391 36 100.0 36 .................................... TTTCCGTCATCCGTAACACTTGGATACATATCTATC 84463 36 100.0 38 .................................... GGTTTCCATACTGCTTTCGCGCTGCAAGTCCGCCTGTT 84537 36 100.0 35 .................................... TAATGTTACCCCATGCGACACTACTTGCAGTCGCA 84608 36 100.0 35 .................................... ATCTTTGGCTTCTGGATACAAACGAAAAAATTTTG 84679 36 100.0 32 .................................... TGTGCCTGAAGCATCAAGAATGTTCTATCAAT 84747 36 100.0 35 .................................... CAAAGTATTCTGTAGTATCGCAATTAGGACGCTGA 84818 36 100.0 34 .................................... TAGATATTTTTTTATAAACGATATCGCTACAACT 84888 36 100.0 35 .................................... TGTCCTTTTTTGTCTTTTCCGGAACGTCCAGCATT 84959 36 100.0 34 .................................... CGTAAATCCGGAGTACGTCCATCATGGTATGTTG 85029 36 100.0 38 .................................... TTTGTTGTTCCTCCTGCTCTGAATTTTTGCACTAAAAA 85103 36 100.0 35 .................................... AGGATATTGATATTGTCCTTGGATTCCTCTTCAAG 85174 36 100.0 35 .................................... CAGAATATGGTTAATGAGCAGCTCGGTTGTTCTTT 85245 36 100.0 41 .................................... TGTTCTTTTGTAAAACTATCAACAGTAGGACGCTTTGTACC 85322 36 100.0 34 .................................... CGCAGCACGTCAAGTCTTCTCATTATTAACCTCT 85392 36 100.0 35 .................................... CGGTCCTGTCCTGTCAGTGTGAACATTGGCTCGCC 85463 36 100.0 35 .................................... AGCCATTCCAGACTTTGAGCCGTGACACTCTGTAA 85534 36 100.0 35 .................................... TATGGCGTTGACTTATTTAACGTATTCGCTGTATG 85605 36 100.0 35 .................................... TGATATTTTTGATTATCTGGATTAGGTCTCCCTTC 85676 36 100.0 35 .................................... GGTTCATGTAATCACCTCCTATTCAGTTATCTCTG 85747 36 100.0 35 .................................... AATGTGTCCATCAACAAGCGAACTCTCCCTTCTCT 85818 36 100.0 33 .................................... TGCGGTTGTGGATTTGATAAAATTTGTGATAAC 85887 36 100.0 39 .................................... AGTCACTACACACTAAACGTGTGCCATTGTCTAGTGCCA 85962 36 100.0 34 .................................... GTTCTTTCCACCTTTCTTATATATAATTAATATC 86032 36 100.0 37 .................................... ATTTTAGCTGTAGAGTCTAGCATTTGATTTTTACACT 86105 36 100.0 38 .................................... GGATCATCTTTAGTCGGACGACATTTAATCTGCTTAAC 86179 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ========================================= ================== 28 36 99.9 36 ATTGAGAAATGTAGCTCCCCGATAGGGGACGGAAAC # Left flank : AAAAAGGAAGATATTTTGGAAGCAGTGCAGTTATTTTATGAACAGTATTATCAGAATTTCCAGAAGAAATTTTCACGAAGTGACAGGAGAAAACCGAATACAGTATTTCTGGGCGGCGGAAGCGGCTTTGTTTCCAAGACAGTGATTTACCCATTATTCGGAGAAAAAGAGGGCATTGAAACTGTAAAAAATATTTTTGACAGAACAAATGTGCCTAAAACCCATCAACATTATAAAGATACTCGTATAGGAGTATCCCCTCATATTTTAAAATGCACAAGATATCAGGGAAAAGAATATATGATGGGGGAATGTGAATTAAATATTATTTGAGCATTTTGTTCTTAAATGCGCGAAATTCTGTATTTTGCCGCGCATGGCTTAAATACTGGATTTGTGAGAATTTTTTACTTTCCAAAACGGCTGCATTTCAATAAAATTACTTTTCCCCCGCAATCCCCCTATTCGTCCCAGACAGGACATGGGGTTGCGGGGATGGT # Right flank : TTCATATCCAAATTTAGAAACAGTTACATTTGGCAATAAAGTGAATTATTACTAGAGAAACAGAGGTGATATCATGAGTCTTTTATATGTAAATGACAGTGGTGCAACAATAGGAATAGAAGGTAACTGCTGTACCGTAAAACAAAAAGATGGTTCGAAACGAATGCTTCCTATAGAATCTCTGGATGGAATTACAATTATGGGGCAATCCCAGATGACGACACAGTGTGCAGAAGAATGTATGCAGAGAGGAATTCCTGTAAGTTACTTTTCAAAAGGTGGTAAATATTTTGGCAGATTAATCTCAACAGGTCACGTCAATGTAGAACGTCAGAGAAAACAATGTGCACTCTATGATACAGGTTTTGCTGTGGAACTTGCTATGAAAATTTTAAGTGCAAAAATCAAAAATCAAAGCGTAGTGCTGCGCAGGTATGAGAAAAGTAAAGGTTTAAATCTGGAAGAAGAACAAAAAATGTTAGCTATCTGCAGAAACAAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAGAAATGTAGCTCCCCGATAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA //