Array 1 359771-357223 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGSD01000003.1 Oligella ureolytica strain NCTC11998, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 359770 28 100.0 32 ............................ ACGAACAACAAAATAACGAATCTGCAGATGAA 359710 28 100.0 32 ............................ TTTTACGTAGCCTACAATATGGCGCATCTTAA 359650 28 100.0 32 ............................ TGAATGATCTTAGTCGACAGGTTGAATGGCCA 359590 28 100.0 32 ............................ TCAATGGAGCAGAAGACATGAATAAACTCAAA 359530 28 100.0 32 ............................ TGATTCTTCGCCTGCTCAATCTGCTCCATTCG 359470 28 100.0 32 ............................ TAGAAATTGCTTGGGATAAAACACAAGGTGCT 359410 28 100.0 32 ............................ GTCAGAAGTGCCAGAGTCAACATAACCCAATA 359350 28 100.0 32 ............................ GCAGACATGGAGCTGATTATCCAGTTTATTTT 359290 28 100.0 32 ............................ GTGACTACGGTACGATTAAGCAAGGAATCAGC 359230 28 100.0 32 ............................ GATAAGCGTCGTTTGCATGAGATTAGATTTCA 359170 28 100.0 32 ............................ TTGCTGATTACCAACTAACACACGGCTAGGGA 359110 28 100.0 32 ............................ AATGTCGCTAAAAGATGACGCTGATAGTAAAG 359050 28 100.0 32 ............................ TAAATTTTTTAATTCTTATTTACATTATACCA 358990 28 100.0 32 ............................ TAATTCGATTAATTTATGCTCAACCATTACAG 358930 28 100.0 32 ............................ CATGCAACCATAAACATGGGCAAAAATACCGT 358870 28 100.0 32 ............................ TAACGAAGTTGGTGACCACTTGACACCCTGCT 358810 28 100.0 32 ............................ TTTAAAAAGCTTACTGGCTTTTTTGGCGTTTA 358750 28 100.0 32 ............................ TCATGAGCAGAGTTAGAAATATAAAATGTGTC 358690 28 100.0 32 ............................ TTATCGGTAGGACTAATCACGCCTAAAATACC 358630 28 100.0 32 ............................ TCTCGGGCAATCGCATATACAATTGCCCTTTT 358570 28 100.0 32 ............................ ACCTTGCTATATTGCTCACTATCACCCCCTCA 358510 28 100.0 32 ............................ TAGAACACCTGACCAAAACGCGCTTATGTGGG 358450 28 100.0 32 ............................ AACACCAATACATGCTAAAAACTCTAATCTCT 358390 28 100.0 32 ............................ TGAGATATTGAATATGGCAAATGGCAGGCAGT 358330 28 100.0 32 ............................ TGACGAGAATTATCTAACTCTTGACTCATGTT 358270 28 100.0 32 ............................ TCTAGCTACTGAGGTGTACCCAGCTTGAGCTG 358210 28 100.0 32 ............................ TATCAGCGAATTTAATAAGATATGGAATGATT 358150 28 100.0 32 ............................ AAGTAGTGGCAGCTGACTCGGATACGGTCTCA 358090 28 100.0 32 ............................ TCAAACTTGATAGACGTTGATAAGGTCACGTC 358030 28 100.0 32 ............................ TTTTTTAACGCGCTAGGCGTTGGCGTGGTGGA 357970 28 100.0 32 ............................ GTAAAAAAATTAAACAGTCGTCGCAAGCAGTA 357910 28 100.0 32 ............................ CCTCTAGAAGTGCGTTATTGTGTGTCGATACC 357850 28 100.0 32 ............................ TCATAGCTAGGCCGTTTGCATGTGCTTAAGCG 357790 28 100.0 32 ............................ ATTGGCTTTTAAACTTTTACATTAAAACAACA 357730 28 100.0 32 ............................ ATTTTATTTATTCCTTAAAGGCAGCCTGACGG 357670 28 100.0 32 ............................ ATCTCCCGTAGCAAACTGAAAAGGTACCTCTT 357610 28 100.0 32 ............................ ATTTACATATCTTGCGAATCTTGTTTAAGTTA 357550 28 96.4 32 ......T..................... TTTTTGAAAATTTACTTTCATTTTATACCCTC 357490 28 100.0 32 ............................ ATTATTATCAAACCGACCTAAAGCCCAATGCA 357430 28 100.0 32 ............................ ACTTGTTAACATCGCCGCAAATACCCCAATCG 357370 28 100.0 32 ............................ AAAGGCGTTATCCGCTTGGAAGCCCTCTAGCT 357310 28 100.0 32 ............................ TTAAACTGATATTAATCAATTATTCAATTGTA 357250 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 43 28 99.9 32 GTTAGCCACCGCACAGGTGGCTTAGAAA # Left flank : GTACCTGAAAAGTCTAATTGTTATTTGTTAGTTAAACGCTACCGAGTTGACATGAATTTAGAGAGTTTAACTCGCAGGTTTATGCAACGAGAAAGTAAAAGAACGGGCAGAGAAATTAGCTTTGAAGAGGCTAGAAGTATACAAAATCAGCGTTTTGCTAAAATTAATAACTTAACCATACAAGAGGCTGAAAAACATTATGAGGAGCCAAATGTAAAGAACTTACCATTCATTAAGTTGAAAAGTTTGAGTTCAGGAGAGGAATACTCTTTGCTAATAGAACAGATTAGCTCTGAGCGACAACGTATTGGTAGCTTTAATACTTATGGGTTAAGTAGTCAAAGCACTGTTCCACACTGGTAGTGTAAAAATACCTTTATTTTTTTCTTTAAAAATTTGGAATAAAAATCAATGAGTTACATTAGGTAGTAATATTTTGGTAAAAAAAGGTTTTATCAATAACTACTTGATGTAGCTTATATTTTTCGGTTATTATTGTT # Right flank : CCAGTCAGCACTTTGTGTTCGCTGACACAATAGATGTTTTTTAATTGAGTTTATTAGAGTGAAGCTATGGAATGATAGAGTGTAGCTTCTACAGTGATACGCTTATAGAGCAGTTTATCAAAGGAATAATTACGCCTACTAAGCAGTATCCTGCCATTTTAGTACTAAATTGAGCGTCCTATAAATATAACATATCACCGAAGTTATCAACTTTGAGCACAAGATATGTGATGCCAATGCTTTGACTATGGATAAAAAGCTCAGATTACCGTCTTTTAAATAGCAGGCATTGCAAAAGTAAGGCGCTTTTTTTATATTATTCAAGACAGTTCATAAATTAAACTGTTATTTTGTCAATTCTTGACGTGATTAAGCCCAAATTTTAAGGTTCAGAAAACGCCGCATTACGACAATAGCTTGCTCTCAGTCACTAACTAAAATGGAGTATATAAGTGTCTTTTCTACTGGTTTTTCTTGGTGGTGGTTTAGGATCTGTAGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCCACCGCACAGGTGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //