Array 1 1161236-1160736 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP019551.1 Athalassotoga saccharophila strain NAS-01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1161235 30 100.0 38 .............................. TTGCATATGTAGAACGTGAAGAGGTGTCAAATTATCTT 1161167 30 100.0 36 .............................. TTTTATATTATCACCTCTTTCAGTACTTACAATATT 1161101 30 100.0 37 .............................. AGCATACTCACTCCGCTTAACGTTGTCAAGGGTAAAC 1161034 30 100.0 37 .............................. TATAATATCCGGGTATTTCAATTTTAATTACGTTTTT 1160967 30 100.0 34 .............................. ATAATAAAATGAAACCTCTCGTTGAAAATCTACA 1160903 30 100.0 39 .............................. TGAATTTGAATGCCTTGTGTTAAAAATCTGTTAAACTTC 1160834 30 100.0 39 .............................. CTATACATAGTATCTCCTCCTTTTAAGGTAAAGTTTCTC 1160765 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 100.0 37 GTTTCTATCCTACCTTTGAGGAATGAAAAC # Left flank : ACATATTGTGATTGGTAAGAATATTTAGTCGTTCATTATCAATTCTCAATTTTTTCTACGTGCCACCCGCTACCCGCCAATTATTTTGATCTGGTATGTTACAGCATAGGTGAATAACCTCTCATATTTTACCATTGGATTGCGAATATATATTCTTTTGTTCTAAATTCAGCCTCTTTTCCCCACCTCTTTTGTTACACACCCGACCCTTAACATTCAATCACATAAGAACTCATATTAATTATCTCCAATAATTAAATATATTTACATATATCCACAGATCATTTCCATCGCCTCCTTTTCTCTTAACATCATTCATACTTCATTTACCATCGTCGTCGACCTACGATACTCGAAAAACCCCCGGAGATCGACGACGATCGGATTTCTTACATAAATAATTATCACTAAAGCTTTTATCTCACTTTTATGTATACAAGTTCACATACTTTTTCCCAAAATTGACTTTTAGAAATCCTTATGTTATACTATGTCAACGA # Right flank : AACAACAGTCATCTTTGATATTTTGCCTTCATCCAGAGTTTCTATCCTACCTTACTGCCTTCGCAGCCTGCAAAAGACAGCAGAAGAGGAATGAGTTGGCGCATGGCCTATGGCCAATGGCTCTAGTGAGCAGTGAGTGGAACTAATTGATAATTGCAAATTGAAAATTGTCCATTTTCAATTCTCAATTTTATTCTACGTGCCACAAGCTACGTGCTACGTGCTTAATTCGGTGCATGGCTTATGGCCAATGGCTCCAGTGAGAAGTGAATGGGACTAATTGATAATTGCAAATTAAAAATTGAAAATTGTCCATTTTCAATTCTCCATTTTTTACTACATGCCACGAGCCACCCGCTACGTGCTTAATTCGGCGCATGGCCTATGGCCAATGGCACCGGTGAGCAGTGAATGGAACTAATTGATAATTGCAAATTAAAAATTGAAAATTGTTCATTTTCAATTCTCCATTTTTTACTACATGCCACGAGCCACGTGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTATCCTACCTTTGAGGAATGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 1467208-1465439 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP019551.1 Athalassotoga saccharophila strain NAS-01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1467207 30 100.0 35 .............................. GCGAAACGTATGCAATCTATTGCGAAGGACTGACA 1467142 30 100.0 38 .............................. GGTATATGCAAAAAGATATTTTTTGAAATCGCTTCGAG 1467074 30 100.0 37 .............................. TACAATTTACCATCAAATCCTAAATAAACTATACTAA 1467007 30 100.0 39 .............................. TATAGTATTTATAACGCTTTTCGTTGGTTAGAGTTTAGT 1466938 30 100.0 40 .............................. TTGGAGCAATGGAGTGAATACTCCAGCCGGAATTGCATTA 1466868 30 100.0 36 .............................. AGCCGAGAGTTCACTTCTTCGCCCTCCCAGAGAACG 1466802 30 100.0 36 .............................. GCATAAAACAACGAAGGGAGGCAAGGGATAACAACA 1466736 30 100.0 38 .............................. TTGCATATGTAGAACGTGAAGAGGTGTCAAATTATCTT 1466668 30 100.0 36 .............................. TTTTATATTATCACCTCTTTCAGTACTTACAATATT 1466602 30 100.0 37 .............................. AGCATACTCACTCCGCTTAACGTTGTCAAGGGTAAAC 1466535 30 100.0 37 .............................. TGATATGACACAAGCCGACGCTATCGATAAACTTTTT 1466468 30 100.0 35 .............................. ACGGATGCAATAAACAAGTTGACGGCGAAATATGA 1466403 30 100.0 36 .............................. CAGCAATGGGAAGAGATACACAAGGCCAAGATTGTT 1466337 30 100.0 38 .............................. GTACAAACCTCTCATGTTTTCGTAATTAAATTTTCTCT 1466269 30 100.0 37 .............................. AGAGGCGCAAATGTACGAGCAGACTGAGACTGCTTTA 1466202 30 100.0 37 .............................. TGGAATACCAGTCATATGCGCTTTTTCCAGCCCAGTT 1466135 30 100.0 35 .............................. CTATCTCGTTCACCAGTTTCATTATTTATAAAATC 1466070 30 100.0 39 .............................. TTTACATAAAATCTCCAACCCCAACCCCCTCGATGCTTG 1466001 30 100.0 34 .............................. CTAACAATTTCGTATAAACCGCCGGCATATATGC 1465937 30 100.0 37 .............................. AAACTCCGCGACGCCTAAGTAAAAGTACAAAGATTCG 1465870 30 100.0 38 .............................. TGAACATGCCTGTTTCTACCATCAGCGTGGAGGATATG 1465802 30 100.0 37 .............................. TAAAACACAATTAGAGACCTTAAAAAATCAATGTAAT 1465735 30 100.0 35 .............................. ACCGATGACGTCGAAGATGCTGTTGAATTTTTGTG 1465670 30 100.0 37 .............................. TGATATTGTTCTAAATTTCCGAACGCAAAACCATCGT 1465603 30 100.0 36 .............................. ACAATAGGTTGCAAATAAAACCTTGGAATTTTTAAT 1465537 30 100.0 39 .............................. CTGACAAGCGTTAATTCAGGTGTTTCACCTGATGTTCGT 1465468 30 86.7 0 .........................T.TTG | ========== ====== ====== ====== ============================== ======================================== ================== 27 30 99.5 37 GTTTCTATCCTACCTTTGAGGAATGAAAAC # Left flank : TTCTCACCGAACTTCCCTGTTAAAACCTGTTTCAGAATTATTCTATCACAAAAGAAATGACCGATCAAGTAAATTGCCAAAATATCTGATCTGGCATGTTACAACACAGGTGAATGACCTCTCATATTTTACCATTGGATTGCGAGTATATACCCTTTTACGTTAAATTTAGCCTCTTTTCCCCACCTCTTTTGTTACACACCCGACCATTAACATTCAATCACATAAGAACTCATATTAATTATCTCCAATAATTAAATATATTTACATATATCCACAGATCATTTCCATCGCCTCCTTTTCTCTTAACATCATTCATACTTCATTTACCATCGTCGTCGACCTACGATACTCGAAAAACCCCCGGAGATCGACGACGATCGGATTTCTTACATAAATAATTATCACTAAAGCTTTTATCTCACTTTTATGTATACAAGTTCACATACTTTTTCCCAAAATTGACTTTTAGAAATCCTTATGTTATACTATGTCAACGA # Right flank : GCGCATGGCTTATAGCCAATGGAGCCAGTGAGCAGTGAATGGAATAATTGATAATTGCAAATTAAAAATTGAAAATTGTCCATTTTCAATTCTCAATTTTATTCTACGTGCCACGAGCCACATGCTACGTGCCTTCTGAGTTAATTATTCCTTACTTATTTGATGCAATTTCATTTAAAGTACAGTATTGGATAAAAAATGCTTATTTTATTTGAAATTACTTTCGCATATTTTTTTTGATATCCTTGAAATGTATCAATTCTGTTTTTTTATCTTAATTAATCAGGAGGAGGCAAGACGGTATGAAAAGGCTTTTGGTAGTGCTTGCGGTCATTTCGGTGGTGTTTTTTTCCATTGGAATGGCTCAAAACGTTGTTAATCCCGATACTATAGTTGAAGAAACTATAGGGCCCATCGATTCAATCGATCCAGCGTGGGCTTATGATACGGCATCGGGAGAGGTTATATGGCAACTATATGACAATCTTGTTCAGTACGAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTATCCTACCTTTGAGGAATGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 1522389-1521761 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP019551.1 Athalassotoga saccharophila strain NAS-01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1522388 30 96.7 38 ....A......................... AAAAATAAAATAAAAGAATATGAAGAACATGAACAATC 1522320 30 96.7 38 ....A......................... CAAAATGAAAATAAAGCACTACGCCAAACATACGCGCA 1522252 30 96.7 36 ....A......................... CTACCAATCTGATCGTCCCACACATATTCAAACATG 1522186 30 96.7 34 ....A......................... TATCTATTCCTACGATATGTCTGTCTCTTTGCGT 1522122 30 100.0 35 .............................. CTAAACATTATATACACCTCCACATGTGATTTAAG 1522057 30 100.0 36 .............................. GTGGCTAAAAAACCTCTTTAACGATTTCATTCACCT 1521991 30 100.0 37 .............................. TCGAATTTCACAAACCCTTTTTCTTTACTATACATAC 1521924 30 100.0 39 .............................. GGATACGTGGCATTGAGCCACTCTTTATATTCAGCAACC 1521855 30 100.0 35 .............................. CACTTCAAGAATGGGATAATAAAACAGAAAGTGTA 1521790 30 86.7 0 ..........................GTTG | ========== ====== ====== ====== ============================== ======================================= ================== 10 30 97.3 37 GTTTCTATCCTACCTTTGAGGAATGAAAAC # Left flank : TGATAATTGCAAATTAAAAATTGAAAATTGTCCATTTTCAATTCTCAATTTTATTCTACGTGCCACCCGCTACCCGCCAATTATTTTGATCTGGTATGTTACAGCATAGGTGAATAACCTCTCATATTTTACCATTGAATTGCGAGTATATACCCTTTTACGTTAAATTCAGCTTCTTTTCCCCACCTCTTTTGTTACACACCCGACCCTTAACATTCAATCACATAAGAACTCATATTAATTATCTCCAATAATCAAATATATTTACATATATCCACAGATCATTTCCATCGCCTCCTTTTCTCTTAACATCATTCATACTTCATTTACCATCGTCGTCGACCTACGATACTCGAAAAACCCCCGGAGATCGACGACGATCGGATTTCTTACATAAATAATTATCACTAAAGCTTTTATCTCACTTTTATGTATACAAGTTCACATACTTTTTCCCAAAATTGACTTTTAGAAATCCTTATGTTATACTATGTCAACGG # Right flank : GCGCATGGCCTATGGCCAATGGCTCCAGTGAGCAGTGAGTGGAACTAATTGATAATTGCAAATTGAAAATTGTCCATTTTCAATTCTCAATTTTTTACTACGTGCCACGAACTACGTGCTACGTGCTTAATTCGGTGCATGGCTTATGGCCAATGGCTCCAGTGAGCAGTGAATGGGACTAATTGATAATTGCAAATTAAAAATTGAAAATTGTCCATTTTCAATTCTCAATTTTTTACTACGTGCCACGAACTACGTGCTACGTGCTTAATTCGGTGCATGGCCTATGGCCAATGGCACCGGTGAACAGTGAGTGGAACTAATTGATAATTGCAAATTAAAAATTGAAAATTGTTCATTTTCAATTCTCAATTTTATTCTACGTGCCACCCGCTACCTGCCACGCGCCACATGCTAATTAGGCCAGTAGTGCATTTTTTTCCTATGAATTGCAGGATGTTTAGAATAGGAAGTTTTTAAATCGCTTATCCATTTTGCGG # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTATCCTACCTTTGAGGAATGAAAAC # Alternate repeat : GTTTATATCCTACCTTTGAGGAATGAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 4 1536234-1535605 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP019551.1 Athalassotoga saccharophila strain NAS-01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1536233 30 100.0 39 .............................. AAGTTTCTCATCCAAGCCCTCTCTTCTGGGAGAGCAAGG 1536164 30 100.0 38 .............................. ACAAACTTAACTCGAATTATGTGTCACATACAACTATT 1536096 30 100.0 35 .............................. TTAGCTATAAATTTATCTTGTGTTGCCAATGTAAG 1536031 30 100.0 35 .............................. TTATATGTGACAGTTAGCATCTATATCATATGATA 1535966 30 100.0 37 .............................. TATTCCGTGTCCATTTCTCCCCCATATAAGCGGGGAA 1535899 30 100.0 36 .............................. GCATCGCCCACGTAACGAAATCATTTATCATTTTAC 1535833 30 100.0 36 .............................. TATGACCTACCATTATTCAATCCTGATACATTTTCT 1535767 30 100.0 37 .............................. ACAGATATATTCGATCTGAACGCTAAAGATGATAATC 1535700 30 100.0 36 .............................. AAAAGACGTTGTCGCAATAAGACTCTTTTAGATCAA 1535634 30 86.7 0 ..........................GTTG | ========== ====== ====== ====== ============================== ======================================= ================== 10 30 98.7 37 GTTTCTATCCTACCTTTGAGGAATGAAAAC # Left flank : ATTTTTTAAATTAAAAACAAAAGATCTTTTCGATAAAGAAGTAATAGGCACGGAGAAAAATCCTCTCGCAAACGGTACGTCTTACACGATCTGATATGTTACAACGCAGGTGAATGACCTCTCATATTTTACCATTGGATTGCGAATATATATTCTTTTGTTCTAAATTCAGCCTCTTTTCTCCACCTCTTTTGTTACACACCCGATCCTTAACATTCAATCACATAAGAACTCATATTAATTATCTCCAATAACCGAATAGATTTGCGTATATTCACAGATCATTTCCATTGCCTCCTTTTCTCTTAACATCATTCATACTTCATTTACCATCGTCGTCGACCTACGATACTCGAAAAACCCCCGGAGATCGACGACGATCGGATTTCTTACATAAATAATTATCACTAAAGCTTTTATCTCACTTTTATGTATACAAGTTCACATACTTTTTCCCAAAATTGACTTTTAGAAATCCTTATGTTATACTATGTCAACGA # Right flank : GCGCATGGCTTATGGCCAATGGTGCTGGTGAGCAGTGAGTGGAACTAATTGATAATTGCAAATTAAAAATTGAAAATTGTCCATTTTCAATTCTCAATTTTATTCTACATGCCACGAGCCACCCGCTACGTGCTCAAGTTGTATCCTACCTTACGCGTCACGAATTTTCTTTAATCGAGGAATGAAAAAGCCGCCTGTTCGGCGGCCTTTTTAATTATTGATGCAAGACATACATCGCTGTTGGTGGAACTTCTATTTCTCCGGATAAAATGTCTATTGTTTTTATTCCTGTATGGTTTTGATCTACCACAAGATCCCATTGACCATCTGGCAATGTGAATTTGACACTTGATGTTTCTCCATTGTAAATGACGATTATATTCTTCCACGTATCACCATTTGGACTTCCGTGAATTTCGTAAGCAACGAATGCTATTGGCATTCTGAGATATTGAGTTACTTGTTTATATTGTGTTGGGAAAAATGTTATAGAAGATTTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTATCCTACCTTTGAGGAATGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 5 1547918-1546397 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP019551.1 Athalassotoga saccharophila strain NAS-01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 1547917 30 96.7 41 ....C......................... AAATAGAAGTGACATAATAACTCGGTACTTCAATTTTTATG 1547846 30 96.7 41 ....C......................... AAATAGAAGTGACATAATAACTCGGTACTTCAATTTTTATG 1547775 30 96.7 40 ....C......................... ATGAAAAGGAGGTGAAATAATATATGTTTAATATAATACC 1547705 30 100.0 38 .............................. TCGGCACCTCACAGTAAAGGTTAGAGGCAATTTTCGGT 1547637 30 100.0 36 .............................. TCTAACACTAAATCGAGCCCAAATGATACTTTGTCA 1547571 30 100.0 35 .............................. ACAGACGAAGAATGGAATGCTTGGCTTAAGTTCTT 1547506 30 100.0 35 .............................. CTGTTTTCTCCTGTATTGCCCCAAGCTCCTTCACC 1547441 30 100.0 38 .............................. CGACTGCAATATTCAGTCCATTTATCGCGACTATCGTC 1547373 30 100.0 43 .............................. AAATGCTACAAAGAAATGATTTGTCATATCATAGGCAAGATAT 1547300 30 100.0 39 .............................. CGGGCTTTTTGAAAAAATAAAAGGCCCCATAAAGGGCCA 1547231 30 100.0 35 .............................. ATAGTGACACCTGCTAATTTCTTAACGACTTCTCT 1547166 30 100.0 37 .............................. TTTCAGAAATTCTTTTAATGCTGCATGCTCTATTTCA 1547099 30 100.0 35 .............................. CTATCTCATCATCCCATACTGGCTTTGGATCTTTG 1547034 30 100.0 39 .............................. AGGAATGAAAACATTAATTTTCTTAATGCTACCTTCTTT 1546965 30 100.0 38 .............................. TCGAAATCTTTATGCTCAAACATGGGTTCATTCCTGTT 1546897 30 100.0 35 .............................. CTATCTCATCATCCCATACTGGCTTTGGATCTTTG 1546832 30 100.0 39 .............................. AGGAATGAAAACATTAATTTTCTTAATGCTACCTTCTTT 1546763 30 100.0 37 .............................. TAGCGATTACTCACCTGGCAATATATGGAGGCATCCA 1546696 30 100.0 39 .............................. GTGGTAGGTTTTACTACCACTATGTTGTACCATGCCATA 1546627 30 100.0 38 .............................. TACAGTCCAATCACCATTTCATATATTTCTCCATCAAA 1546559 30 96.7 35 ....C......................... CACCAATCAATTTGTTTATACTTCATATTATCTCC 1546494 30 96.7 38 ....C......................... ATGTGATACATAATTAGAATTAAGACCCTCAAATCTAT 1546426 30 83.3 0 ....C.....................GTTG | ========== ====== ====== ====== ============================== =========================================== ================== 23 30 98.6 38 GTTTATATCCTACCTTTGAGGAATGAAAAC # Left flank : GGACGTTATTATTTTCATAATTGTAGTTGTTGTAATTTTAATTCTTAAGTCATTGAAAAAGTTCTTTTAGGATTGAATTATCATAGCGATCTGGCATGTTACAACGCAGGTGAATGACCTCTCATATTTTACCATTGGATTGCGAATATATATTCTTTTGTTCTAAATTCAGCCTCTTTTCTCCACCTCTTTTGTTACACACCCGATCCTTAACATTCAATCACATAAGAACTCATATTAATTATCTCCAATAACCGAATAGATTTGCGTATATTCACAGATCATTTCCATTGCCTCCTTTTCTCTTAACATCATTCATACTTCATTTACCATCGTCGTCGACCTACGATACTCGAAAAACCCCCGGAGATCGACGACGATCGGATTTCTTACATAAATAATTATCACTAAAGCTTTTATCTCACTTTTATGTATACAAGTTCACATACTTTTTCCCAAAATTGACTTTTAGAAATCCTTATGTTATACTATGTCAACGA # Right flank : GCGCATGGCCTATGGCCAATGGCTCCAGTGAGCAGTGAGTGGAACTAATTGATAATTGCAAATTGAAAATTGTCCATTTTCAATTCTCCATTTTTACTACATGCCACGAGCCACCCGCTACGTGCTTAATTTACTTCTTTTTTAAAAGCGAAAATAGAAAAAGTGTGATTATAAAATCTGAAGAAATGAAAAAATTAAAAGGAGTAATTCCATGAGTGAAAAAACAGTTTTAGCAGGAAAGATCTTATTAATCGCTTCTCAGACCATTGCCGAAATCAGCTCCTTGTTGCTGACCTGGCCTGAAGAAGAGAAACATGGAAAACAAGTAGAAGAGACCAGAAATGATAAAAAACCTGTTTCGTGAATATTGGAAAGAATTTGGAGACGATCGGATAGAGAAACTCAAACTTATAGTAGAAATTTTGATCTGGTCGCTTCTATAATGTAACATCCCCCGCAGAAACAAGGCTGCGGGGATTTTTCTTAGAAATGTCGTCAAA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATATCCTACCTTTGAGGAATGAAAAC # Alternate repeat : GTTTCTATCCTACCTTTGAGGAATGAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //