Array 1 3058-153 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABCPZ010000126.1 Nonomuraea sp. NN258 NODE_126_length_30848_cov_24.018489, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3057 30 100.0 31 .............................. ACGGGCGCGTGCGCACCATCCTGCGCGCCGG 2996 30 96.7 31 .............................A ACAGGGTCGCGGTCTGATGCGCGCGACCACT 2935 30 100.0 31 .............................. CGGCATGGACGTCGGCCTCCGCCAGGGCGAA 2874 30 93.3 31 ............................AG ATATCGGGATCTTCGCGACGGGGGAGGCGGC 2813 30 96.7 31 .............................G CCGCGGTGGTGACGTCGCCGGCGGCGGTGAC 2752 30 96.7 31 .............................G GGCGTGCCTTTCGTCGCGTCGGTGATGGCTC 2691 30 96.7 31 .............................G CGGCCGACCGCCGCCGAGACGTCGCCGGCTA 2630 30 96.7 31 .............................A CGGCCTGGTTGCCCTGCTCGTGCGGTTCGGG 2569 30 100.0 31 .............................. TCGGCTTGCCAAGCCTTAGTGATTCCCTGAA 2508 30 100.0 31 .............................. CGGTCACCGCCAGGATGCTCGCGCCCAGGCC 2447 30 96.7 31 .............................G CCACGACGTCACCCCTTCCCCAGGACGGCCT 2386 30 100.0 31 .............................. CCGCCGGCGCGCCGAAGAGCTCCAGCGCGGC 2325 30 100.0 31 .............................. ACACGCGCGAGACCGCCGACGGACCGTCTGC 2264 30 96.7 31 .............................G GCTGAGGGACGTAGGCGAATAGTCCGGGAAT 2203 30 96.7 31 .............................C TGTCCCCTATCGGGGGCCGGATCACTCTACG 2142 30 100.0 31 .............................. GGTCGGCTACGTAGTCCGATGGCGGTTGGTT 2081 30 100.0 31 .............................. CATCGACCTCCTCACCGCCATCCGCCCCGAC 2020 30 96.7 31 .............................C GCGAAGCGCTGAGAGCGATCCTGGCGGCCGT 1959 30 100.0 31 .............................. GCCTCAGATCTGGGAAGGGACGTCCGGGACG 1898 30 96.7 31 .............................G CACCCGGCACCGGCGAGAAGAAGGTCGCCAC 1837 30 96.7 31 .............................C TGTACACCATCGTGTGAGAGTGAGAGATCAA 1776 30 96.7 38 .............................G GATCCTCGACAGCCTGGGACGCTTCCTTGATCCGATCC 1708 30 96.7 31 .............................G CCCGCAACACAAATGTCGCCGCTGGCTCTCC 1647 30 100.0 31 .............................. GCTGGACGTAGATGGGCTCGCTTCCGGGTGG 1586 30 96.7 31 .............................C TCGGCGCGGCGCTCCAGCTCGGCGAACACCT 1525 30 93.3 31 ............................TG AATAAGCCGGGGTCTCCAGTCGGAGAGCCCC 1464 30 100.0 31 .............................. GCGACTCGTCGAGGTGGCGGGGCAGCGCCTT 1403 30 96.7 31 .............................A GGCCGGACGCGTTGGGCGTGACGAGCAGGGT 1342 30 96.7 31 .............................C CGGACGGGCCGGCGCACTGGCTCCGCCGCGA 1281 30 96.7 31 .............................G CGAGGATGAGCAGGATGAGGATTACGGCGTC 1220 30 96.7 32 .............................C GCTCGCACATGGCGAGGATCCAGCGCGCGTCG 1158 30 96.7 31 .............................C CGGACGGGCCGGCGCACTGGCTCCGCCGCGA 1097 30 96.7 31 .............................A GATCGGGCACCTCGCCGGACACGCTGGTGAC 1036 30 96.7 31 .............................C GCGCCACGACGGCCAAAATGCTCAAGGCTCT 975 30 96.7 31 .............................A GTGATCGACATCTTGAAGCCCTATGATCGCG 914 30 96.7 31 .............................A GCTCTCGGTGGAAGCTGTCGTATGAGGTGTA 853 30 96.7 31 .............................A GCTCTCGGTGGAAGCTGTCGTATGAGGTGTA 792 30 100.0 31 .............................. CCCAGGAGTTCGCGCAGTCCACCCAATCGAG 731 30 96.7 31 .............................G GCCGCGCCCCCCGGGACATCCTTGACCGGCT 670 30 96.7 31 .............................C TTTCAGTGAGAGTCGAGAGGAGGAGCCACGC 609 30 100.0 31 .............................. CCAGCGCCAGCGTGCTGCTGTACCAGCCGGA 548 30 100.0 31 .............................. CCATCCACTTCAGGAGGGAGACGATGGTCTT 487 30 93.3 31 ......................G......A GGTATCGGGGGCGATCTTGACGACGGACCTG 426 30 93.3 31 ..............T..............G AAGGCGACGCGAACACGCCGATCATCACTGT 365 30 96.7 31 .............................G CCGCCGCGGGCGGCCGGATGCTCAACCGAAA 304 30 96.7 31 ............T................. AGCCCTGCACGACGAGGCCCCCGCCCTCTTC 243 30 90.0 31 ......G..A...................G TCATCCGAGGTGAGCGGGTTGTCCAAGGGCT 182 30 90.0 0 ...A..........T..............A | ========== ====== ====== ====== ============================== ====================================== ================== 48 30 97.1 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCT # Left flank : TTTCTGGAGATCCCACTGCTCGTGACCTCCGGATAATAGGCAATGACGAGTGGCAGGCACTCCATAAGCGGATCTCTCTCTGCGAGACATGCGGGGGATGATCTTACTATGCCTACCGAAGTTGGGAGCTGTTTGCGCAGCTCACACCAAGTAGGCGGGCCATACATACCCCGCTCTCCTAAAGCGGGTGCCGCAGGTTCGAATCCTGCCGGGGGCACTATCGTCCAGCAGCGACAAAGAGCCCTTGACCAGCTTAAACGCCGGTTGAGGGCTTTCTTGTGCGTCCGGTGGTGTACGGCTGTGGGTGATCGCTTGCGGTTGATCGTGCCAAATACGTGCGCACGCCTAGCGGCATGCCACACTCTTGCCGGGCCCTCCAACAACCAGACCCTGATTCACCGCCTCCGATGCTCCATCCCACACAGGAGTCCGCAATGTCCGATTCCACGAAAGTGCTCCAAAACGGCCTCCGCAGCCGGTAAACGCGCAGGTCGGCGAGA # Right flank : AACCAGGCGAGCTTGCCGGCCACCGCCGGTTGCGTCCACGGAGGTGGTGTACGAGTTTCACCTGGTCACAGGCGTGCCGCCGGGAAATGAGGACGGTCATCGCGTGATCCTTTGAATGCGACACTTCAAGATCAAAGGAGACACGTGATGACC # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 23247-21997 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABCPZ010000034.1 Nonomuraea sp. NN258 NODE_34_length_64424_cov_22.520584, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 23246 30 96.7 30 .............................C CCGCAGCGCGCGCCGGGCCTCCCCGCTCGC 23186 30 96.7 31 .............................T TGGCCAGCTCCGCCACCTGAGCGGCGGTGTT 23125 30 100.0 31 .............................. CAAACTCAGCCCCGAGGGCCTGGCCGCCGTC 23064 30 96.7 31 .............................C CCCGCTCCACCAGGGGAAAAGTCTGTACGGG 23003 30 96.7 31 .............................A GCAAGTCCAGCAGGGCGCGCACCACGGCGAC 22942 30 96.7 31 .............................C AGGTCCTCATCACCACGCTGGACAACGCCAT 22881 30 96.7 31 .............................A CGTCGTAGGGCAGCTTCCACGCCCGAACCCG 22820 30 100.0 31 .............................. CCGTCGGCGCCACCGAATGACAGGGGGCTGG 22759 30 93.3 31 ............................TA GCGGGCTGTGACACTTTCCTGAGATCAACTG 22698 30 96.7 31 .............................A TGTACATCGCCTTGCCGCGCGCCACAGGATC 22637 30 100.0 31 .............................. ACGTCCAGCGCAGCAGGGTCACCTCGCCGGT 22576 30 100.0 31 .............................. TGTACGTGGAGGAGGGGTACGCCTACCGGGT 22515 30 96.7 32 .............................C GATCCCATGCCGCGCTCGGTGTAGATCCATCC 22453 30 96.7 31 .............................A GTGTGATCAGGGTCGCCCGGCCGGTCCGCCT 22392 30 100.0 31 .............................. GCACCTCGCCGAACTCGACCGCCGCCGCGCC 22331 30 100.0 31 .............................. AGCCCGGCGTGTTCTTCTTCACCACGGACGG 22270 30 100.0 31 .............................. TCAGGACCGTCTAATGACCGACACCCGCACC 22209 30 93.3 31 ............................TT CGGGCTCCGGCACAAGAGCCAACGCGGACTG 22148 30 96.7 31 .............................T CGCACGGGATCGTGGTCTTCTCCGCGCCCTT 22087 30 96.7 31 .............................T TGGGGGCGCGCGGGTCGATCAGGCCGGCGGC 22026 30 93.3 0 T............................A | ========== ====== ====== ====== ============================== ================================ ================== 21 30 97.3 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCG # Left flank : CTTGCCGATGTCGTGAATGGTCGCCAGCCATATCGCCAGTCGACGACCGTCTTTCAAACCGTCGGGAAGTCCTGCGGCGATTACTCGTTTAACCTGTAATGGCAGCCATCGGTCCCAGAGGAGCCCCGCCACTGCGCCGCTGTCAGCGAAGTGCCGCCACAACGGCAACCACCCATCGGTGTCCCGATCATGCTTCGCCCAGACAGTACGGGCATATACGGACAAACCATCAACGAATGCGGCGGGTTGCGACTCTTCGTTGAGCACGAGAGCTATTAAAGTGCATGAGACTCGCTGCGTTGCCATCTTTTCGGCAACAAAGCTCCAACGAGAGTCGGCCGGCCCCTGGAGAGCAGGGCCGGGTTGCCCAACACTCCTAGGTACTGCAGCCTGGAACGACTAGATAGTCAACTTGATAACCGAAATGTCCAGCCATGTCCTTTTCTGTGAAAGTGCTCATTTTCAGGCCCAGACGCTGACAACGTCGCAGGTCAGGGAGA # Right flank : ATCGCAACCGCGAGTTCGTCCCCTTCAAGGTGTGCTCCCCGGCTATCGATCGTTGATCGAGTGCAGTAGATGAACGACCGAGCCGTGCCAAATACGTGCGCAATTCTCGTCCGGCTCGCCTCTGCTCAGCCCTCTGACCTGGGGAAACGGCCAGGCTGTTTGGCTGACTCCTAAAGCGGGTGCCGCAGGTTCGAATCCTGCCGGGGGCACTCTTCTCCACCAAGCGATTCGCCTTCTGACCTGCGGTTTCTCAGCCGCAGGTCTTTGCTTTCCAGACCCGGATAGGCCACCGAGAGCAGGCGCATGCAGCCATAGGACCTTGATCACGGGATATGCACGGGATGATCTTGACGTTGTTTCCGCACGTCGAGTCCCTGTCTCAGCCGGACCGCCTCCATGAAGCCCAGCGATTGCACCAGGTCGAGCGCGGACGCCACCTTGCCGGTTAATCCCCGTGACGAACACGAACAGTCGATCTACTCTGAACTGAACGTCACAGG # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.48, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 36487-34012 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABCPZ010000034.1 Nonomuraea sp. NN258 NODE_34_length_64424_cov_22.520584, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 36486 30 96.7 31 .............................C GATCATGCGGCGTCTGGGGGAACGGGGGGAA 36425 30 96.7 31 .............................T TCAGGCAGAGCTGAAGTCAGAGCGTGAAGCC 36364 30 100.0 31 .............................. CGATGAACGCCCCGAAGGGCGGCAGGACGAT 36303 30 100.0 31 .............................. CTCGCGACGTACTCCCCGACATCGAGCGCGT 36242 30 100.0 31 .............................. TGGCCGGGGTGGTCGTGCCCGTGGTGGCCGT 36181 30 96.7 31 .............................C TCAGCAAGGGGTCCGTGCTCGAAATTGAATC 36120 30 96.7 31 .............................C GCACCTCGCTGCGCAGAGCCTCGGTCCGCGT 36059 30 96.7 31 .............................T CGCGGATCGCGCTGCGGGAGCTGAAGGAGAG 35998 30 100.0 31 .............................. TGGCGCTACCGGCCGTGCCCGAAGCGGAGAA 35937 30 96.7 31 .............................T ACCAGCACGAGATGCCGCGCGAGGACCAGCA 35876 30 100.0 31 .............................. ACCTGCACGACCGCCCGCGCACCGTGAGCGA 35815 30 96.7 31 .............................A GCCTGGGCGGCGCCGCAGTGGACATCACCGC 35754 30 96.7 31 .............................A GGGACTTGCTTAAGGGGGTTGTTAGAACGCT 35693 30 96.7 31 .............................A GCGTGTCCATGAGCGTCGTCGGGTCGACCGG 35632 30 100.0 31 .............................. CGCCCTCCTCCCCGTCGCCGTCGGCATCGCT 35571 30 96.7 31 .............................T GCCGAGACTCCGCTTGGTATAGACGAGCCCC 35510 30 100.0 31 .............................. ATCCCCGAGCTGTTCACCATGGCCCTGAGCG 35449 30 96.7 31 .............................C TGGAAACGCGCGAGGGTGCGGACGCCTATTC 35388 30 96.7 31 .............................C CGTACATGTCCAGCGTGGCGCTGCGGGAGAC 35327 30 96.7 31 ............................T. ATGCGCGCTTGCAGGGCTTCAACCTGGGGTT 35266 30 96.7 31 .............................A TGCCTGGAAGCGCCTGAGTTTGCCGCTGACG 35205 30 93.3 31 ............................TC CGGGCGGGTGCTGAACCACACCTATGTCGGA 35144 30 96.7 31 .............................A GTGGAGCGGATGATGGCGCGCATCGCGGACT 35083 30 96.7 31 .............................C TGACCCTGGATCGCCTGCGAGAGTTTCCGCA 35022 30 96.7 37 .............................T CCTGGTCGGCTTGGCATCTGGCTTCACGTCGAGCTCA 34955 30 100.0 31 .............................. AGTGGCGTCGGCTGGAGCTGCAGGACGAGGT 34894 30 93.3 31 ............................TA CGGTGATCGCGTGCCCGAAACGACAGGTCGT 34833 30 100.0 31 .............................. TTGACCCGGCTGAGCACGAGCTCAGCCGGGT 34772 30 93.3 31 ...........A.................T CCGGATGCTCCGTCGACCGGCCGCCCCGCAG 34711 30 96.7 31 .............................A CTTCGATCACGCCGCGCTCCTCGGGCACGCC 34650 30 100.0 31 .............................. TTGACCCGGCTGAGCACGAGCTCAGCCGGGT 34589 29 93.3 31 ....................-....C.... CGTACGAGTACCTGAAGAGGCTCTTCTCTGG 34529 30 93.3 31 .................C...........T CGTGCACCTTGCCGGGGGTGTCCTCGTGGTC 34468 30 100.0 31 .............................. CGCGCCGGGTCTCGCACACCTTCACCGCCTC 34407 30 96.7 31 ..............T............... CATCCAAGACGGGAAATACCCGCCCGGCACG 34346 30 100.0 31 .............................. CGCCCGCCACGCCCAGGGACAGGTTCTCCAT 34285 30 96.7 31 .............................T ACGTGCGGGGTGACGTGGTCGAGCTTCCGGG 34224 30 93.3 31 A...........................G. TGCTGCTGGATGAGGGTTTGCCGATGGCGGA 34163 30 96.7 31 .............................C AAGGACGGCCCCGCGCCCTCGTACCGGCCGT 34102 30 93.3 32 ................T............T CGGCCAGGTCGCGCAGCTTGTCCCGCTGTCCT 34040 29 90.0 0 .C.......-.....A.............. | ========== ====== ====== ====== ============================== ===================================== ================== 41 30 96.9 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCG # Left flank : CCGGCCCACCCGAATGGGACCTGACCTCCACGGCGGTGAAGGCGTTCACTCTGGCCGGCATCACGACCGAGGACTACGACGCCTTCGTCCGGGCGTACGGGCACGACGTCACCTCGTGGGCTGGTTTCGAGACCCTACGGGACATCCGAGAGTTCCGTATGACCTGCATGGCCGCCCAGGTGGCAGCAGAGAATCCCGCCCGGCGCGACGAGGCGGTGCTGAGGCTGGCGTGCCTGCGTGGCGAGCGTGGACCAAGACCGTGGTCCTGGACAGCCGTGCCATAGCGCGCTTCCTGCGCGCTGCCGAGAAGCTTGCCCATCGCGTGACATGATCATTTATCGATGGCACCGTAGACAGCCTGCATCCCACTCGGAGCGTGCCACACTCAGATGTGCTAAGCCGCCGCCTCCGCATCCGGCCCCGGGGAGCCCGCAATGTCCGATTTCACGAAAGTGCTTCAAAACGGCCTCGGCTCCCAGTAAACATGCAGGTCGGCGAGA # Right flank : TTCCGTCTTGCGAGCTGCACTCCTGGCCAAAGTGCTCCCGCGCACACAAGGAGCACCCGGAGATCGCCAGCCAACTCGTGCGGGCACCGCCACTCTTCGCTACGTCTATTGATCAGCTCTCCCGTATCGACGGCGCTTCGCCGCCTTGCTCCAGTTACGAGGCGCTTCCGATGAGGTCCGCTCCTGCCGCTCCTTCGGCCGGCGCAGCAGGATGAGTCCCTCGTGGTCGATGGGGTGCCACTTGTGATCATGTGTCTCGAAGGCGAACCCCTGCTCGTTGTCCGTGGTGTACGCAAGAAGTGCCCTGCCGGTGTCGGCGTACTGCTGGACCTGCAGCCAGAGTTGCTCTCGAATACGCGCTGACGGTCCCCCGATGAACACGCCGGGAGAGATCTCCATGAGCCAGCGGGTCAGGAACCCGCGCAGACCGACCGGGCATCGGGTGAGCACGATGACGGTCACCAGGGCACCTCATCCGCGTAGTTGCGCCCTGACTCCAG # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.38, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //