Array 1 88265-88395 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJDE01000019.1 Saccharibacillus sp. O23 O23_contig_19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =============================== ================== 88265 23 100.0 31 ....................... GGTAATCGACGAACCGTCATTTGTTGAAATT 88319 23 100.0 31 ....................... AACAAATGACGAACCGTCGATTACTGAAACA 88373 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= =============================== ================== 3 23 100.0 36 GTCGAACGCGTAAGCGCGACTTC # Left flank : CTGCCTTTTCTGCCGGAACCGATCGTCTGGCACGGCGTCGAACTGGGCTGGGGCCAGTTGATCGCCTGCATCATCTTCATCATCGCTTCGTGCACCGACGGGATCGACGGCTATATCGCGCGCAGCCGCAACCTCGTGACCAATCTGGGCAAACTGCTGGACCCGCTCGCCGACAAATTGCTCGTATCCGCGGCGTTCATCTCGCTCGTGCAAATGGATAAGCTCGCCGCGTGGATGGCGATCGTGATCATCAGCCGCGAGTTCGCCGTTACCGGCCTGCGCCAGATCGCGCTGCTCGACGGAGCCGTCATGGCCGCCGGAGCCGGAGGCAAGATCAAGACCGTGCTTCAGATCGTGGCGATCGCTCTGCTGCTGCTGAACAACCTGCCGTTCGAGATCTGGAACTTCCCCGCCGATACGATCTTCGTATGGGCAGCCGTGATCGTTACCGTTTATTCCGGAGTCGATTACTTTGTTCGTAACCGTCGATTACTGAAACA # Right flank : CAGTAATCGACGAACCGTCATTTGCCGAAACAGTCGAACGTCTAATTTCACCTACTCTCAAACCATTGGAGCGTGACGCATCGTGAAAGCCGAAATCATTGCCGTAGGAACCGAACTTTTGCTGGGTCAAATCGTAAACACGAACGCGCAGTATCTCTCGCGAGAGCTGGCGGCGCTCGGGATCGACGTTTATTTTCAAACCGTGGTCGGAGACAACAAAGACCGGCTCAAGCAGGCGATCGAATTGGCGAAAAGCCGGGCCGACGTGCTGGTATTCTCCGGCGGCATCGGACCGACCCAAGACGATCTGACCAAAGACGCGATCGCCGAGGTGCTGGGCCGCGAGCTGCGTACCGACCGGCCGGCGATGGACAAAATCACGGAATTTTTCGCGGACCGCGGCGTTGCCATGACCGAAAACAACAAACGTCAAGCTCTGGTCATCGACGGCTGTACGCCGCTTCCGAATTCGACCGGGCTGGCGGTGGGCGTGGCGATCA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACGCGTAAGCGCGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 1 28962-29527 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJDE01000024.1 Saccharibacillus sp. O23 O23_contig_24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 28962 32 100.0 36 ................................ ACAGGAACTTTTGACGATCCGGATCAAGGCGGGGAA 29030 32 100.0 34 ................................ GTCGAAGACGTTGCTGTAAATTCGACTTTGCCGA 29096 32 100.0 34 ................................ GTAAACCGAAAAAGCGACACAATTTTGTGGGCCG 29162 32 100.0 35 ................................ CAGTCTTTTGATGTGGGATCGCATCGCTGGTGTTT 29229 32 100.0 38 ................................ CACTCGACGTTCTAAGGCCAGATAACCCGTGCGCATTT 29299 32 93.8 33 .......C...C.................... ATAATTAATGAGCGTCTTTCGGTCTGTACCCAA 29364 32 93.8 34 .......C...C.................... CTGGGCATTTACGGATCCTGGATCCTGCTCGTCC 29430 32 96.9 34 .......C........................ AGATCGAGGCGTCAGGGATTCAGAGTACCGACAA 29496 32 93.8 0 .......C..A..................... | ========== ====== ====== ====== ================================ ====================================== ================== 9 32 97.6 35 GTCGCTCTCCGTGCGGGAGCGTGGATTGAAAC # Left flank : GCTGCGGAGGCGGGGAAGGCGGGCGGAGCGCCGAGTGCGGAGGCGGATAGAGCGAACAAGCGGGAGGAGTCGGCGGGTTCGCTGCCGCGGAGCGGACTGCCGGGCGGATCAAGCCCGGCGGGGAATTCCGGCGCGGACTCAAGCGACAGCCGAGCGAAAGCCGGAGGTCTTAGCCCGGCCGCCGGAGCCGGCATCGGCTTGTCGATCGTGGATCTGATGATCCGCGAGATGGGGATGAGCTGGAGCATCGACAGCGGAGAGACCGGAACGGTCATCACGATTCGGCCGCCCGGCGAGTGACACGCCTAACCTAAGTGCTGAGCGAAGAAAAAGTGCGAACCCCAAGCTCCCATGTAATCCCCGGGAGGTTCGCACCCCGCGCCGCATCAGGGTTTATGGGATTTTGGTTGCGTTTTTGTCCGGTTTTCGATAGGCTGATTTCGAGGTTCGCACTTTTGATGTTTGCAGCCCTTATGTGGTAAGGGCTGAGAGGGTGAACA # Right flank : CGGTGATTACGGTGTTCAGGCGGTCTATTTCCTCAAGTCGCCCCCACGCAGGAGCGTCCAACACCACCCCAACACCCCCTAACGGAACACCAATCCGTTACAGCCCGTTTTCAGGGCTGTTTTTATTTTTAACGGAACGTATAACCGTTAGCCGTCTCCGAAAGGCCGAAAAGCCGGATGAAAGTGCGCTTTTCTCGTTCTAAGCGTCAGCTCGTTCCGTTAGCGTGCCCATGCGGCGGGAATATTCGTTCTAAGCGTCGCCTCGTTCCGTTAGAGCGAGAAGCAAGCGGATCGACAGCGATTCGGTCCGGCGAACGTATCGGAGCGGGTTGCCTGGCCGACGTTTTTTCGGAAATATAAAGACATGGATCGGCAATCCGACCCGCTCATCGACCGATCGTCAAATCCGCATAGATTCGGACCGCGTTCGAGCCGGCGTCCGGCGCTTCGACCGCTTTGAACGCTTCGAACAGCCGAAACGACTCTTTGGAGTCGGCTTC # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCGTGCGGGAGCGTGGATTGAAAC # Alternate repeat : GTCGCTCCCCGCGCGGGAGCGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 101366-101070 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJDE01000033.1 Saccharibacillus sp. O23 O23_contig_33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 101365 32 100.0 33 ................................ AACCTTTTCGGCCGCAACTTCTTCGTCCGTCTT 101300 32 100.0 35 ................................ GATGTACAGCGGGACGATCGGATCCGGTAAGTCTT 101233 32 100.0 34 ................................ ATGGACGAGTGCTTGTTTTTCGCGAACCGGACTT 101167 32 96.9 34 ........C....................... TGCGCCCGTATGGGCTTTTTGCCTTTTTTCATGG 101101 32 71.9 0 .C....T.C.C.....C.A.A..C...A.... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 93.8 34 GTCGCTCCACGTGCGGGAGCGTGGATTGAAAC # Left flank : GCGGAAAATCAGCATAATCAAGAACGGAAGCAGCCCGGTATGCGGGCTGCTTTTTGGTGTTTTTTCCGGCTGCATTGACAAAAAAGCAACGTAGAGTCGCGATTTTTTGTTTTGCAAGAGTTACGTTGACAATAAAGCAACGTAGAAGCGGAAACGAGGCGGAGTTCGGATGAAAAAGCATTCTACATTGCCTTTTAGGACATGTAAGCCATTCAACAAGCTGAAATATAGGCTCTACGTTGACAGAAAGGCAATGTAAGATGCGGGAACGGGTCGAAATGCGGAAAGTGGTTTGCTAATCAGACTTTGCGGACGATCGAAGTTTTCCGAAAGTGCGAACGTGAAGCTCCCAACGAATCCTAGGGAGGTTCGCACTCCGCGCCGCATAAGGGATTTCGCGATTTTTCTTGTGTTTTTGTCCGGTTTTGATTAGGCTGTTTTTGAGGTTCGCACTTTTCTCGCTTTTGTCCCTTGCGAGGCAACGGTTGAAGAGGGGAACA # Right flank : CGCGCGACGGTGTTGAATGAGTTAAGCGAACCGCGACCCGTTTAACGCGGGCTCGTCATATCGCCTCTGCTTGTGCTTCTCTGTGCCCTAAGCCCTTCGTGCCCATTCCGTTCACCGCACTAACGCGGCAGAAAAATAACGGTTGACACGTCATGTCAAGCCCGGTATATTGGTTGAAAAATCGTTGGACCCGGCAGGAAAGTGTTTCCGAGGCGTCTTGCAAGCGAAGGCGTCTTTTTTGCGTGAGGACCGGAAATGGAGAGGTTATGGAGCAGGAACAGACAGGGGATTTTCAGCGAAAAATGCAGGTTCGGCATGTCGTCATGCTGTCGCTGGGCGGGGTCATCGGGACGGGATTGTTCCTGAGTTCCGGTTATACGATTCAGCAGGCGGGGCCGATCGGCACGATTCTGTCGTACGCGGTCGGCGCGATCGCCGTCTATCTCGTGATGCTGTGCCTCGGCGAATTGTCGGTGCAGATGCCGGAGACGGGCGCTTTT # Questionable array : NO Score: 8.75 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCACGTGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.10,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //