Array 1 93-3094 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEFCH010000052.1 Acidovorax sp. IB03 NODE_52_length_21117_cov_100.003561, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 93 36 100.0 29 .................................... CAGCGTCTTCAAACACTGCAACCAGCTCG 158 36 100.0 30 .................................... CAGCAGCGCCAGCACCCGAACAACCCCGCA 224 36 100.0 30 .................................... CGTGGATTCGTGCACCATGGGGGAAGCTCC 290 36 100.0 30 .................................... CCACCTCGCGCACGGTGCTGCGGGCACTCA 356 36 100.0 31 .................................... CCCGAGCGCATTTCAATCGCCAGCATGCCCT 423 36 100.0 30 .................................... CAGCGTGGTCAGCTCCAGCGCGTGCGCCAT 489 36 100.0 29 .................................... GTCAGTAGCTGCACTTTCAGAAACTGAAT 554 36 100.0 30 .................................... AAATCAAAATTCCGCCGAAGTGAATAGACT 620 36 100.0 30 .................................... TGTGGGCAGTCCTGACTACAAGGAACTGTT 686 36 100.0 30 .................................... CATGACAAATGGACACGCCACCCCGCCCGA 752 36 100.0 29 .................................... ATTTTCTGGCATCTTTGCGCACCAGCTCC 817 36 100.0 30 .................................... TCGCGCTATGACGACTACAACTAAATCTGA 883 36 100.0 30 .................................... TGAAGCCTCCGAAGCCCATGTGTTGCCGGA 949 36 100.0 30 .................................... GCGGCGCTGTTTCTCCTGCCTGTGCCCACA 1015 36 100.0 30 .................................... CGTGCTTCCATCGTCTCCTCCGGCAGCACT 1081 36 100.0 30 .................................... CCCGCTGGGCGTGCGCAACGTCACGGCCAT 1147 36 100.0 30 .................................... TGACGGTACCCAGCCCCGCGAGTTGCCCGG 1213 36 100.0 30 .................................... TGGAAGATGTGGTTGCCGAGGAGCTGTCCA 1279 36 100.0 30 .................................... TTCCTGTAGCCCCTATACAAAGATTGTCTG 1345 36 100.0 30 .................................... TAAGACCTTCAAAGAGATGTCTTACCACAG 1411 36 100.0 30 .................................... ACAAGCACGCTCGTTGAACGCTCGTTTAAG 1477 36 100.0 30 .................................... GGTGATTTCCGCCACCGAGAACCCGGCGCG 1543 36 100.0 30 .................................... AGCCACCGCCGCCACCCGCTGGGCGGACAG 1609 36 100.0 30 .................................... TGCGGCGATGCTGGGGTCGCGCCCGAAGGC 1675 36 100.0 30 .................................... TGCGCTGTCTTGGATCAGCTCCACAGGCAG 1741 36 100.0 29 .................................... GCCGTATCGTTCGGCCAAAAGGCAGGCTA 1806 36 100.0 30 .................................... CGTGCCCCAAGACCTCAACAGCACAACGCC 1872 36 100.0 30 .................................... CGGTGATGGTCTGCATGGAGACGAGTCCCC 1938 36 100.0 30 .................................... GGTCGATCCAGTAATACTCCGCTACCACCA 2004 36 100.0 30 .................................... GATCGTCAACGAGGGTGGGTACGTTCTGCA 2070 36 100.0 30 .................................... TCGACTACACAGGAAAGGCCATAGGCTCGC 2136 36 100.0 30 .................................... CCGCATCCGCTCCCCGATCAAGCAGCCCCG 2202 36 100.0 30 .................................... GGGTGGTGGTGTGGCGGGTGCGCGCATCGG 2268 36 100.0 30 .................................... GCCATGCTGCAGTGGTCGGACGATGGCGGG 2334 36 100.0 30 .................................... AGCCCGCGCCGCCAATCGCCAGATGATGCA 2400 36 100.0 30 .................................... CCAAGCCTTATCGACCGCTGGCTTGTGCAG 2466 36 100.0 30 .................................... CGATCAGTTCGTTGGCAAGCGCCTGCATGT 2532 36 100.0 30 .................................... GGTCTGTGGACTCCACCAGGCGCACGCGCA 2598 36 100.0 30 .................................... CGATCTCGAGCGTGTGCAAGCGGCGCCGCG 2664 36 100.0 30 .................................... CTCTGTCAGCAGTTGATCGTGTGCTTTGTT 2730 36 100.0 30 .................................... AGGCCGCCAAGGCTGGCGCCGCGCAGTGGT 2796 36 100.0 30 .................................... CATGCTGACCAACGCCCTGCCGCAGTTGCA 2862 36 100.0 30 .................................... CATTGAGGTCACGGACCCGGTGCCGGTCAA 2928 36 100.0 30 .................................... CTTTGGCCGCATGGCGACTTCTTCGGTCGC 2994 36 100.0 29 .................................... TTCGGCGCCGCGACCGGATCGCTCGAATA 3059 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 46 36 100.0 30 GTTCCGGCCAGTGCGCATATCCCAGTGATCTAGACT # Left flank : TCATCTGCGGATAACGTTTGACCCCCCTCAACGGTGGACCTTAATCAGCGTTGCCCTAGACTATTTCGACGATCCACAGCCCCGCCACTGAGG # Right flank : TCTGATCGCGATAACCTCTTGATAACAAAAGAAGTTTTCGCTTTCAGAAGACTAGAAAACCGCGCCATTTGCTAGAAGAGGTCGAATTGATCCGGCGCTTTTTGCGCTGGTTGTTTGTTGCGCCCGTGGTAGGTGATGGCGCGCTCGTACTGTTTGTCGGTGAACTGAAAGATATTCACTTTGCCGCCCTGTGGCAAGGCGCGTTCTACGGCTCGGCAAAGCGTGTCCACCTGCGCCTGACTCGTGCAAAAGCGCATGTACACGCTGAACTGGCTCATTTCAAAGCCCAGGTTCAAGAGACCATTGCGGAACTGCGTGGCGGCCTTGCGTTCGGCTTTCTCAATCACGGGCAAATCGAACATGACCACCATCCACATCAATCGGTATCCAGACAACATGGTGTAGCAATGGGCTGGCGTTGGCGGGGTTCAGTCCGTCTCCAAACTGCCCGCCAGCGACAGGGGCAAGCCGGGCAAAGGCAAATCCAGCTTGGTGCGCTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGCCAGTGCGCATATCCCAGTGATCTAGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCCGGCCAGTGCGCATATCCCAGTGATCTAGAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //