Array 1 871543-870982 **** Predicted by CRISPRDetect 2.4 *** >NC_009715.2 Campylobacter curvus 525.92, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 871542 30 100.0 36 .............................. TTTTTATTCCCAGTCCAAAAACAAACACCTTATCGA 871476 30 100.0 37 .............................. GTTCATTGACCTTTGCGTATTTAGGCCCGATGATTTG 871409 30 100.0 36 .............................. GTCGAGGGCAAGAGCGACATAATAAACGGCACCGAT 871343 30 100.0 36 .............................. GCGGTCAGCCAACGATCGAGTGGCTGGATAATAACG 871277 30 100.0 36 .............................. CTTTTCCTCCACTCCCACGGCGGGATAGGCTCTTTA 871211 30 100.0 37 .............................. CCCGCATAGAGGCGTCTCAAAACGAGATTAAAACGGC 871144 30 100.0 36 .............................. AAAAGGCTTATAGTTTTAAGCAAAAACGAATTCAAA 871078 30 100.0 37 .............................. AATTTATTAAAATGTTTACATAACATCAGGAGTTTGT 871011 30 96.7 0 .........T.................... | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 99.6 36 ATTAAAGATCATTCCGTTGGAATTTGAAAC # Left flank : AAGAGGAGATATTTGGTCCTGTAGGTGTCGTCATCAAATTTAAAAACGAAGAAGAGCTTTTAAAGATGGTAAACGACAGCGAATACGGCCTAGGCGGCGGGATCTTCACTCAAGACATCACAAAAGCCTTACGCGTGGCTCGCTCAATGGAGACCGGACGTGTTTGGATAAATACCTACAATCAAATCCCTGCCGGTAGCCCATTTGGCGGCTACAAAAACTCAGGCATCGGCCGCGAGACGCACAAGATCATCTTAGAGCACTACACTCAGATGAAAAATATCATGATAGACCTGACCGGCAAACCAAGCGGCTTTTATAAACAATGATTTAGGGGGATACACCCCCTAAATTTCAGACGTTGAAGCGCTTTTTAAGCTTTTGATAATGCTAAAATATCGATATTTGAATCATCATAAAATTTAAATATTAGCTGATTTTAAGGAACAAAAACATAGGGCTTGACTTTTAATAGGCTTAAATTTTCATATTTATGCGCT # Right flank : CGCAGGTTAAAAATTGATAAAATTTAGAATTTCTAGCGCAATCAAATCTTATAAAACGACGCTATCGCCATCGCTCTGCTTGCAGTTGCGAGCATGGCGAAGCAAAAATCGTGCTACATGTCTGGCGTCTTGCGGAGCGTATAAGATTCGTGAAGCGTTTGCAAAAAATATCAACACTTTTTTAAAATAGAGCCACTCATTTAGACTCAGACACCCGCAAATCCCGCAGGGTACGCTCCCTCAATACTAAAGGCTATATCAATAAAAATCGCAAATTCCAGCCTACGCTACCACCCCATCCTCATAAATTTTCACGATCTTTTTATGCACCATCAGCGAAACATACATTATCGCTCCGCCAATAAGCAGCCTCAAAAGATCCGCGTCTTTATGCCAGATCACTAAATTTACGATGATGGCGGCCGGGATGAGCGCGTTGTTCATGATGGCAAGCACGCCGCTATCGACCTCGCAAGCGCCTTTGTTCCATAGATAATACC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAGATCATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 878431-878031 **** Predicted by CRISPRDetect 2.4 *** >NC_009715.2 Campylobacter curvus 525.92, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================================================================================================================== ================== 878430 30 100.0 34 .............................. TGTTTGACATACCACGCAGCAAGCTCGTCGAGTT 878366 30 100.0 38 .............................. AGATTGGTTTCAGTTATAGTAAGCTTGAATTCTACCTG 878298 30 100.0 35 .............................. CTATATCCTAGCTGATACTAATACATACACCATCA 878233 30 93.3 139 .........................T...T ATGGCCAATACCTAATTATTCCAAAAATTTAATACCTTGAAAACTGTATAAAAAATAAATAGCCTCTATTTCTAACCAACAAATACCAAATTTCTTTAGTCTATACTTGTTTGTAGTATAATTACGAGATATTTATTTG T,T [878204,878206] 878062 30 76.7 0 ...........AA.T.A..A.....T...G | T,T [878050,878057] ========== ====== ====== ====== ============================== =========================================================================================================================================== ================== 5 30 94.0 62 GTTAAAATTTATTCCGTTGGAATTTGAAAC # Left flank : ATTGATTTTTAAATTTCAAAGCATAGGAATGCGAACATCATTCTAGCAAAAGCATTGCACGAGCCTATCGTTGTCGATTTTTCTGTTTTTACTTTATCTTACTCAAACGCTGTTCGCATTTTTCTCTTTTTAAGATGCTTCACACTACGCTCGCAACCGTACACGCAAGTAAAGCAAAAAGATTTCTTTTAAATGCCATTTGCATACGCGCCGCACCTTGAAGCGAGTATTAAGATTTGATTATAGCAGAGCATATTTTTTACAAAAAACCTGCTTGATTATCTTATGCACAGGTTTGAATGCTAGTTTAATGCTTTAATTATTAGGGCGTTTTATAACAAAGAGTTTGATAAAACGATAATAAAGCTTGTTCTAAGATTTTGATAATGCCCTATTTTCTAGGTTTTTGCTTGCTAACAATTTTAAATTTTAACTATTTTTAAGATATAAAAATATAGACTTTTAATTTTAATGGCCCTGAAATTTGATATTTTGGTGCT # Right flank : TATCGAGAGCATATTATAAGTATAATTCAAAACAAATATTTTATGCCCCTTAGAAGATGACATTTATGTAAAACTTTTAAAGTTCAATAGCAAGCACCTCAAAAAATAAATTTCATCAAAATACTTAAAAGTTAAAGACTAGCCAAAAACCAGTCAATGTACTTTATGTTTTAGTTAATATATCTAAAATTACTACTAATGCCATATGGTGAGCGTAGATCAAATAATGATATTCAAAAATATAAGGAGCAAGTAGTCCATGCTTAATACAACAAAACACACGAGTTTTATAAGATGGCACTAAAAATACTTTTTTCTCCGAGCGAAAGCAAGAGCACATTTGCAGGGGATAGCTACATACGAAAAGAAAATTTCACCTTTGCTAAGCTCTTTCATCTAAGGCTTGAAATTTTAAAAAAATACGCTTCATTCGTAAAAACGGCAAGCGATAAGGAGCTTTGCAAGCTTTTTGGTTTTAAAAATTTAGATACCGACGATAC # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //