Array 1 96553-96780 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPIN01000017.1 Spirosoma arboris strain HMF4905 17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 96553 30 100.0 36 .............................. TTTGCTATTGAATGCCTTCATCTTTCGGGTTGGTTT 96619 30 100.0 35 .............................. TTTAGGCTGTTCCAGCAATTCAGGGTGATCTATGG 96684 30 100.0 37 .............................. GCGTGAAGCTGGTAAACAACTGCACATTTGAGTCGAA 96751 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 36 CTTCTAATCGTACCTGTGAGGAATTGAAAT # Left flank : GGTGGTAAACTAAGAGGATTATGTACGTAATTTTGGTATATGACATGGGGCAGAAGCGAGTTGGTAAGATGTTGAAACTCTGTCGGCGATATCTGAACTGGATTCAAAATTCGGTTTTCGAAGGCGAGATGACGGAGGTGCAGCTAAACGAGTTGCTCTACGAAGCCCGGCGCATTATGAAGGATGATGAAGACAGCCTGATCCTGTTTAAAAACCGGGACAAAAAGTGGTTAGACAAACAGATCGTAGGTATGGAACGCCAATCGACTGACGATTTTTTATAGGGGACTTGTCGTCAATCGACTCAATTTGCTCTTTGACTTCCTGGAAAGAGTTACCACAAAGTGGCATTTAGGACTCTATCCTACTGGCAATCAGCGAGTCGTCAATCGACGGACATTTTCTTAGTTTTATCGATTGACGACTTTTGGTCACCTAATGAGTTAGCAAAAACAACATCAGGGCTTCGCAAAGCCCTTTTTTTAGTCGTAAATTCACGG # Right flank : TTGTTGATGATGTAATAGTATTGAGTCGTGTTCTGTTACACTAGCGACTAGGAAATGAAATTTGAGTGGGCTGAATAACTGAAACGAAAAAAGCTACTCTGAACCAGGGTTCGCGAGGGCATAAGGTAAAGGCGACTTTGTTAATCGATTAAACCAGCCATGAAACCATGACTTCTATCATCTCTCACTCTCTTATAGGTTGATCACCGGGAACCGTCTTCTTTGAGAGATAAAGTCCCAATCCAGTGAAACTCAGTGAGGCAAAAAAACATAGGAGCGTATAATAGCTCGTAAAGGGCAAATAAAACGAGGTCGCAATGAAAAGTACAGAAATCAACAAAGAAACCAGGCTTAGAATTCGAAAGAAGTTACGTCTCATTCCCCCAAATTAACAATATAGGAAAATGATAAACATTAAATTATCGAAAAAGTAATTATATGGCAATCAACTGTTCTTTATTACTCAACGAGCAAAACTAACCAGCAAGCAATACCCACCA # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGTACCTGTGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 729483-730169 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPIN01000003.1 Spirosoma arboris strain HMF4905 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 729483 30 100.0 35 .............................. TTGAGACTCAGATGGCGAAGGCGAAGGCAGAAATA 729548 30 100.0 36 .............................. AAGGTTATAGCCTGAAGCAATTACCTGGATCGTATA 729614 30 100.0 36 .............................. TTGCCGGGCGCAGGCACAGACGGATACCGAACAGGT 729680 30 100.0 35 .............................. TAGTTTTTGCTCGGAACGGTTTGGTAAAACCTTCA 729745 30 100.0 36 .............................. GTGGCATTAGCCGCTTGCGCCTGGGCAATAGCTTGA 729811 30 96.7 36 .................C............ TGTTGTTTACCGCCGTGCCGTCAGGTCGGTCAAAAT 729877 30 96.7 35 .................C............ TTTGTACCGTTAACGGGAGGGTCAGGCTTGGGCAG 729942 30 93.3 36 ...............A.C............ CGATCCCCGATGTTCCAGTGGTGACGCCCGTCTTTG 730008 30 93.3 36 ...............A.C............ TGTTCCACTCATTTCCTCCGTCATCCGGGTCACGAC 730074 30 96.7 36 .................C............ GCGTCGGCAAGACAATGCTGTAATACTGGTCGTTGC 730140 30 86.7 0 ..........C.....CT.......A.... | ========== ====== ====== ====== ============================== ==================================== ================== 11 30 96.7 36 CTTCTAATCGTACCTGTAGGGAATTGAAAT # Left flank : CACATCGGCGGGGGATACCGTTGTGAATGAAACGATGCTCCAATTCGTCAACTCCGAACTTCCCTTTGGTGGCATCAATAACAGTGGTGTAGGCAAGTCAAACGGCTTTTTCAGTTTTCAGGAATTCTCCAATCAGCGGGGCGTCATGCAGCGTGACTTCGGCACTATGAAATTCATCTATCCGCCTTATACTGATACGGTGAAGAAACTGATCAATTACATCATGAAGTTTTTATAGTTTCCGTAAAAGACGAGGTGCCGACAACGCCAAAGTCAGGCAATGTCGTCGACCGTTTTTTTACAAGTAAATTTGTTCTTTGATCGACGGAAAATCCCCCAACTTAGGGCAACAACTAGCTCTATACCACTGGCTATCAGCGAGTCGTCAATCGGCCTATAGTATCGTAGTATTACTGAACGACGACTTTATAGACGATTTGGCCATGCTAATTCCCCCATCTAGGCTACAGAAAGGCTTTTTTTTAGTTGTAAATTCACGT # Right flank : TAGTGAATATAATAGCCTATAAAGTATCTTAACTTATGTACTATTGCTTCAAAACTTAACACAGATTCTTTTTAAAACCGAAGCAATTTCTATAGTATTGCGCCAAAGTATATTTTTCTAAAAAAACAGCTTACTTCTGGCACCAATGAATAAACGGCTCTACTCCGATTTTTTTTTAATTCGTATCCTGATAATCAGCTTTCTGACAGCCATCCCTGCTATTAGTTTTGGGCAGCTTTACAACAACACTTTCACGGGGGCTTCTGCCTGCCCAACCAATGGAAATGTACCAACGAATGGTGCTAATGCAACAGGTACTCCATTCACAAGAAATACAATAACCTGTATGAATACCGGAAATGTATTCAATTCGACAACCCTGAATATCACAGCGGCCGTTAATGATAATTCCTATATTCAGTTTTCAGTAACTGCCGATGCCGGCCATAAATTATTTATTACCTCGCTTAGTTTTTTTCGTCAGGCAAGTAACAGTGCAC # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGTACCTGTAGGGAATTGAAAT # Alternate repeat : CTTCTAATCGTACCTGTCGGGAATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //