Array 1 11357-12514 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZTR01000015.1 Neisseria meningitidis strain Neisseria meningitidis isolate B166, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 11357 36 97.2 30 ........G........................... GGACGGCGGTTCTAAAATATGAAAACTCAA 11423 36 100.0 30 .................................... GGTCAGATTATAATAACGTTGAGCGCGTGT 11489 36 100.0 30 .................................... TATCATGATGAGCATATTTATGAAGAGGTA 11555 36 100.0 30 .................................... CTTTTCAATGTTAACTATTTTGCAAAGAAT 11621 36 100.0 30 .................................... GTAACCGTTGCTTTGCATGGTATTTTCAGC 11687 36 100.0 30 .................................... TTCCCATCTTACTCTCCCCTTGCCACTCAA 11753 36 100.0 30 .................................... CTCAACATTGTTGTAATCTGACCGCAACGC 11819 36 100.0 30 .................................... CTGAAGCCTCTCTTTTAACGCCATTTTTAT 11885 36 100.0 30 .................................... CGATTTACCACCCATAAAACCACCTCAAAA 11951 36 100.0 30 .................................... TAATTTGCGTTTCGTGTCGCTCATAAACCC 12017 36 100.0 30 .................................... TTTGCTTCCTTTTAAAACTGTTTTGACAGG 12083 36 100.0 30 .................................... ATAAGATGGGAAAATTACCATGAGGCCTGC 12149 36 100.0 30 .................................... ATTTTGGTCTATCACTTCTTTAAGCGATAC 12215 36 100.0 30 .................................... AATAACGGAGCGTTGCAATCCAGTTTGAAC 12281 36 100.0 30 .................................... CGAGCGAAACGAATATAAGTAAATGTGCCG 12347 36 100.0 30 .................................... ACGTTCGGGAGAATAACGCGTAATCAACAG 12413 36 100.0 30 .................................... GATTCATCAATGCTATTCCTATAATTTTGT 12479 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 99.8 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : GGATATTGTGCTAGAAGAAACAGAAAACGAGCAGAACAATGATTTCAGGCTGCCTGAAAATTTAGAACACTTTGATATTCAAATAGAAAATGTTTCTTTTCGCTATGCTGAAAATGAACCATACATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TATACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATGCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCAGTTACGCCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //