Array 1 59638-59431 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKDH01000014.1 Corynebacterium aurimucosum strain 2218 NODE_14_length_105980_cov_187.561, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 59637 24 100.0 37 ........................ GCTCGTGAGTACCCCAAATAGGGGGTAGTCCATCAAG 59576 24 100.0 37 ........................ GCTCCTACCTGGGCGGGGTTCCTATCAGCGTCGCCCT 59515 24 83.3 37 ...T.........TT........G GCGTCGCCCCGGCAGCCTCTGACAATCTTGACCAGCC 59454 24 95.8 0 .....................T.. | ========== ====== ====== ====== ======================== ===================================== ================== 4 24 94.8 37 GTACGCCCCACGCACGTGGGGATA # Left flank : ATGAGCCCATTCCCTCGATGAAGCGGTGCTCGGTGACTAGGTGCTCCCCGCGTGAGCGGGGATGAGCCCCCTTAGACGGGGTACCGCGCTGCGCGTTAATAGTGCTCCCCGCGTGAGCGGGGATGAGCCCAGCTCAGTGTCACGCAGGCCACCAAAGATGGAGTGCTCCCCGCGTGAGCGGGGATGAGCCGACACCGACCGCACGCCAGCATTAGGGCCAACGAGTGCTCCCCGCGTGAGCGGGGATGAGCCCTCAACGGCATCCACACCTTCATCATCCCCACTGTGCTCCCCGCGTGAGCGGGGATGAGCCCAAGACCGGCGTCCTCGAGGATGAGGAGCGCCCGTGCTCCCCGCGTGAGCGGGGATGAGCCGCACTACGTTGTCGAGGTCCTCGGCCTGCTTCTTTGCTCCCCACCTGACCGCGGAAGCGCTAGGACTGCGACAGTCTGCTATAGTCGGATCTACTGTTGGGACGGCGTTCATGCAGTTGTCGGAGA # Right flank : ACCTCGGTAATGCTCACCACGTAAACAGGTATGAGTTTGTATAGGCCGTTGGAAGCGTTGTGTCCAACGTGTAGTCGAGCGAGTTTCCCAGTCGTTGTTGTTTTCGATATGGCGTGCACTCCGTTGCAGAATTTCTCGCTTTTCTTCGCTGGAGTTTCAATACTGACCTAATTTCGTAGTTTTTCTTTTCATGAGAAAACTAGGTCTTCCCCTTTCGCAGTACGCTAGGGTCAGTATTTGTGATTCAGGACGTCGACCCGCTCATCCATTCCCTGTACCAGGTCTTTGACCTCATCGGTGTGGTACTCAACGGCATTATCGGTGGCACGATTGCACGCCGTAGGGAATTCGACATTATTGGCTTCGTCTTTCTGGCGCTCTTTTCGGCGCTGGCTGGCGGCATGATCCGTGACATGCTGATCGCCAGCGGTCCGGCAGCGGCGATCTCTGATCCGCTGTACCTCACGCTGGCGTGTGTGGGCGCGCTCATTGCGTTTTTG # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACGCCCCACGCACGTGGGGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 62537-59702 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKDH01000014.1 Corynebacterium aurimucosum strain 2218 NODE_14_length_105980_cov_187.561, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 62536 29 96.6 32 ............................G CATGACCCCGGAGACGGCACGCTACTGGCTGG 62475 29 100.0 32 ............................. ATGACTTCCCCCGTGTAGCCGCTGTCGATGAT 62414 29 100.0 32 ............................. GGGTTTGTTTCCGTGGCGAAAGCACTGTTTGA 62353 29 96.6 32 ............................G ATTGGGCGTGGTAGCCGTGGATGCTATCAACC 62292 29 100.0 32 ............................. GCATGTTTCGCCCCACCTGTCAGGTGGAGTGA 62231 29 96.6 32 ............................G CGGTCAAAGACACAGCCGGTGGCAAGTCCAAA 62170 29 100.0 32 ............................. CAGCCCTTGACCGTGTCAAGGCCGCTCTTTAA 62109 29 100.0 32 ............................. AACACAAGAACACCCGGAGGCGGGCGACGCTT 62048 29 100.0 32 ............................. ACGGTTCCGTTATCCCAGCGCAGATAATCGGT 61987 29 96.6 32 ............................G GTCTATCCCGAATGGCCCGATGTGGCTACAAG 61926 29 100.0 32 ............................. GCTTATGCAATCCTCGCCGCCTGCGACCTAAA 61865 29 96.6 32 ............................G TACGGCGGGATTAAGTCGAATCATATTCACCT 61804 29 100.0 32 ............................. AGTGCGCACTCGACGCACTAACCGCAGGTGAC 61743 29 100.0 32 ............................. CCGGCTCGGGCTGTGGCGGATTTGCCGGTGAG 61682 29 100.0 32 ............................. GCAAGCCCGTCGTGCCTAGCAGCATCACAATC 61621 29 100.0 32 ............................. GGACCAGTTGCCCGCCCAATCAGGGCCGAACA 61560 29 100.0 32 ............................. TTTCGGGCCTTCTCACGTGCCCGCTCCATCGC 61499 29 96.6 32 ............................G TGATGAAATCATCGCTGCTAATCGTCCGCTTC 61438 29 100.0 32 ............................. CGACACACCGGCAAACTCACCGGCGTGTTCTC 61377 29 100.0 32 ............................. AAACGCCAACAGTTCCTTGGAGGACACCAAAC 61316 29 96.6 32 ............................T CATTGACACCGCAGCAGCCACCGCCGACTTGA 61255 29 100.0 31 ............................. CCCAGCAGGGTGTCGGGGCGTTTCAGGTCGA 61195 29 100.0 32 ............................. CTGGGACTTAAGCCCAGCCAAATCACGACGGT 61134 29 96.6 32 ............................T GACCCCCACCCCGCGCAGGGGTGAGGGTCAAA 61073 29 100.0 32 ............................. GCCCGCGGCTCCGGCAGGCCCGCAGCCTTAGC 61012 29 96.6 32 ............................G GCCACCAAACTCATAAATCGGGTGCCCGTCCT 60951 29 100.0 32 ............................. CAGAGGCGGTCCACGTCACCGCGACAGGCATC 60890 29 100.0 32 ............................. GCCGCCCGATGCAGCCCGGTCTGACGAGCCGA 60829 29 96.6 32 ............................G CTGAAGAAGTCACCACCGCAATGATGCGCGGA 60768 29 96.6 32 ............................G AAAAGGCGGCGAGGTCACGCAGAACCGTCATC 60707 29 100.0 32 ............................. GGTGACGCCATCGGCAACCGTGACCAGCTTGA 60646 29 96.6 32 ......T...................... CGCCCCGGACACGCTACGCGTGGAATGCCCAA 60585 29 100.0 32 ............................. GGCACCTGCACATCGCGCACAAAACCGCCAGA 60524 29 96.6 32 ............................G TAATTTGAATGCGCACCGTATCCAGCCCCGGG 60463 29 100.0 32 ............................. GCGCCGGTCTTCTTGTCAATGATTGCGGTATC 60402 29 100.0 32 ............................. CCTCCGGCGTGGGCTGTTGTGTGGCTCATCAT 60341 29 100.0 32 ............................. CCTTAGACGGGGTACCGCGCTGCGCGTTAATA 60280 29 100.0 32 ............................. TTGGTACGCCACTTCGCGGCCTCAGCGTTGAG 60219 29 100.0 32 ............................. CGGGCCGTCGGGTTACTGTCGGACCAGTCATT 60158 29 100.0 32 ............................. ATTCCCTCGATGAAGCGGTGCTCGGTGACTAG 60097 29 100.0 32 ............................. CCTTAGACGGGGTACCGCGCTGCGCGTTAATA 60036 29 100.0 32 ............................. AGCTCAGTGTCACGCAGGCCACCAAAGATGGA 59975 29 96.6 33 ............................G ACACCGACCGCACGCCAGCATTAGGGCCAACGA 59913 29 100.0 32 ............................. TCAACGGCATCCACACCTTCATCATCCCCACT 59852 29 100.0 32 ............................. AAGACCGGCGTCCTCGAGGATGAGGAGCGCCC 59791 29 96.6 32 ............................G CACTACGTTGTCGAGGTCCTCGGCCTGCTTCT 59730 29 69.0 0 T........A.C...C..C...A.C..TA | ========== ====== ====== ====== ============================= ================================= ================== 47 29 98.3 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : AACTCGAAGTCATTGCTTCAGGAGTGAACTGGGCTGAAGAGGAGACACTTTCGTGATCGTTCTTGTCGTAACTGCATGCCCCGCTGGGCTTCGGGGCGACTTATCAAAATGGCTGATTGAACTAACGCCGGGCGTCTTTGTCGGCCGCCCTTCCGCACGAATTCGTGACTTGTTGTGGGAGCGAACCGTTGAACTATGTAAGGACGGAAGAGCATTACTAGTCTATTCGGCAGCAAACGAACAGGGTTTAGAATTCCGGACTCACCGGCATCATTGGCAGCCACAAGACTTTGATGGTGTCACGCTCATGGTTCGTCCTGCTCCTGGAAGCAAGAAAGTTCAGAACAGGACTGGTTGGTCACAAGCCCGACGGATTCGTTCGGCATACCAGAAACAGAAACGAAAATAGCTGAGGAACTCTAGACAGGTTCTGTGTCTCTTCCGAGAAGAAGCCGTATGTAAACTGAGGGTACGGCTCCTTTATACGCTGCTCAGCAAGT # Right flank : GGACTGCGACAGTCTGCTATAGTCGGATCTACTGTTGGGACGGCGTTCATGCAGTTGTCGGAGAGTACGCCCCACGCACGTGGGGATAGCTCGTGAGTACCCCAAATAGGGGGTAGTCCATCAAGGTACGCCCCACGCACGTGGGGATAGCTCCTACCTGGGCGGGGTTCCTATCAGCGTCGCCCTGTATGCCCCACGCTTGTGGGGATGGCGTCGCCCCGGCAGCCTCTGACAATCTTGACCAGCCGTACGCCCCACGCACGTGGGGTTAACCTCGGTAATGCTCACCACGTAAACAGGTATGAGTTTGTATAGGCCGTTGGAAGCGTTGTGTCCAACGTGTAGTCGAGCGAGTTTCCCAGTCGTTGTTGTTTTCGATATGGCGTGCACTCCGTTGCAGAATTTCTCGCTTTTCTTCGCTGGAGTTTCAATACTGACCTAATTTCGTAGTTTTTCTTTTCATGAGAAAACTAGGTCTTCCCCTTTCGCAGTACGCTAGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //