Array 1 33365-32093 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAALMS010000007.1 Clostridium perfringens strain CP-21 7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 33364 29 100.0 37 ............................. AGTTTGGAAGAGAAGATGGCACAGTAGGAACAGGAGC 33298 29 100.0 36 ............................. CAAATAAAACGAAAATCTACAAATCTAAAAACGTAA 33233 29 100.0 35 ............................. AAAATTCCATCGAACGGTTTACTATCAGTACCATC 33169 29 100.0 37 ............................. TTGGGAACTAACTATATAGAAGATTTCACATATCTTT 33103 29 100.0 36 ............................. TATTTTTTGGGTGGTATGGTGGTATCTAAGAAAAAT 33038 29 100.0 37 ............................. CGACAAAGAATAACTTTATAACGAGCATAACTAAGTG 32972 29 100.0 36 ............................. GTGTTTTCGCATGGGATGAGGTTCAAAATGAATTTA 32907 29 100.0 37 ............................. ACTACATACATATATAGCAATGGGATTATCCACTATG 32841 29 100.0 37 ............................. AAAGTTTCTGTAACAGTTAATAATCCATTTTGAATCC 32775 29 100.0 36 ............................. ATGATATTATCTCATCATTTTGGTTATTATGGATTA 32710 29 100.0 36 ............................. ATATTTTGTTGAATCTTTTGGATCAGGTTGAAGATA 32645 29 100.0 37 ............................. CTTATAGCTAATGCTAATAAGTTGAAGGCTCCGACTA 32579 29 100.0 36 ............................. CACAATGGGATTGATATTGCAACACCAACTGGTACA 32514 29 100.0 36 ............................. ATTGTTTTTATATAGTTATAATAATAACGTGAATTA 32449 29 100.0 37 ............................. ATGGAATATATAGAAAGACTTTCAAATGGAGAATTGC 32383 29 100.0 37 ............................. AGATTTGACTTTTGATGATGAATTAAATTATATGCAA 32317 29 96.6 36 .......A..................... CTAGAAAAACCACCGTTACCACTTACCAACAATTTA 32252 29 96.6 36 .......A..................... TGATATTCTAAAGCTTGATTACTTTTAAGTCCATTT 32187 29 96.6 37 .......A..................... TCATCTGATAAAACTCTTAAAATAATATATTGATTAC 32121 29 79.3 0 .......A....T.....T.GG......A | ========== ====== ====== ====== ============================= ===================================== ================== 20 29 98.5 36 GTTTTATCTTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTGGGATTTACTAGAAACACCAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGAAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAAGAGAGAATGAGGCTATTACTAGCTTTTAGCATTTTAAAATTTGGG # Right flank : AAATAAAAAAAGCATCTTAAAAAGATACCTTTAAACTTAGAATTTTTTGTTTCAATAGCAAGTGAACCTAATGCAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAATATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATGAGTAATTTAAGTTCTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTAATATATACTTATTAAATTAAATTTAGAACTTTAAATCTAATAATCTATGCATTTAGCAGTTTACATCTAATAGCTCCCTTGAAATTTCCTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCATTA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //