Array 1 50030-49757 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXQ01000009.1 Acetobacter indonesiensis strain NBRC 16471 sequence09, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 50029 29 100.0 32 ............................. CTGCACGGAGAGGTTGCGTTAATCGGGGGTGG 49968 29 100.0 32 ............................. TGCTGTCTGCCTCAATCTCGATGCTGGCCAGA 49907 29 100.0 32 ............................. AACTTAATTGTTCATCCCCGGCCCATTTCATC 49846 29 100.0 32 ............................. CGCGGGCGCGTTACTGTGACGGCGGCGTCTAT 49785 29 82.8 0 ..............T........A..GAA | ========== ====== ====== ====== ============================= ================================ ================== 5 29 96.6 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGTCGCTACTGCTCATCCCGATAAGGGAGATCTGGGCGTTGTGCGCGGTGCGGGAATCAAAATATCCACACCCGGTTAATCCGATTACGGGCAGCATCAGGGCAAAAGCCAGTTTCTGTCTTTGCGCGGCACGGCGTACAGAAACACGAAGCACCACAGAAGCAGCACGGGTCACAAAAGGAGCGGTCATGGAGGGCAGGGAAATCCGATTATAAAGAAAGAACACCACAGAAAATACAGAACTGCATAACACAGCCAGCCTGACAGCCAGTATGCCCAGCTACCGCCCGGTGTTTATCTGGCCACGAGTGTAGCATTTTATACCGATAAGGGAATGTCACAGCCACAAAAAGCATCAGCGCATGTGCTGCCAAGCTCCGATTTTTAGCGGATGCGCCCTCTTTCCCCATACGGCGGAAAAGGCTAAAAAAGAGCACAGAAATGCTGGTAGACTCTTTGACAACAAAATAACCCTGTAAAATCAAACTCTTCCAGGAAGA # Right flank : ACCCAGCTAGTATGTGTGGGCTCTTGCTGGTGGGGCGTATCTGCCGCACTCTATGGGCACTTTTTGTGTGTAAGGAGCGTGTTATGGTGGCATTTCGTCCAGTTTTTAAGGCTGTGGCTTCTCTTGCTTTTATGGGGGGAATCACATTGGCGGCTTTTCCAATGCCACAGCAGGCGCTTGCGGCAACAATTTTGAAAGTGCCGGCCGTGCCTGCCCCCATGACTGCCAGCACCGCTGCTCCGGGTGTGCTGGATTATGACGGTATCCCGACTGTTGAGCACGCATCCGCCGCCAATGTGGCTGGCCTTATGTCATACTGTTACAGCCATAAACTGGTGACAGATACGACTGTGCGCTCATTAGGGCGTAAATTGGCTAGCCGCGAGGGCGTAAGCACTAATCCGGCTTATGCTTGGGGTGGCGTAGGGCGTCTGGAACTGGGTGGCCAGACCATGTTTGATGTAGGTAGCCTGAACCGCGATCAGCGTGCCGCTGTTTGT # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 62090-61695 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXQ01000009.1 Acetobacter indonesiensis strain NBRC 16471 sequence09, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 62089 29 100.0 32 ............................. TTGGTCGATCTACTCTGTATAGAGCGTTGCGT 62028 29 100.0 32 ............................. ACGTTTTTTCCCACGGGTTGAGGATCGACACG 61967 29 100.0 32 ............................. AAGCCAACGCGCAAACCCAACTGCCTCTCGTT 61906 29 100.0 32 ............................. AGGGGGCTGTCATTTACGGCGTCTCTTTATTC 61845 29 100.0 32 ............................. TTGCGGAGCAGCGCAAAGGACTGGCCTGCACA 61784 29 89.7 32 ........T...C.T.............. ATGGGGTGGAAGCCCCTTGCCTGTAGTGAGGA 61723 29 75.9 0 ............G.T..A.....A..GTT | ========== ====== ====== ====== ============================= ================================ ================== 7 29 95.1 32 GTGTTCCCCGCATACGCGGGGATGAACCG # Left flank : AACGCACCAAGAGCAATAATCAGCCCGCTATCGCCCAGTAGTTTACCCGCCCCAGTCTGAAACGCTGTCAGCGCACGGGCAGGTGCCAACCCTACGCAGGCACTGAAGACAAGCGCCCCAATCAAAATGCCCAGAAATGGCGGAAGCTTTGCCACGCTAATGGCAAGAATAATCACCAGCAACGCAAAAGCACATGACAGGACTAACCCTGTATCGTGCGTCCCCCAGACAACAAGAAAATGCAAGCCCGTAGCCCCTTATGTTCTTCTTTTTGGGCTATCTCACCCCATCTTGCGGGCTGAATACACATCAGGAATGCGTGATGTGTGACGTCGGGCGTATTATCCTGACCTTTGCTTGCAGCAGCATACCTCATGGTGCGTTAAGGCTGTCCCAAGGCCTCTTTCGCGAGGGTAAAAAACGAGCTAAAAAAGGCGTCAAAGCTTGGTAGATTCTTTGACAACAAAATAACCCTGTAAAATCAAACTATTCCAGGAAGT # Right flank : AAGTTATTCTTGAGGGTCTGGAAGTCAGTTTGCAGGGTTATGTGCTTTAGAAGACCGTATTGATGGCAAATTGAGGGGCTATTTTTATGCTGGTGTTATGGCCTGCATAATAAAGGGATGCCCCGGCAATAATGCCCCAGTTGGCGTTCCAGTTATATTCAAATGCGGGGGCTACCTGCCAGTCGCCTGACGGTGCGCCGGTGCGGTCTGTATAGCTTCCTGCTTTTGTGTGGCCCCACACGCGGGACCCATTGGCCCAGTCGCGCGCGACGTCAATTGCCAGAAGCCATTGGCGGTTAATCCCGTATTCAAGTGAAAACCCGGTTTGTCCGCTCATGCCCGGGCGGCCTTTGCCGCGAAAGCCTGTTGTGGTGCCATAGGTGGAGGTATCGCGCACATCTGCTGCGTTCAGCGCGCGTCTGAACCAGTTCCAGACGCGCAACCTCAGGTTGTGGTTGCCGGGTAGTTTATAGGTTGACTGGCTCATTAACGCCGTGCGG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGAACCG # Alternate repeat : GTGTTCCCCGCATACGCGGGGATGAACCGT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 117798-117584 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXQ01000009.1 Acetobacter indonesiensis strain NBRC 16471 sequence09, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 117797 29 100.0 32 ............................. ATAAGCGGAAGCCAGCCAAAAATGGCAAAAGC 117736 29 100.0 32 ............................. GCCATGTCAGACGCTTTCCGATCCGTGATGCG 117675 29 100.0 32 ............................. ACCGGCCAGAAATGGAGGGGCTGTGCGATTTT 117614 29 79.3 0 ............T.T........A..TAC | AA [117588] ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.8 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGTCCTTCTGGCTGGTGGCGCAGAACCACCGCCTGCACAGCCCGAAGCAATGCCTGTGGCCTTTGCTGACCCGAAAGGACTGGGTGATGCTGGTCATCGTGGTTGAAAACGCGCCGCCGCGTTTGCGGGGGCGGCTGGCAGTCTGGCTGCTGGAGGTCCGGGCTGGCGTTTACATAGGCAGCTACGGACGCCGAGTGCGTGAAATGATTTGGGGACAGGTCTGCGCCTATATAGAAGATGGAAACGGTGTCATTGCCTGGGCCGCCCCGAATGATGCGGGTTTTGAATTTGATACATGTGGCAAAAACCGCCGTGTCCCAGTTGATCTGGATGGACTGCGACTAGTTGCTTTTGACCCCGAAGCTGCATTGCCAGCCCAACAGGGCCCAGCCACAACCATACTTCCCCGCCGACGCGGAAGAGGGTAGAATACAGCCTGCGTAATCGGTAGTTTCTTTGACAACAAAATAATCCTTTGAAATCAACTCTTTCCAGAAAGA # Right flank : AGTTAGAACGTGAAAGCCACGTTAGCGTTCATCTATGATGCTTTTGTTGCCATATAGGCGTGAAAGACACCGAATGAGGTGTGTTTGCGGACGTTTGAAAATCCGGCCTGTTTCAGGTTCTGAAGAATCTGGTCAGGGGGGATGCACTGTTCGATAGTATCCCAGTAATAGGCCATCAGAGTGCGGCTTTCGCGGGATGCGGTAACGCCAGACAGGAAGGGCACTACTTTTCCCAAGTAAAAGCGCAGAAACGCTTGCACCGCAGGGGAACGGGCGCGACCGATTTCAAGAATAAGCATGTTACCGCCGGGTTTCAGAACCTTCAGATACCCCGTGAATGTTGCGTTCAGATCCCGAACATGACGCAGGGCATACCCCATGCTGAGCATATCCATGCTGTTATCGGCAAAAGGCAGGGCTTGCGCATCGGCCTGCACAACCTGAATGGGCAGTTTGCTTCGGCATTCTGCTAACATACCTGCACTCATATCCAGCCCGAT # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //