Array 1 204560-203070 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLCU01000003.1 Klebsiella pneumoniae strain k223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 204559 29 100.0 32 ............................. CATTTCATAGTGATTCGACTATTTAATTAACA 204498 29 100.0 32 ............................. AGTTCACGACAGGCAAAGTCTTTACGGTATGC 204437 29 100.0 32 ............................. TCTGCTGGTTACAGGAGAAAAAAATGATTGGT 204376 29 100.0 32 ............................. TTATTTCTAAACTAAGTTTTGTTTCATGCAGT 204315 29 100.0 32 ............................. TTTTTTTGACGAAGACGGCAACGAGTTAGAAG 204254 29 100.0 32 ............................. GTCTCTGCCAGTTTTACCTGCTCAGCGGATAA 204193 29 100.0 32 ............................. CTGACAGCTGGCGCTAACCCGTCGTTTATCGC 204132 29 100.0 32 ............................. CGTGAGCATCTGGGCATCTTCAGTGATAGCGT 204071 29 100.0 32 ............................. TATTTTTGAGATGATGGATTGTTGCACACCAG 204010 29 100.0 32 ............................. CGCTTCTCGGCTTCTCTGAATTTATCCGCCCA 203949 29 100.0 32 ............................. ATCCCGACCCGCTCCTCCAGAGCGAATACGAT 203888 29 100.0 32 ............................. TGCTTTATGGCAAATAAGAGAGGATATAACCA 203827 29 100.0 32 ............................. GCGTCCGCCTCCCAAATAGCCAGGCTGTTATT 203766 29 100.0 32 ............................. TAAATCCCAGCTGGTTTGACGTAGTGGCACTG 203705 29 100.0 32 ............................. CAATGAAGGCTTATAAGGGTGAAGAGAGCAGG 203644 29 100.0 32 ............................. CAGTCGGTAACGGCTGGGCGTGACCTCAAAGC 203583 29 100.0 32 ............................. GTGCCATTTTTATTTTGCTTAAAATAAATATC 203522 29 100.0 32 ............................. CCTATTGTGTTCAGTCGTAACAGCTGAATCAG 203461 29 100.0 32 ............................. GGCGCGGCGGAATAACCACTTTATGAGCAGGT 203400 29 100.0 32 ............................. GCGACCATGCCGTAGTCTTCAATGACGTAATC 203339 29 100.0 32 ............................. CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 203278 29 96.6 32 .....A....................... TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 203217 29 100.0 32 ............................. TCACCCTCGTAGCCGATACCACTTTCGCGCAG 203156 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 203098 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTTAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTACCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //