Array 1 5-1741 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJZH01000016.1 Tabrizicola sp. YIM 78059 Scaffold16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 ............................. ACGCTCCCTGCCCCAAACTGGCAGTCCAGACC 66 29 100.0 32 ............................. CGATCGAGCGTCAGCTTGCCCACGTCCCCGAC 127 29 100.0 32 ............................. CTCTGTCATGCAGGTCAGACGACAGATCCCGT 188 29 100.0 32 ............................. CTGGCTGCGAACGGAGGCAAAACCAGCGGCGT 249 29 100.0 32 ............................. CTGCATTCCTTGATCAAACGCATCTGAAAGGG 310 29 100.0 32 ............................. ATGTGGGAGCGCCAGGGCGTCACGGTCGAAAT 371 29 100.0 32 ............................. CGCGGTGTTGTTGCCAGAGGCAGCCATCCCTT 432 29 100.0 32 ............................. ACGCGGCTGTCGGAAATGTCGCCCGAAGTCCT 493 29 100.0 32 ............................. CTGTTTTCCAACCTGACCAGTATCGTCAACGG 554 29 100.0 32 ............................. GCGTATGAAATTGAGGCTACGCCTTTGTCCGT 615 29 100.0 32 ............................. TGCTCCGCCATGGACGGTGCAGTTGGCGCCGA 676 29 100.0 32 ............................. GCGGAAGCCGATCCACACAGCCTGAGAGGAAA 737 29 100.0 32 ............................. AATAGGAGGTGTAAATGTGTGAATTTCAGGTA 798 29 100.0 32 ............................. TCGGACGCTGGGCGCTGAAATGCGCAATCATC 859 29 100.0 32 ............................. CCCAGCCTGAGGGTGGCAATGCGCATCGCGGC 920 29 100.0 32 ............................. AAGTCATGGATGACAACGCCGTCCGCGATGGA 981 29 100.0 32 ............................. AACACGTTGCGCCCGCGCGCGAGCGCCGCGAG 1042 29 100.0 32 ............................. CCCCGTCCCCGATCTTTGCATCTTTGGATATC 1103 29 100.0 32 ............................. CCTCGAAAACGCCCTTGCGCAACTGCTGATAG 1164 29 100.0 32 ............................. CGTTCAGTGTCCACGAGAAAACTCCTGCATGT 1225 29 100.0 32 ............................. CCGCACAGTTCGATCCATGTGTCGCAAGCCTT 1286 29 100.0 32 ............................. GAAGAGGAATCGCGGTGGGCGCGGCAACAATT 1347 29 100.0 32 ............................. CTGCTCTCCTCTACAGTTCAGACACCAGAAGC 1408 29 100.0 32 ............................. GCGGTGGCGCGGCTGTTCGGCCACGCGCCGGG 1469 29 100.0 32 ............................. ACGGCTGGCGCGCCGCTGATCGTGAGCCTGCG 1530 29 100.0 32 ............................. AAACACGTTCCGGCCGCCCGCCAGCGCGGCCA 1591 29 100.0 32 ............................. TTGGCTCTACTGCACCCGCGTGTCCCGCCGGG 1652 29 100.0 32 ............................. TCATCGGCGACGCCGTGGGCTTCGAGGCAGTC 1713 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 29 29 100.0 32 GTGTTCCCCGCCCACGCGGGGATGACCCG # Left flank : CCGTG # Right flank : GCCTGGCGGCAAGGGATGGTGGGCATCGGCAAGGCTCGCCACCAGATCCTTGCAGGAAGGGCGGCGACGGGCGCATGCTGCGGGTCGTTCCCCGGGGCAGGGCGCATGCGGCAGGGTGCCCGGTGTGTAGCCGGCCTCAGGCCGGAAAGCCGGCAGCGCATGAAGCCCCTGAAGACGGCCCTGCGGCCCGCAGCATCGGCCGCAGGGCCTGGGACTGCCGGTGATTCAGGACAGCGTGTCGGGCAGTTGCGCGGCGGTTGGTCGGCCCAGAAGCTCTTCCCACAAGGCATGGCGGCGGACGTCGAACCAGGCGCGTGCCTTGGCCCAGTCCTGCTTGCCGGCTGGGCGGAACCCGTGGGCCAGGATCGAGTTGTTGCGGGCCGTCTGCCAGTCGGGCGTCTTGAAGCCCCGCTCATCCTGCGGCCATGCCTTGACGAGCGTATCCCCGGGGTCGAGATGCGCCAGAAGCGACAGCGCCCGGAAGAGCGGCAGCGCCACCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCCCACGCGGGGATGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.01 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 2 50365-53016 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJZH01000016.1 Tabrizicola sp. YIM 78059 Scaffold16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 50365 29 100.0 32 ............................. CCAATGGGCTTGACGCCACCGAGTATAGGCCG 50426 29 100.0 32 ............................. AGCGCGCCAGCGTTTGAAACACTGCTGGAAAC 50487 29 100.0 32 ............................. TCATCAGCGTGATCACCATTGGCCTGTCGAGC 50548 29 100.0 32 ............................. CCGTGCGCGCCGCCGGGTGTTTGCGATCAAGG 50609 29 100.0 32 ............................. TTCTCCCGCTCCCACACCAGATGCGGGAGAAA 50670 29 100.0 32 ............................. TCATGAAATCCCACCACCCTCGTCTGCTTATC 50731 29 100.0 32 ............................. ACGGTCAACTGGCGGGCGCGCTCGATCACGCT 50792 29 100.0 32 ............................. ATCGGCTGCCAGCCTCTGCCGGCTGGCAGCAT 50853 29 100.0 32 ............................. GCCATGACGCCCGCCCCCGCCCCGGCGGCCGT 50914 29 100.0 32 ............................. CCGCACAGTTCGATCCATGTGCCGCAGGCCTT 50975 29 100.0 32 ............................. GGACGGGCGGGGGTGGGGGTGGAGTGACCGCG 51036 29 100.0 32 ............................. ATAGACGTGGGGCGGCAGCGAACGGCGGGTCA 51097 29 100.0 32 ............................. CACGCCCGCATCGCACCCGTGGCAGCACCGGT 51158 29 96.6 32 ............................T GCGGTGCGGGCGTGCTTTGATCTGGCTGGCTC 51219 29 100.0 32 ............................. TCCGGCATCCCGAGCGCGCCGGGGTCTGCGCG 51280 29 100.0 32 ............................. ACCGCGTAATCTTCCGGCTGCATTCGACTGAC 51341 29 100.0 32 ............................. ATACGTCCCGCAAGGAAAGCGCTTCCGGGCTC 51402 29 96.6 32 ............................C ATCCATTCCCACACATTCAGGTGGTCATAGGC 51463 29 100.0 32 ............................. GACATTGAGTTTGCTTGGGCATTTTTGCAGCC 51524 29 100.0 32 ............................. CCGCACTTCTGGCTTCCTGGTTTTACGCGGGG 51585 29 100.0 32 ............................. TTGATGCTACGGGGCAAGAACTGATAGCGCCA 51646 29 100.0 32 ............................. TATAGTCATTCGCCGCGAGAGCATGATCCGAT 51707 29 100.0 32 ............................. AATGCGCCGCCAGCGTGGGCACCGGGCCTCCC 51768 29 100.0 32 ............................. ATGCCATTTCCGCCTATGAGTCGTTTGAGAAC 51829 29 100.0 32 ............................. CAGTAGCTCCCGGCTTCGCTCGGGTTAAGGCG 51890 29 100.0 32 ............................. ACCCCGAACGAAACGCGCGCGGCTGAGGGGAT 51951 29 100.0 32 ............................. CGCCCCGGGCGCCTTTTGCAATCGTCGGCCTG 52012 29 100.0 32 ............................. CGTTGCCATCAACTCATCCGAGTCCACGCTTG 52073 29 100.0 32 ............................. TTGTCCCGCAGGCGGCAGAACTCGGTTTCGTA 52134 29 100.0 32 ............................. CTGCTCTCCTCTACAGTTCAGACACCAGAAGC 52195 29 100.0 32 ............................. GGAAGCCCCTGATCCGACGCCAGCATACAAAT 52256 29 100.0 32 ............................. CTCCGCCCTCAGATCAGGTCGGCGCCGTGCCC 52317 29 100.0 32 ............................. CACACGAGAGGATGAACAATGCGGACCTTGGT 52378 29 100.0 32 ............................. ATACTGAGGCCAGAGGGGGAAACCGTCGCGCG 52439 29 100.0 32 ............................. GCGAATTTCTTTGATCCGTTGAATAGCGTTGA 52500 29 100.0 32 ............................. GCAATTTTCAGCCCCTCGAAGCCCTTTTGCAC 52561 29 100.0 32 ............................. CCGGTCTGCGAGTAGTAGCCATTGGCCCGCAT 52622 29 100.0 32 ............................. CTTGCGGAAATAGCGCCATTTCCTAGCGTATC 52683 29 100.0 32 ............................. CTGGCAGTGGGCAAAACACAAGCGACAGGTCG 52744 29 100.0 32 ............................. CTGGCAGTGGGCAAAACACAAGCGACAGGTCG 52805 29 100.0 32 ............................. AAGGATCAACAATTGCCGTTGTGGTGTTCCGT 52866 29 100.0 32 ............................. ATGGCAGTGGGCAAAACACAAGCGACAGGTCG 52927 29 100.0 32 ............................. AAGGATCAACAATTGCCGTTGTGGTGTTCCGT 52988 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 44 29 99.8 32 GTGTTCCCCGCCCACGCGGGGATGACCCG # Left flank : TCGAGGAGGTCCTCTCTGCCGGCGAGCTGCCCAAACCCCCGCCCCCGCCCGAGGCCGCCGGCCCCGCCTTTCCCGACCCGGAGGAAGGGCCATGATGGTCATCGTGATGACGAACGCCCCGCCGCGGCTGTCGGGGCGGCTGAAGGTCTGGCTGCTCGAGGTGCGGGCGGGGGTCTTCGTGGGCGACTATTCGGCCCGCACGCGCGAAAGGATCTGGGATCAGGTGGTGGCCTATATCGAGGACGGCGACGCCGTGATGATCTGGGATGCGCCGACCGACCAGGGCTTCGATTTCGCCACCGTGGGCACGAACCGCCGGATGCCGGTTGACTTTGACGGGCTGAAGTTGGTCAGCTTCTATCCGAAGGATCACCCGATGTCGCAGCGCCCCGGCCGTCGCCTGCGACCGAAGGGCGGACCCGGCCCCGAATCGGGCCCGGAAAACCGGTAGGCTCTTTGACAATTGAAATCTGCTGGTAGATCAACTATCTGCCGGAAGA # Right flank : ACGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCCCACGCGGGGATGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,1.15 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //