Array 1 17984-16853 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZXK01000061.1 Citrobacter sp. wls618 contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17983 29 96.6 33 ............................T GAGACCTTCGTATTCAAAGCCAAGGTGATAATC 17921 29 100.0 32 ............................. GTATTTCTTTCGCTTGTCGGTACAGACACGGC 17860 29 100.0 32 ............................. CCACCGGAGATTTGAGTAGCGCCAAAATCTGG 17799 29 100.0 33 ............................. GCAATTACTGACGGAGGAGAACCTGTGGCGGAT 17737 29 100.0 32 ............................. TCCTGCCGCTCTTTGCTGTCCCAGTTCTTCGC 17676 29 100.0 32 ............................. CGTCAGGCTGCCAGGTGGCGCGGGTATGGGGC 17615 29 96.6 33 ............................T GAGACCTTCGTATTCAAAGCCAAGGTGATAATC 17553 29 100.0 32 ............................. GCTATCAGCTGGCGGATTACTGGTGGTACCTG 17492 29 100.0 32 ............................. CCGTTCGGCAGCGAGATCAGCCCGGTGAGATC 17431 29 100.0 32 ............................. AGTCGGCGAACCGACTCGACCAGCAGGTTGGT 17370 29 100.0 32 ............................. GTGCCGTCAGGCATTTTGAGGCCCGTCGTTTT 17309 29 100.0 33 ............................. GATACAGGTGTTAGAATAGGAAACTCTTCCCGC 17247 29 100.0 32 ............................. CCGCATTCGTCGACCTGGTGGGGGCTGATGAT 17186 29 100.0 32 ............................. TCAGTAAAAACGACTGGGAACTGGTAGAGGAT 17125 29 100.0 32 ............................. TCGAACACCGGTCATTGCAGTTGCTACATAAC 17064 29 100.0 32 ............................. GTTGACGCATGACACAGGTTAAAACTGAAACA 17003 29 100.0 32 ............................. AGCAGCGCTATCGGCTTAGCGGTGCATTTGAT 16942 29 96.6 32 ............T................ GAACATCCTGAAGTACACATCAAAAACGAACC 16881 29 89.7 0 ............T............T..A | ========== ====== ====== ====== ============================= ================================= ================== 19 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCGCGCGGCACAGCTTGTTCTTGAGAGTGATGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTGTTTATTGCTCGCCAATGATCACCGGGAGATAAACCGAAATGGCGAACAGTAATCCAGTTATGAAATTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAACAGCAGGCGCCGTGCGTAGGCAGGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGGGGC # Right flank : CTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAATTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 18412-18221 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZXK01000061.1 Citrobacter sp. wls618 contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================== ================== 18411 29 100.0 32 ............................. AGCGCGCGGCACAGCTTGTTCTTGAGAGTGAT 18350 29 100.0 72 ............................. GCTGTTTATTGCTCGCCAATGATCACCGGGAGATAAACCGAAATGGCGAACAGTAATCCAGTTATGAAATTC 18249 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================================================== ================== 3 29 100.0 52 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGTTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATCCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : CGAACAGCAGGCGCCGTGCGTAGGCAGGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGGGGCGTGTTCCCCGCGCCAGCGGGGATAAACCTGAGACCTTCGTATTCAAAGCCAAGGTGATAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTATTTCTTTCGCTTGTCGGTACAGACACGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCACCGGAGATTTGAGTAGCGCCAAAATCTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAATTACTGACGGAGGAGAACCTGTGGCGGATGTGTTCCCCGCGCCAGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-2.39, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //