Array 1 13095-15122 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIWK010000013.1 Weizmannia ginsengihum strain Gsoil 114 NODE_13_length_92496_cov_2.136162, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 13095 32 100.0 35 ................................ AAACGGATTTGGATCTGATTATACGGGGGTAAATC 13162 32 100.0 34 ................................ AACAGACAGCAAAATACACGGGCTGGATATGTTT 13228 32 100.0 34 ................................ GCCACGTTAACAGATGCAGCAGGGTCTACATACG 13294 32 100.0 35 ................................ TGCCTTTTAATGCATATGCCTTAAACGTTGAAGGC 13361 32 100.0 33 ................................ TTTTCTTGCAAGAAAGAAAATAGCAACGAAATA 13426 32 100.0 35 ................................ ACCCAGAGTCAATGGCAGCACCAGAAAAATATAGC 13493 32 100.0 33 ................................ ATCCCATTTTTCACGCATTAACCCGGATTCTCG 13558 32 100.0 35 ................................ AGGTTTTACTACAAATAGGTGATGGTCATGAAAAA 13625 32 100.0 35 ................................ CATCTGGAACCATGAGAAGTACAACGAATGCGATA 13692 32 100.0 34 ................................ ATAAAATGGGAAATCGGTTAGTGACGGTTGAAAC 13758 32 100.0 35 ................................ CGATCGAACGGGATACTAACATCGCAGGAATCTCA 13825 32 100.0 36 ................................ ACTGATTACTTGTGTTGCGGTTATAGCGGTTGCTCC 13893 32 100.0 33 ................................ ATCAAAGGCATATGAAGAAGTCGAAATTTGTGA 13958 32 100.0 35 ................................ CGCTATGCTTATTATTTGATAAATACACCAGATAT 14025 32 100.0 35 ................................ TAAGACCCATCATTAACCCTCCAAAGCTTCAATAA 14092 32 100.0 37 ................................ TTTATCTCCCCATACTGGAACAACAGTACACCATCCC 14161 32 100.0 33 ................................ CTATGTGTTATTACTCTAGGAATCTATAGTTTT 14226 32 100.0 33 ................................ AGCTCAGCAAACAGCTGATACTGCATTACAAAG 14291 32 100.0 35 ................................ TCAGATTAAGGAAAGAGAATTTAATGGTGAAAAAA 14358 32 100.0 34 ................................ AAAAGGGAGAAGATACTATGAAAACCATTTATCA 14424 32 100.0 36 ................................ GCAGATGTATACTAAGCTATATGTCTACGGAGGTAC 14492 32 100.0 34 ................................ TGTTATAAAAAATGGACGTCCTTTTAATGAATTT 14558 32 100.0 34 ................................ TCCTGTTACTGGAAAGGCTGTTTTTTCCCATAAA 14624 32 100.0 35 ................................ ACAATTTAATTTTATCTCATCACCAGGATATGCAA 14691 32 100.0 36 ................................ TCCGTGTCATCCAACGCTGCACGAATGCTGTTGGCA 14759 32 100.0 34 ................................ TTGATATGCCTAAATAATCTTGGATGTATTGTCG 14825 32 100.0 34 ................................ TACTTTTGCTGGTATGTCTGCTTTGTCTACGTCA 14891 32 100.0 33 ................................ TCCAGAAGATATGGCAAAACAACTTATCAATAA 14956 32 100.0 34 ................................ CTTTTGCAGTCTCTTTATTCATTTGGACTTTTTC 15022 32 100.0 37 ................................ ATCAATGCACAATCTTATCCTAGAGCAATGGGTAAAA 15091 32 96.9 0 .....................C.......... | ========== ====== ====== ====== ================================ ===================================== ================== 31 32 99.9 35 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TTGGATGAGTATCCACCTTTTTTATGGAAGTAGGTGTAGTAGTGCTAGTATTAATTACGTATGATGTTAGCACTGTTAGTAACAGTGGTCAAAAGCGATTGAGGAAAGTTTCAAAGCTATGTCAAAATTACGGACAACGAGTCCAAAATTCAGTATTTGAATGTATTGTAGATGCTGCGCAGTTTGCAACATTAAAAATTGAGCTTACAAATATTATTGATGAAAATCAAGATAGTCTTAGATTTTATCAACTAGGTAATCATTATAAGAATAAGGTAGAACATATTGGAGTTAAACAATCAATTGATGTGGAGGGGCCTTTAATTTTTTAGTGCGAAAGTAAAGTGCACATAAATTTCCTAGTATATTCGCACCTGAATTTTCATGTTTTATTTCCAATTTTTGTTATATTTTTATTAAGTTCTTTACTTTAGTAAAGAAAATGGTGAGTTTTTAATCAATTTTTTTGTAATGTTGAATTGTTTTGATTAAAATTCGCA # Right flank : TGAGGTTAAATATAATAGTTTCAAAGAGCTGTTAGGTTGCATTAAGTTACATAGAGATTATGAGTAACAGTTTAAGAAGTATGACTTTCTATGTTAGCAATTATTAAGTTTCAGCCTTGTACTTGAATATTAAGTTAAATTACATCATTTAAACTTAATGACTGTTAGAAAATTTTAAATGCGATTCAAAAGTTCATCGGTTTTAAAGCACTTAATACAGACGAAAAAGTGGGAAGAAATTAATTTCATCCGATACAGCTATTGGTAGTTCATTAAAATGGAGGCACTAGAATGTATAAGTAAGTTTGGACCATTTTTATATGCAGGCTGCAGCTTTTTCCCCATCTTCCGTTCTTCGATGAACGAAAGGATACTCTCCTCCTCCATCAGATCAAGACCGACACTGTTTGTACGGCTATTGCACTATCAAAGAATTTAGTGAGGAATAACCTACTCTAAGTATTTCATTCAATTATTTGCCTATAAAGTAAAGTGACGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 62913-63872 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIWK010000011.1 Weizmannia ginsengihum strain Gsoil 114 NODE_11_length_99347_cov_2.186099, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 62913 32 100.0 35 ................................ TGAGTGATTCAGGAGACGAATACAACAGTCTTAAA 62980 32 100.0 33 ................................ ACTTATATATTCTCCATATCCTAACGGGTCACT 63045 32 100.0 37 ................................ GAATAGTAATCCAGCAATAAAGTTTTGTGCTGGGTCA 63114 32 100.0 35 ................................ CAGTCTATACTGTTAAATTCATTTTGAATCTCATC 63181 32 100.0 34 ................................ GATACAACCACCAACCAAATAAAAACCAAAACAT 63247 32 100.0 35 ................................ CTGTCCGTCGTCCGTCATACTGTTCGTACGGTAAT 63314 32 100.0 33 ................................ GGTCCTAATCGTTTTAGAGCCAACACCGCCGCG 63379 32 100.0 33 ................................ TATAACAATAAAAACGGCCATCCTCTCCCTGCT 63444 32 100.0 34 ................................ CATGAGTGCTTTAGTTATTTTAAGAGTATCCTCA 63510 32 100.0 35 ................................ AAGATGGTTTCGTTAAAAACGGGAAAACGTATCGA 63577 32 96.9 35 ....................A........... CGCCAATGCTTGTTGTGGTGTTGTCATCCCGACTG 63644 32 100.0 33 ................................ AAATCATGCCGTTGTTATTGAATGTTTTAAAAC 63709 32 100.0 34 ................................ TCCTTCTCCGTAAGTATATTTCATGTTTTTTACC 63775 32 93.8 34 ..................A..........G.. ATGATGAAAAATTAGCCAATGCTCTGTACATGCT 63841 32 93.8 0 ..................A..........G.. | ========== ====== ====== ====== ================================ ===================================== ================== 15 32 99.0 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TTGACTAGTGTCGTAATTTCTAATCCTACATTCCCAAGTTTTATTAATCGTTCAGAACATCCGCTAAGTCTTCGGCTTTCATGGGATACAACTAATCTTCCTAGATTTACACAGTGGAAAATGAACGGGGCAGGGATGAATGTATTAGGAATAGAGCCGGGAAATTGCTATGTAGAGGGGAGAAAAAAAGAAAGAGAACGCGGTTCGTTGGTGATGCTGGAGCCAGGTGAATCACGAACCTATCATCTTAAACTTGAAATCTTTTGAAAATAATTAGACTCCTTTTATTTTAAAGAGCAGGCATAATCCCTTATAATGAAAATAACGACAAGTGCGAATGTATAGTGTACATAAATTTCACAGGGGATTCGCACCAAAATTTATTATGTTTTTTCCTAGTTATTGTAAAATTTTTGAATGGTTCCTTATGTTTATAAGGGAAATAGCGTATTTTTAGATTAAAAAACACGATTTTGCTGTACTATTATCTGAAAATCGCT # Right flank : TGAAGAGATTATCCTATGTCAACAGATAAATTCTATTAGACGCTTACATTCCTTATTATTTTGATTGTAAGGGAACATTTAATCTTCACTAAGATATTCCCCAATTTAACACCATACTTAACCGCCATGCTCACGTTCATTATCCCCTCTTAATTAGTCTACTTTACATCTGATATTCAGTCTCTAAAGGAAGTGAGATACCTCTATTTATGAGCTCTAAAAAATATAAACAGTTAGTTAAAATAAGTTAATTCTCCGTAAAGCTTTGATGAAGTGGACTTTGCGGTCATTTTTTTATGCTATCTTTTTAGGTGAATTAGATGCTAAAAAGGAGGATGGAGAATGGCGCAGATTCAAATGAAACATGTTTCGAAGTCTTATCAGAAGCAGGCGGCTGTTTTAAATGAGATTAGTTTTTCGGTTGAAAAAGGGGAGTTCTTTATTCTTGTTGGTCCGTCTGGATGTGGGAAGAGTACGATTTTGCGGATGATCGCAGGGCT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //