Array 1 205535-205762 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWKK01000001.1 Clostridium botulinum strain ZBS3_16-240-01 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 205535 30 100.0 36 .............................. TCCTCCATATCTCACATATCCTTTCTAAAACATTTC 205601 30 100.0 36 .............................. AAAGTAAGTTTACTCTAGGTTGTCGAACTGTTCCCA 205667 30 100.0 36 .............................. TACATTTTCATAAATCCAGTTGCCACTTTATTAACA 205733 30 96.7 0 ......T....................... | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 99.2 36 GTTGAACAATAACATGAGATGTATTTAAAT # Left flank : GCATGGCATCAATTTTATCATAGGCATAGGTTAATCCAATAGTTAAAAAAAGTTCTGCGGTTATATCAGAATGAGTAAGGGTGTAGCGTCTTCCTAAAATAGGTTCTGTATTAGTTACTCCATCTCTAAATTCCACTGAAAGTTTTTCAGGGTTCAATTTGCTCATTTAATCCCTTCCTGTACAATATTTCTCATAGGACTATTATACGATTAGGTTAAGGAAGTTGTCATTTAGGTAGCTATAAAATCTATTATAATATCATTAGCGCTATATAAATTTATAAAAAGAATATTGAAATAAATAAAAGAAAAGAACAAAAACTTTTTCCAATCGACTTTAAGTTGAAAATTTATCGAAATCATTGATATATAAGGGTTTAGGTTAGGTTTTTTATGTAAATTTGAAAATACCCTAATCAGTTGGAAATTTTTATTTATAACCTTGTAAAGTCAATGGTTCTATGATATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : TTCATATTCCCATTCATCTTTGCAATCTTTTCTCTTAGTTGAACATTAATATAGATGAAAAGCCACCCTTAATAATTAAATATATGGGTGGCATAGTTGTATTTAATTTATATACGAAACGATTGTAAATAGTTTTGTATGTCTTCTTCAGAAGTATTGAGCAAATCAGTAAGCATCCTTTGAATAGAGTGCAGGGTTTTAATTCTCTCTTCAATTTCGCAGATTTTATTCTTTACCAATCCTTTTAAATTCTCTCCATCCATTTCTTGGCTGAGCATTTTCAGTATTTCTTTGATTTCTTTTAACGAATATCCTAATGATTTAGCATCTTTGATGAATTTAATTTTCACAAGATAATCATCTGTGTAGATTCGATAACCATTGGCTATCCGCTTTGGGGCAGGCAAGATGCCACTATCTTCATAGTAGCGTATAGTTGATGTACTTATCCCAGTTTGCCTTGCTAGTTCACCGCGTGTCATTTTGTTCACTTATATTAC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 208500-208922 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWKK01000001.1 Clostridium botulinum strain ZBS3_16-240-01 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 208500 30 100.0 35 .............................. CGTTTTTTTGTTGCAGGTTTTATTAAAAGTAATAG 208565 30 100.0 34 .............................. AATTAAAAACAATAAATTTTCATTAAAGGATAGT 208629 30 100.0 37 .............................. GTTTTAAGTCCTCTCGCTTCTTTTCTTGCAGCTCTTG 208696 30 100.0 36 .............................. AACTGGTAATAATCTAAGATTAAGTATAGAAACTAT 208762 30 100.0 36 .............................. TTTCTAAAAGTTTTAGTATTAAACCTTTTTTCTTTT 208828 30 96.7 35 ...G.......................... TTATGATATGATTTTATTTGTTTAAGAGTATCTGC 208893 30 96.7 0 ...G.......................... | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 99.1 36 GTTAAACATTAACATGAGATGTATTTAAAT # Left flank : GAATATTTATGGTGTCAGATATTGTGCGTCCATTATGTAGTTTTTCCAGGTAAATTAAAAAATAAAAGTAATGTAAACTCAATCATATTAGTGGTTTATATAGGATTTTTTATAGAAATTTCTATTTTATAAAATCATCTGGAAAGCTTTCTGGAAAATCTTGATATTTCAATGGGGGTGTGCTATTTTTAATTTTAAGGAATATTGATTTTACAGTGGTTGAACCTTAACATAGGATGTATTTAAGCAGGGAACTCAAATTTACAATTTGGTGTGAGTCACTTACTCCTTGGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGTCGTTGATATATAAGGCTCAGGATAGGTTTTATTTTATATTTATTAAAAAACGTAATCACTTGGAAACCTTTCTATAAAACCTTGCAAAATCAATGGTTGTATGATATTCTTAAAAACAAGGAATGGCTATTTTACTATG # Right flank : TACTATATCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAAGTTCCTTTTAGGTGCAATTCTTTTTGGGTTGTTGACTTGTTAGTCTAAAGCTACACCATAAGAAGGTTCATTAACACATGTGGAAGAACAGGTAATAGATACAGCGCTTGCTATTGATATGGTGAATTGTATTACAAATAACGAAGGTTTTATTTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTTCTAAGTTGTATCATAACCTAAGTAAATTATAAGAATATATGGTTATATTTATTTTAAGACTATTGTATTAATATGATTCATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGACGTCTTAGATTTTTTATTGCATGAGATTGTACGGAAAATATTAATTTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACTTACAATGATAAAGTAGGTCCTGATTTTTATTAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACATTAACATGAGATGTATTTAAAT # Alternate repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 213560-213937 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWKK01000001.1 Clostridium botulinum strain ZBS3_16-240-01 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================================================================================== ================== 213560 28 100.0 39 ............................ ATATAAATAAGTACTTGGGTTTATCTTCTTTTTTTGTAT 213627 28 100.0 38 ............................ ATTAATCTATGAAATAAGCTATTATGTTATTTATTAAT 213693 28 100.0 39 ............................ ATATGTAGTTTTCCAATTCTTTTAATGATTTTGATCTAT 213760 28 96.4 122 ................G........... GCAGGGCCCCAAGTCTTTGATTTGGTGTGAATCGATTACTACTTGGAGATCAGGAGTAGGAGTAGGAGTTTCATAAAAAATTAAAGATTTATAGTTTTTAAAGTTAAGTATGATCTTCAAGT 213910 27 75.0 0 T.........-.TT....T.A..G.... | C [213927] ========== ====== ====== ====== ============================ ========================================================================================================================== ================== 5 28 94.3 60 GTTGAACATTAACATAAGATGTATTTAA # Left flank : GGACCTGGGATAATCAAGGAAACGTTGAGGATGTTGCAACAGGAAGTGCAGCTGGACCATTAGGTGCATATTTATATAAGCATAATATTTTTAATGTAGGTCATGAGATTATAATAAATCAAGGAAGATTTGTCGGCAGACCTAGTAAAATTAAGGTTTCTATGAGCATTTCTGAAAAAGAAATATTAGTGTCTGGAGAGGTAGCTATTTTGGCAAAGGGAACTATTTTACTATAATAATAAACGTAAAAAATCGCATTATTCAAGAAATTGAATTTGCGATTTTTTATTGCGCAATCCAAATATATTGTAAAGTTAACTGAATTTTTTCAGCCAAAATAAATTTTAAAACCTATTTAGAGCGTTGACACATAAGGCTTATGGTAAGTTTTTATTTTATATTTGTAAAAAGCAAAACTACTTGGAAAAATTTCTTTAAAATCTTGTAAAATCAATGGTTGTATGATATCCTTGAAATTAAAGAATGGCTATTTTACTATG # Right flank : AATTTGTGGTTAAAGAGAACTCTTATTCCTTTAAGTATAGGATTAGGAGTTTTTTATTTTAATCTTAATTTAATTTAATTATAGTTTTGCCATATATTAAAGATACATTGAAAGTAAGTTAAGTTTTTTATCTGTATCTTCTTTATATGTTTAAATACATTATTCTATGGTAATATAATAGGATAAGGAGAGTGAAAGTTATATGAAAAAGAGATTTAATGTAACTGGAACCTGTATACCAGAGAAGCATTATATGGTAGATATATCTAAAAAGCTAGATAGCATATTAAAATTAATAGATAATGAAGAGTATTTTATTATAAATAGACCAAGACAGTATGGAAAAACAACTACATTATATATGTTAGAAAAAAGATTAAATAAAATGGAAGAGTATTTACCTATAAAAATAAGTTTTGAAGCCATAGATACGGAAGGATATAGTGAGGCTAAAAAATTTTTAAGTAGCATAATGATGCAAATAATAAATTACTTTAGAT # Questionable array : NO Score: 3.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-2.46, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 235262-235776 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWKK01000001.1 Clostridium botulinum strain ZBS3_16-240-01 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================== ================== 235262 30 100.0 37 .............................. AAATTAAACTTCTAATCTCAACTTCTATAATTATTAT 235329 30 100.0 36 .............................. TTTAAATTTGTACCTACTTGTCCATTGGTGTAAGGT 235395 30 100.0 37 .............................. TGTTGCATCTAAAGGTGTTGTAACTGCAAATGTTAAG 235462 30 100.0 34 .............................. TCCGCAATAGAAATGTTGGAAGAAATGGGCATAA 235526 30 100.0 36 .............................. AGATTTAGCCCTAATATGACTAGAACACCAGAAGGT 235592 30 96.7 37 ................G............. ATAGAATAGTACACCAATATTTCGATGATTGGGATAA 235659 30 93.3 58 ......C............G.......... TGTATTAAAAAAGATAAAATATTTAGCAAAAACATGGTGGTATACTTGAAGTGCTAGA 235747 30 73.3 0 ...T.TG.A..TA..C............G. | ========== ====== ====== ====== ============================== ========================================================== ================== 8 30 95.4 39 GTTGAATAGTAACATGAGATGTATTTAAAT # Left flank : GCTTGGGACAGGTTTGTTTTAGATATTTATTAAAAAACGTAATCACTTAGAAAAATTTTTTTCAAACCTTGTAAAATCAATGGGTGTATGATATTCTCAAAAATAAGAAATGGCTATTTTGCTATGGTTGAACAGTAACATAGGATGTATTTAAATTACCTGAAGCTTCTGTATAATTTCTTTTCACTACGTTGAACAATAACATGAGATGTATTTAAGCAGGGAACCCAAATCTCTAATTTGTCGTGAGTCGCTTACTCCTTCGAAAATGATATAAGGAGTTTCATTAATGAGCATAATGTATATCTTATATTTAATTAAATTTTTCCAAGTGAATTTAAAATTCAAACCTATTCTAGCCATTGGTATATAAGGCTTAGAATAGGTTTTTGTTATGTGTTTATTAAAAAACGTAATTACTTGGAAAACTTTCTATAAAACCTTGTAAAATCAATGGATATATGCTATTCTTAGAACTAAGGAATGGCTATTTTACTATG # Right flank : TGAATTATTGATTATAATAAAAAATAAAAATAGGAGTATTTAAATTTTTACATTTGTAGTGTTGCAAAGTACATTGTTTTTATAACATGCATTGAGATTTCTAATATATAATAATTAGGATTTTTAAACGTTAAGATTTATTTAACTAATAAAACCTGTATATTGTTTATTGTAAGTAAAACCGTAACATCAATATGTATTTAAATTTGCAATTATAAAATAAATATATACAGGTTTTCAAAAAAATACAAAAAGGTATTGTAGTATAATCTGATTACTATTATAATTTTATTAAAGAAATAAATAACGTCATTGCAATTATAAAATAATTATAATAAATAATAAGATATTAACTAACAAAAGAAAATAAAAAAGAGGTGATAATAGGAGGGTGAAAAACTATGCTAAGAAATCCAAAACAAGAATTACAACAAGTAGTTAAGTTTGCTAAGAAAGGAGATAAAAAGGCTAAAGAAAATATATTGATGAGATTTAAACCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATAGTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 5 248521-249204 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWKK01000001.1 Clostridium botulinum strain ZBS3_16-240-01 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 248521 30 100.0 35 .............................. TGCTTTACTATTAATCCAAATTTTTCACTTGCTTT 248586 30 100.0 36 .............................. TGTTTTGATAAAGGTTTTAATAACTTTTCTTCTAAG 248652 30 100.0 35 .............................. ATTAATTTAAAACATAAAAACTAAGCAAATAATCT 248717 30 100.0 36 .............................. CAGTTTATATTAAGAATTTTGTCTTTAGGAATAACA 248783 30 100.0 37 .............................. TATCAGTTCCTGATGTTTGCTCTGCATATTCTACAAA 248850 30 100.0 34 .............................. CAAAGGTAGGAAGGCCTTTAAAATATGAAACACC 248914 30 100.0 37 .............................. TAACTAATAGTATCTTCTGTTTGAAATTGAGTATAAG 248981 30 100.0 35 .............................. GGAATATTAAACTGAATCCAATTATCTAAATTTGA 249046 30 100.0 35 .............................. CCAATATTATTCGGTGAGGATGTTATTTTAAATGA 249111 30 100.0 34 .............................. GAAGAAATGAAACAAGCGGCCATAAGTGCTTTAG 249175 30 86.7 0 ........A......G............GC | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 98.8 36 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : ATAGGAAGTTATCGTTTGTTTGGAATAAAGTTTACAAGTTGAACATTAACATGAGATGTATTTAAGTAGCGAACTGTGAGTCACTTACTCCTTGGAGGCAACGAGAAGGAGTTTCATTGAGTGATTAGACATTTAGTATTTTAAGTTTAGGCATGATATGAGCCCAATAAAATAATAATTTAAAAAATGAAAAATATGATTTATAAATTTATTAGCTTAAAGCAGCTATTCTTAATGAAATGGATGCTTTTTTTAATTGAGCTTTGTATAAATACAAATAAATCTAATTTTAGTGATTAATCAGTCTGATTATAAGTAAAATGTTTTTCCAACCACATTTAATTTTAAAATATATCTTAACCCTTGAAATATAAGGCTTAAGGTATGCTTTATTAAAATTTTATAAAAAATGAGAAACGGTTGGGAAATTTTCTTTAAAACCTTGTAAAATCAATAGTCATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : CAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGGAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTGCTATGGTTGAACCTTAACATAGGATGTATTTAAATATATATTTTTCACCCAAATTCTCAGATTCAGCTTGTAGTTGAACCTTAACATAGGATGTATTTAAATTCTATCTCTTTTCGTGTGTCTTTAAATTTTATATCGTTGAACCTTAACATAGGATGTATTTAAATCATAGATAATATGATTTACCTTCTTTTATTTCTCCATGTTGAACCTTAACATAGGATGTATTTAAATTAAGGTCTATGCGTTTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 6 249458-249946 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWKK01000001.1 Clostridium botulinum strain ZBS3_16-240-01 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 249458 30 100.0 37 .............................. ATATATTTTTCACCCAAATTCTCAGATTCAGCTTGTA 249525 30 100.0 35 .............................. TCTATCTCTTTTCGTGTGTCTTTAAATTTTATATC 249590 30 100.0 37 .............................. CATAGATAATATGATTTACCTTCTTTTATTTCTCCAT 249657 30 100.0 35 .............................. TAAGGTCTATGCGTTTCTATTGTTGAACAATTTAA 249722 30 100.0 35 .............................. GAAGAAGAAAGTGAAAAAATTATTTATGATATGGA 249787 30 100.0 35 .............................. TGATCTACCGTCATTTGCATTTTAGAAACTAATCC 249852 30 100.0 35 .............................. ACAACCTAGCATAATGGGCTTTGGTGGGTTTGATG 249917 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 99.2 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : TTCTGTTTGAAATTGAGTATAAGGTTGAACAGTAACATAAGATGTATTTAAATGGAATATTAAACTGAATCCAATTATCTAAATTTGAGTTGAACAGTAACATAAGATGTATTTAAATCCAATATTATTCGGTGAGGATGTTATTTTAAATGAGTTGAACAGTAACATAAGATGTATTTAAATGAAGAAATGAAACAAGCGGCCATAAGTGCTTTAGGTTGAACAATAACATGAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGGAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : CAGAGAACCCAAATCTATGATTTGGTGTGAATCGCTTACTCTTTAGAGAATGGCATAGGGATTTTTATAAAACTAAACTATGCATTGTGATAACTTCTATATAAATTATTAGATAAAGGGGGATTTTATGAAAAATAAAGTTACTAATAATTTAAATTTTGTTGCAGCAATATTGCTTGGAATTGTGGCTATGTTAAATTTTTTTCAGCATAAAACATTGCTGGGGATTACATATATCTGTTCAGCAATATGTTTTTGTACACTTGAATTTTCAAAAAAGAAAAATGCAAATCATAAATAAATTTAATTTTAAAAACCTGTCTATTTTTAGGTCAGGTTTTTAGTATTTAAAGGGATTAGATAAAATAATTTTTTGTAGTTATGCAGATATTGTATATTATTTTATATTTTTGAAGGATTATCCATAACTCTGTAGAAGAATATTTGTGTAGGAAATATATTATAAAAATATGGAGGGAGTATTGTGGATAAATTTCGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //