Array 1 53718-51720 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDCD01000004.1 Xanthomonas axonopodis pv. vasculorum strain CFBP5823 Xava-CFBP5823-G1003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 53717 31 100.0 35 ............................... CGAGAAGCCGCTGCGCGTTCGGCTGTCCAAGGGCC 53651 31 100.0 35 ............................... ATGAGTGTGTCCCGGTTGGCTGATGTGGTTAGAAT 53585 31 100.0 34 ............................... CCATCTGGGGTCAAGTAGTGCGAGCGCCCTAGCT 53520 31 100.0 35 ............................... TTCCACACATTGTGCTCTGGATGGGTGTCATCCTG 53454 31 100.0 34 ............................... CCAGTAGCTCTAACTTAGACTGTGGTAGCTGCTT 53389 31 100.0 36 ............................... TTCCGTCTTACCCTCTCTCAGACAATACATGCACAG 53322 31 100.0 35 ............................... ATTCCAGGCTGCTACATTCCCTGTCTGGCACTCTC 53256 31 100.0 35 ............................... TCCATGTTCTGTGCATGTGTACACTCCCTAAGGTT 53190 31 100.0 34 ............................... AGCAGAATGGAGTGTGTAGTGCTGTGGAACATTC 53125 31 100.0 34 ............................... CAGGTGCCGGCGGACCTGGTGGAGCGTGTCAATG 53060 31 100.0 34 ............................... TCCGACGTGGGCGAACTCACGCGCGAGCAAACAT 52995 31 100.0 34 ............................... GAACAGTAGCCGCCGCCGGCAGGCTCGCCCCTGC 52930 31 100.0 36 ............................... CAGTCGGTGCGCATCCGCTTCGCGGCAATGGATGTG 52863 31 100.0 34 ............................... GATCGACATGATGGTGAGCCTTGGCTGGGCATTT 52798 31 100.0 35 ............................... CTGGACGAGCAGCTGGCCGCTGGTCGCCTTGAGCA 52732 31 100.0 34 ............................... CCGTCCTTGGGCAAGTTGGAGTTCTTCGAGGAAG 52667 31 100.0 35 ............................... AGCGACGCAGCAACGGTCGCCAAAGCATCAACGAC 52601 31 100.0 34 ............................... ACCAGCAGACCAACTACACCGGAGGTCGGTTGTC 52536 31 100.0 35 ............................... TCATCCGCCGTTTTGTACGTAGGATGCAGTAGCGT 52470 31 100.0 35 ............................... AATTCAGGCAGGTACTGGGTATATTGTCCGCCCGG 52404 31 100.0 35 ............................... GCCTTCGTCCAGGCCTTCACGCAGAAGCCGAGCCG 52338 31 100.0 35 ............................... TAGGTATCCCCTGAGAAACCTCCAGTTTGTAGGCG 52272 31 100.0 34 ............................... CCCAGTACACTGTTACAACTGCGGTGAGCTACGG 52207 31 100.0 34 ............................... CCCAGCATGAGTACACACAGTGCTCCTGGATCTG 52142 31 100.0 35 ............................... CTTTAATCTACTGCTACCCAATACCAGAGGTAAGT 52076 31 100.0 34 ............................... CCCAGCATGAGTACACACAGTGCTCCTGGATCTG 52011 31 100.0 35 ............................... CCGTTCTGCTGCGGATAATGCAGAAGCAGCTACAA 51945 31 100.0 33 ............................... CCAGAAGCAGGAGGAGGCACTTCTGCATCCAAC 51881 31 100.0 34 ............................... TTTTCGGATCTACCCGACGCCCACAAGGCCGAGC 51816 31 100.0 35 ............................... TGCTCCCACAATTCCAACCGGGCGACACCGGTACG 51750 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 31 31 100.0 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : GAAATGACGCGGCTCACGTCCCATGATGATTGTTGTCAGCTACGACGTCAGCACAAGCTCTCCGGGGGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGTGACCGTGGCCAGCGCGTGCAGTTCTCGGTCTTCGAAATCGAGGTCGAACCTGCCCAATGGACTGAATTACGTCAGCAACTATGCGACCTGATCGACCCGACGCTGGACAGCCTGCGTTTCTATCACCTTGGCGCGAAATGGGAGGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTGGACCTCAAAGGTCCATTGATTTTTTGACGCGAACCCCAAGCGCCCCCTAAAAACCGGGCAGGTTCGCACCGCACTCAAGCAACTGATTTCCAAAAAGAAAAGAAAATACACTGCGGATCCCCAGCTCCGCGTGGCGACTCCTCGACCGCCTTTCAGCAGGTTCGCGGAATTGCCCGTGTTTTAGCAACGATGACAAGCCCTTATGCTAAGGGGG # Right flank : CTTCTCGGTCTGGCCCGCCCACACCGGGCTGAATGGCCAAGCAGGCCGCAGTGGTCTTAATCGACCGATGCAGTCGCTTAGTTGACCGTGATGGTCTGCGGCGTGCCTGCAGGCTTGCCGTCCACCATCACCTGGGCGGTGTAGGTGCCGGCCGGCCAGCCGTCGGGCTTGCTGAAGCGCATGTTGGTGGTTTCGGCGCCGCTGGTGGTCAGGTTGGCGCTCTGCTCGCCAGCCACTTGCCCGTCCTGGTAGGTGAGCTTGGCCGAGACCGGCACATTGCTCGCGCTGCCCTCGGTCTTGACTGACACGATGATGGTGTCCTTGCTGCCGACGCTGGCCGATGGCGTCACTGTCTTGTCCGCAGCGGCAACCGTGCCGACTGCAACGTTGGACACCGTGACGCCGGTGCCGGCCATCGCCGCGCCACTGGTGCTCGCCGCGCCGGTCGCGGTGCCTTGCGCAGCCTGATCGCTGGCCGGCGGTGTGGCCGCCGGGCCGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //