Array 1 15397-17639 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTX010000030.1 Alicyclobacillus fructus strain FSL-W10-0057 NODE_30_length_24398_cov_42.737932, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 15397 37 100.0 35 ..................................... ATCGCGTCACTGCCCCGTCCGCTGGTCGTCTTTAC 15469 37 100.0 35 ..................................... TTCGACAGAGGTTTCCCTCTGAAGGACCAGTGTTT 15541 37 100.0 42 ..................................... CGGGTGACGTAGCCACCCATAGATCGTAGTTCGGCTGGAGGG 15620 37 100.0 37 ..................................... CGGTCCCGAACGTTGATGAGCCATTGGAGTGCGACAC 15694 37 100.0 35 ..................................... TACGTTGACCACATGCCAATGTATTCCTATCTAAA 15766 37 100.0 37 ..................................... CGGCGGCGGTAGTTCTTCCACGATTTGGACGCGTGGA 15840 37 100.0 36 ..................................... GCTGAACGGGATGTGATGCAAAGTCGGCGCGATAGC 15913 37 100.0 36 ..................................... TGGCTATCGCTCAACGCCATCCGTCGTTCAAAGGCC 15986 37 100.0 37 ..................................... ACGAGACGCGGGAGAAAGCGCTGAACATCGCGCTGAA 16060 37 100.0 37 ..................................... AGGAATTTCTTCGACGTCATAAACAAGCAGCCATCAC 16134 37 100.0 35 ..................................... CCCAGAGTTCGATATACAGTCGCTCAATGTACCGA 16206 37 100.0 37 ..................................... TGCCCATAATATCGAGCATTTTCAACGTCATCCGGAT 16280 37 100.0 39 ..................................... GTCCGAGAGTCGAGGGCCTGCAGTGGACGCGCGCTGATG 16356 37 100.0 40 ..................................... CGTTCGCATTTTTCCGACAAAGGGCGACAAATATGACAAA 16433 37 100.0 37 ..................................... CACCCGCTTCAGAAATCTGGTGTAAGTCCGAGGAAAA 16507 37 100.0 37 ..................................... TAGTAGCCTTGGTAGAAATAGGATTGTCCATTCACGG 16581 37 100.0 35 ..................................... CGCTGCCCCTGCTTGAGCAACAAGGGTGGAAACGA 16653 37 100.0 33 ..................................... CTCGCCTTCGAGGTAGGCCCGGAGCACGTTCAG 16723 37 100.0 40 ..................................... TCGCACGAGAGACTCCGGCAGGCTGGCATACCTGGGGAAA 16800 37 100.0 35 ..................................... TCAACCGCCTCGCGGATGTCGACTATCCGACCTCC 16872 37 100.0 37 ..................................... TTGATCGCTTCGTGCAGGTCCCCGCCGTGCGCCACGT 16946 37 100.0 35 ..................................... AATGGAATATACATGGAAAAGGCCGCCCGAGGGCG 17018 37 100.0 36 ..................................... TGTTTCTCAGCAGGGCAAGGCTGTTGCCTTCGTCCG 17091 37 100.0 35 ..................................... CGCGACGGCCATGGGTTATTTGACGCCCATCCTAC 17163 37 100.0 35 ..................................... TCAACCGCCTCGCGGATGTCGACTATCCGACCTCC 17235 37 100.0 37 ..................................... TAGAGGCCGGGGAGTTGCAAGTTGGTAGCAATCCTGC 17309 37 100.0 35 ..................................... CCAAGGCCGCAATGGACGCCCGCAATCCATGCACC 17381 37 100.0 34 ..................................... TACCAACATACTATCATCCTCCCATTGAATTGAA 17452 37 100.0 39 ..................................... ATGTAAAGCTCCAATTGTGCGATTGTCCACGTTGCACGC 17528 37 100.0 38 ..................................... AAGCGGTGGGTCACGCATGAGGTTTTGCCCTCCATTCG 17603 37 94.6 0 ...............C..............C...... | ========== ====== ====== ====== ===================================== ========================================== ================== 31 37 99.8 37 CTTGTTCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Left flank : AATGAGCCAATCGTCCTCCACGCCCGATTCCTCCCTTTGGCATTCCATTCCTTCTGCGTCGAGGTGCGCGGGCGACCCGCGCAGGACGCCGTAATTTTAGAGCGGAAGCGAGCCCGCTCAACCCTCGCGACGCTTGCAAGAATGGTGATAGAATCAGCATGGCCCATCGCGCAGGGCTCTATACGGCTTTCTGAGAAGCTTCGTGAGCGACGGAGAATGGGGCAAGACATCGAGCAGAAGCTAATGGTTGCTCGGCGATGAAGCGCCGAATTGACGTGCCTGCGACTTTCATGCCGAGATGGGTATGCGTTGCGCGAACCTCAATCGATGGCGAAAGTGCGGGGGGTTCGCGAAAACCGAAAATTGCGCGCCAGGACTGGATTTTTGCGCTCGCGGAGGTTATGATGAGAGCAGTTGCGAGGGGTTCAGAGCGCGGGTCAGGGATAGGTTCGCGTTTTTCGCCCGGAAAGCCGCGTCTGGCGCGGCCTCAGGAAAGAAGC # Right flank : CGATGGCCAACAATACCATCCGTACCCCATAGGACGGGAGTTGATCCACCGAGACGTTGGCGCATTGAAGTGTCCGCTGGCATCCTTGGCAATCTCACGAAGTCCACCGCCCGGCGCCCCAGCCCCATCTAAAAAGGCCGCTCCGCATCGGAACGGCCTTTCTATGCAAACCCATCTCACCGATAGACGTCTCCCCCGCCGGCCCGAAACGCCTCCGCCTTCTCGCGCATGCCTTCGGCAATCACCTCCTCAAGCGCCAGCCCGTGCTCTTGTGCGTACGCGCGTATGTCCTGCGTGATCCGCATGCTGCAGAACTTCGGCCCGCACATGGAGCAGAAGTGCGCGGTCTTCGCAGGCTCCGCCGGCAGCGTTTCGTCGTGAAAGCTTTCGGCCCTGACGGGATCGAGCGCCAGGTGGAATTGGTCGCGCCAGCGGAATTCAAAGCGCGCCTTCGACAGCGCATCGTCCCACTGCTGCGCTCGCGGGTGGCCCTTGGCCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGTTCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.10,-13.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 283-830 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTX010000009.1 Alicyclobacillus fructus strain FSL-W10-0057 NODE_9_length_95449_cov_48.749282, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================= ================== 283 32 100.0 39 ................................ ATATCCTGGGTCTTGGCGAACCCAGGCAAGGAAGGTTGA 354 32 100.0 45 ................................ GCTACTGTCATGGAGTCATCTACTGTCCATATCCCACATCGTTGA 431 32 100.0 44 ................................ TTGCTCCTCCGATTCTCCTCCGCGCTCCTTGACAGCAGTGTTGA 507 32 93.8 43 ......................TT........ AGGCTCCGCGGTGTCCGCCCATCAGGTGGAATGGGGCGGTTGT 582 32 96.9 41 ............A................... AAGTCGTGATTGAACCTGTCGTCACGCAATATCCCGGTTGT 655 32 100.0 41 ................................ AAGTCGTGATTGAACCTGTCGTCACGCAATATCCCGGTTGT 728 32 96.9 39 .......G........................ GCGTTCATTGGCCGCTCCCATCCGGTAGTATTCCGTTGT 799 32 90.6 0 ..........G................T.C.. | ========== ====== ====== ====== ================================ ============================================= ================== 8 32 97.3 42 TCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Left flank : GTACCGCGAAGCGACGACGCACCACCACAAACGTGGATTAGTTCTTACGGCCCGGAAATTCGTGCGACTGGTCTATGCGCTGCTGAGCAAAGGCCAAATCTACGACGAAAGGCGGGCGACAGGCTAAGCGCTGACTCCTTAACCGACATCCTGGAACATTCGCTACCAAGAGGATGAAAATTCCAATCATCCTCCGTAGGGGGGCTTGCTTTGTCTCAAGTTGAACTTACACGAATTTCATTCGTCACCCCCTTGACATTTCACCGCAGGTCTTATCGTTGAT # Right flank : CTTATTTCTTGGGAATGTGGGCGTCCACACGATGCTTGGGAGGCAGAGTGATGGAAACGTCGAAGGGTTTTCAGAGTTCACGAAGCCAAATCCACCAGAGCCCGTGAAATATTTGGATTTCATTGACAAGTGTCGGTGGGCTCCCGCTCTGTCGGTTTTCGCGTACGTCGGGGCGCAGTCTGTCCCATGAGTGCGTCAGCACAAGACTCTGAATGGGGTTCTGTTCTGGATCATGGCATCTGTCCTCGCCATTCTGATAATCGGTGTTCTGTATGCGTTTGTCCGCTATCTCATTGCATATTTCAGATGCACACGGTGAGTGCCACACACGCCGTGTTGAAGTGAGAACGGGACACGAAGTCCTGATCGAGCCACCGTGCATACGACGGCCACCTTCAGGCTGCGCCATGAAGCGCACCTTCGGGTGGCCGTTTGACTAGTTCCTAACTGAACCCAAATTCATTGGACCCGTTCAAGAGCCCCCGTCGCCTACCGGCTGG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 1612-108 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTX010000033.1 Alicyclobacillus fructus strain FSL-W10-0057 NODE_33_length_21195_cov_45.521758, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 1611 36 100.0 36 .................................... CTCAATGTCTGGACAGTCCTCAAACAGCCTCTCAAT 1539 36 100.0 38 .................................... CTGAGGAGGGGACGGAAAGTGACCGGGCGCGTGTTGAA 1465 36 100.0 36 .................................... CCAGACTAATACGGATGATTTAGATCTCTCCGTTCT 1393 36 100.0 40 .................................... CGTAGACCCAAGCGTCGGGTAGAAACACGAGTACACGCGC 1317 36 100.0 37 .................................... CTTGCCTGACGGACGTAGATATCCTCGTCACGATGAC 1244 36 100.0 37 .................................... CAATATCTGTTTTTAGGTAAAGCGTATATCGACCGTC 1171 36 100.0 37 .................................... CTTTCCATTTTACGCCAGTCTCATCACGGCTGGCCAG 1098 36 100.0 37 .................................... CTTAAATATGGAATCAAAAGCGTACCGAAATGGTGAC 1025 36 100.0 39 .................................... CATCCTGCTCCATCACTTCAAAATCATCTGCCATGTTCG 950 36 100.0 36 .................................... CCTTTCCAAAGCCTCTTTCGGAATGGAGCCGAGCTT 878 36 100.0 37 .................................... CAATCTCGCTAATGGCTTTGTTTAGGTTAGCTGTGTC 805 36 100.0 39 .................................... CCTCTTCTCGAATCGTCCTCTTCATCGTCTGCCTCCTCC 730 36 100.0 37 .................................... CGACACCACTTCGGACTTTCCGTGTCGAGGCGGCATC 657 36 100.0 38 .................................... CGATTTTAAGCCTATTTTATTCCTTGGAGGTATTACCC 583 36 100.0 36 .................................... CCAACTCATACCATTCATCTAACCCTGTCTTTTCTT 511 36 100.0 39 .................................... GGGTTTGTTCGTCCTATTGTCCAATACACAGTTGATAAT 436 36 100.0 38 .................................... GTCATTAACGACAAGAGCACATACAATCTAGAATTGAT 362 36 100.0 36 .................................... GGTAAGATATACGATCCGTCATTTGCTGATCGTCGC 290 36 100.0 37 .................................... GGGGCATCGGAGTCAAATGCTCGTCGGTACAATCTCG 217 36 100.0 38 .................................... GGCGACGTCTCCTACTCAGCCGATCTGTCGCTAGCTAC 143 36 97.2 0 .T.................................. | ========== ====== ====== ====== ==================================== ======================================== ================== 21 36 99.9 37 GCTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAG # Left flank : CGGGTGGACTGTCGTCCACGACGGCGCTCACGGGATCCACGGAGGAGGAGCAGTTCGTCGAGGCGTAATGCGATTGGGTTGACGATCCGACGACGCTCGCAACGCTGGCGCTCTGCGAAGTGGTTTGAACTCGGCATGGCACTCCACTGGGGCCCCGACGGGGCCCGCATTTTTTTTGCATGAACGGATGGGGCGTGGGGCGAGATAAAGGCGGAGGAAACGATGAGGCAGGTCGGCGCGATGCGCGAACAAGCGAAGGTCGGAGTCATGCGATGGAGACGGTGGGACTGGTGACGGACGGGGGACCGCGTGCGCGAACCGGAATCGATGGCGAAAAGCCGGGGGGTTCGCGGAAATGGAGAATTGCGCGCCAAGACTGGATTTTTTCGAGAAACGGGGGTATGATGAGGGCAGTTGAACGCCGCGCGAAGCGCGGGTTCGGAAGAGGTTCGCGTTTTTCGCCCGAAAAGCCGCGTCAGACGTGGCCTCAGGAAGGAAGC # Right flank : GGGCGACGTCTCCTACCGTGAAAATGGCAAAAAAGGAACCCGGACCTTCCCTTCGTCAATCATGGAATATCGTGGATATTCTTTCAGGAGGCTTCCTCTGCGACGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.00,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 16986-14452 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTX010000036.1 Alicyclobacillus fructus strain FSL-W10-0057 NODE_36_length_17114_cov_36.780488, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 16985 37 97.3 37 ................................T.... TGGTGGGGTTCGAGTAGAAGGGAGTAGATGAACGTGC 16911 37 97.3 37 ................................T.... CAACATAATCCGACAGCAGAGGAGAGATGCAAGAGAC 16837 37 100.0 35 ..................................... GAGCTTGTCGAGCGCTTCCGGAGGAATCTGTGTAT 16765 37 100.0 36 ..................................... GTCTGCGTCAGTCTAAATGAAAACAGCCCCCATCCC 16692 37 100.0 35 ..................................... GGTGTCCAGCCAGATAACCTGACTACGCAACAGGT 16620 37 100.0 36 ..................................... GGTCAAGCTCGGCGCGCTGCTCGACATTCACGAGGC 16547 37 100.0 35 ..................................... ACAGCATTGCCGGAAAGCGTAAAGCCTCCCAGGAC 16475 37 100.0 36 ..................................... AAGACGAATCATACCAATTCGAACCAATGATAGGCG 16402 37 100.0 35 ..................................... GGAGTGGTGTTATACGTTGGTCTGCCAGGAAAAGG 16330 37 100.0 36 ..................................... GAGAGCGACGCATCAGACGCCAAGAGACTCGCAACT 16257 37 100.0 37 ..................................... TCTGCACGTCTCTGAGCCGACGGTGCGCCGGCTGATT 16183 37 100.0 36 ..................................... GCGGCTCGAACTTCACGTGCCTTGCACCTCCTCGAT 16110 37 100.0 35 ..................................... GATCCTTGGGCTCTCATGGCATCACGCACGGCGTC 16038 37 100.0 36 ..................................... TTGTACTATTTTCAGATCCCACGCATATCTTATTAG 15965 37 100.0 40 ..................................... GCAGATGGACTTCTCGGCGGCGGTTAAGCAGTGGCTGGCA 15888 37 100.0 34 ..................................... GCCACGGCATCGGGATACGGATCATGCGGTTGCC 15817 37 100.0 36 ..................................... GGTGCGTGACCTCGGAAGGGAGTTCGCGCACTTGGC 15744 37 100.0 35 ..................................... CAGCACACCGACGGTCACTCCACCGTCCGACGGCA 15672 37 100.0 37 ..................................... CCCGGAAAGGTTTATGAAGAGGTTCAGAGACGAATTC 15598 37 100.0 37 ..................................... CCGACGGGGGCTCTTCGGGTAGTCGATGTCAGTGTAG 15524 37 100.0 41 ..................................... GGGTTCATGAGTGCCTCGTCCGGGTGAAGATAGGCCGGAAG 15446 37 100.0 36 ..................................... AAGTACGAGCACATGCTGCTCGGGTTGCCGTCGGCC 15373 37 100.0 37 ..................................... CGGCGCTCCTCGCTCCTGATGAATCTTACCGGTAAAT 15299 37 100.0 36 ..................................... TCGGAACGTGTCCGTGATCTGGCTCATCAGGCCGGA 15226 37 100.0 39 ..................................... GCCCCGCAGCATCGCCTCCATGCTCTCTGCCAGCCGCAG 15150 37 100.0 37 ..................................... GGTGTACGCTACGCGACGCTTACTTGGAGGTGCAGTG 15076 37 100.0 35 ..................................... GTCAATGCACCAGTAGCCTGACTCGCCACCGATCC 15004 37 100.0 35 ..................................... TATTCACCGATGAGCAGTTGGCAATGTTCGCAAAG 14932 37 100.0 38 ..................................... GAATTCGAGCGAATGGCCGTGAGCGGAGCCTGAGCCAT 14857 37 100.0 40 ..................................... ATACGCATCCATGATAGCCTTCATTGTACATGCTCCCCTC 14780 37 100.0 37 ..................................... TATAAGCGCGCCTCTGGGCTCGTCAGCGAATAAGCTG 14706 37 100.0 35 ..................................... TTTTTGCGATGGCACGAACGGTCATCTGAGCCGAC 14634 37 100.0 35 ..................................... GATAAACGCCTTGAGCGAGGGATACCACTCGGGCC 14562 37 100.0 37 ..................................... CGGTACTCCCCTCCCCGGGTCCGCGCCAGCACGTCGC 14488 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 35 37 99.8 36 GCTTCAATGGGGCCGCCGACGATCTCGGCGGAACAAC # Left flank : ACGCTTAAGGTCATTGTCTCTGGGGATACCCCAGCAACTCAACCCTGAGCTTGGCGTGTGTGTTCATGAAGAACTGACTCTAAACCATTTCATACGAGGGGACGAGGACATGCAAGCGAATAAGGTCA # Right flank : GCTTCCTTCCTGAGGCCACGTCTGGCGCGGCTTTTCGGGCCAAAAACGCGAACCTCTCCCAAACCCGCGTTTTGCACGGCGTTCAACTGCCCTCATCATACCCCTGTTTCTCGAAAAAATCCAGTCTTGGCGCGCAATTTTCCATTTCCGCGAACCTCCCGGCTTTTGGCCATCGATTCCGGTTCGCGGACGTGGTGACTCGCACAGAGACTCGTACAGAATTGTAGAAGGATTTCAGATCTGTTGCGCGAATTCGTGTCTTCATCCCGGGAAGGTGGCCTCGCGTCCCTCTGGCCCTCCGCAACCGCGCGGCAAAGGGCGTCGTTGAGGCGCCGGAAGACGTGCAGCCCGAGATGTTTCGCCTTCCTGACCTTCTGGGGCGCGATCGCTCGGCAGGTCGCACGCCTCCAGACTTACCTTTCTCATGTGGGAGGTCCGCCCAATGGTCCTGATTGGTGTACTCGTCGTCATCGTGGGGTTTGCCCTTCGCGTGAACCCGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGGGGCCGCCGACGATCTCGGCGGAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.10,-13.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 140-1793 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTX010000044.1 Alicyclobacillus fructus strain FSL-W10-0057 NODE_44_length_9938_cov_44.171461, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 140 36 100.0 38 .................................... GTTTGCTTCCCACTCTGGATCGCGGAATAGTGGGATAC 214 36 100.0 38 .................................... GGTTGCGCACCACAACCTGGTCAATATGCAAGAGCGGC 288 36 100.0 38 .................................... GGACAGCGCTACAATGTGACGCGGACGGGCGTCACGCG 362 36 100.0 37 .................................... GACCTTGACCGGTAGACTTGTGATGGAGAATGTCCTG 435 36 100.0 36 .................................... GAACACCCCAGACGCAAGCCTGGGCCAAACAGCGCC 507 36 100.0 35 .................................... GCTCATTTCGACGCCTCCTTAGTCCTGCATCACAT 578 36 100.0 37 .................................... GCGGTTCTGTTCCGGTTTTATTCCGGTTCAAATCGCC 651 36 100.0 35 .................................... GACGTCCGGCGTGTGGGGCCATGAGGCGCAGGGCG 722 36 100.0 38 .................................... GGACGTTGTGCTGCTGGCGCTCATCGGCCTCTTGGTGG 796 36 100.0 39 .................................... GGGTGGATGTGTGCGGAGGTATTGAGATGTTGGATTGGC 871 36 100.0 37 .................................... GGGTTCGTTTGGTTTCGGTTCGCAGCTTTATTTCGCA 944 36 100.0 38 .................................... GCGGGAGCGGCATGTCCGTGAGATTGATTATTGGATGG 1018 36 100.0 37 .................................... GCGGCCCGCCTTGACATGGGACCCCCTGGCCCCCCTG 1091 36 100.0 39 .................................... GGTTTGCGTCTGATGGTTCGTCTCAATTGGGTGACCTCA 1166 36 100.0 41 .................................... GCTTGAACGACATCTTGTTGTATATGAAGAGGAATCGAATT 1243 36 100.0 36 .................................... GAACAGTTCCCGGATCCGTGGGCAGGCATTGACGAG 1315 36 100.0 40 .................................... CACCAGGGAGGCACCCCCTGCTAGGCTTGCCCGAGCCCTC 1391 36 97.2 36 ....T............................... CAAGGATAGCAGAATCCCCTAAACCCCATTGCCCAT 1463 36 97.2 40 ....T............................... CAACACATCGCCGGTTACGTCCAACGCCTGTAGGAACTGA 1539 36 94.4 36 ....T.............A................. CGTCAAACTGTTCCTGTCGATGATCACGAGAAGGTT 1611 36 94.4 37 ....T.............A................. CCGTCATTGGCCCGCCACCTTCACCCAGCGCAGCACT 1684 36 97.2 38 ....T............................... CTCTGGCGCGTATATCCATATCGCAGATCGAACGCGCT 1758 36 91.7 0 ....T...............C.............C. | ========== ====== ====== ====== ==================================== ========================================= ================== 23 36 98.8 38 GTTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAG # Left flank : GAGGGATCGAGCTCTGGTGGTTGCTTATCACCATCGTAGCGCGCAACATCGCCATTTTCATGATCCCGTGGCGTCGAAAATCGACATGAGGGTCTACTCAGCCGATCTGTCGCTACTCAGCCGATCTGTCGCTAGCTACG # Right flank : GGAGGCTTATATCTTCCGAAAGTCACCCCGTAAGCCAAGCCAACACCCGACGGCCACGACGGCCATGCCGATCAGGGCAATGGTTTCCGAAGGACTGAGCCATCTATCCAACATGCCACCGAGCCACGAACCGAGCGGCGGGCCAAGTGCAATCAGGGAGCCCCGTAGGCCCATGATGCGTCCCATGACCTGCGTCGGCACAGAGCGCTGGACGACGGTCCGCGCCAGCGGTGGATATCCGCCAAACAGGAGTCCGGCGCAGGCGAGGGACACGTAGGTGAGTGTGAAGGCGTGGATCCAGAACAGCGGGGCGAACGCCGCGCCCCATCCGATGATCATCAACGCCATGACTGCGCCGGTCTTGCCTCTTTTGGGGATCGAGCCGCTTAACGCCGCCCCAACAATCGAGCTCATGGCATAGGCGGTCCAAAGGCTGCCTAGGATCCAGGCGCCTCGGCCAAACTGCCGGTGTGTCAGGAGGGGCAACTCGATGTCAAGCG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.10,-13.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //