Array 1 3304-3454 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOTH01000027.1 Acetobacter estunensis strain LMG 1626 contig00027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3304 29 100.0 32 ............................. TCGTTGGACATACGCTTCCCGTCGCCATTGAT 3365 29 100.0 32 ............................. GGCTGGGCTATCATATCCGCCTCGGCCTCGCG 3426 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GAGGTGCTGGAGGCTGGTGGTCTTGATGTGCCACCTGCGCAAGAGGAGGCCATGCCTGTGGCGTTTCAGGATTCCAAGGGGCTGGGTGATGCTGGTCATCGTGGTTGAAAATGCCCCGCCGCGTCTGCGGGGACGGTTGGCGGTGTGGATGCTTGAAGTGCGGGCCGGTGTTTATATTGGCAGCTACGGCCGTCGCGTGCGCGAAATGATCTGGGGGCAGGTTTGCGCCTATATCGAAGAGGGCAATGCCGTTATCGCTTGGGCGGCGGCGAATGATGCGGGATTCGAATTCGATACCTGTGGCCGGAACCGTCGTGTGCCGGTGGATATGGATGGATTCCGGGTCGTTGCTTTCGGTCCTGAGGCTGCTCTTCCGATGCAACTCGGACCGGCTACAGCCACCCTTCCACGGCGTCGGGGCAGAGGATAAAAGAGGCTTCATTATCGGTGGAATCTTTGACATGTAAATAATGCTGTGGAATCAAGTGTTTCCACGAAGA # Right flank : GTTCTATAATCTGGAGTTGGGGACGGGCTGCGACGTTGAAAAACATTTCTGCGAGCGGATGAAAAACGGCGCGGCACGTGAAGTAAAACCGATTGCTATGGGACAGTCTTGACGTTGATGTGAAAGACTGAGCCGCGTGAGCAGGGCCTATCAGAACCCTGCATAGTGCCCCTTGGGAGGTGGCTACGGCAGATAGAATAACACCGTGTCATCACGCTGCTTTATTTTCATGATGCACAGAAAGGATGGGGTGTGTCATCCGAAAACTTTTATGGATCGACTGCCCTCACCGAAAGCGACAGGGCCGGTCCACTGTCGGTGTTTCATCCGTCTGGATAACCATCAGTTCCACTGGCCCATCTCCCACATTACCCGCGAAATGCCCGACATGGCCTTTCGCATCCTTGCGGCTGGCCTGATCTTCTCCAAGCGAGACATCTCCCGGTCCCATGACCGCCTTCGTGCCGTCCATGGCTGTGACATACCATGAGCCTTTCAGC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 312-706 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOTH01000026.1 Acetobacter estunensis strain LMG 1626 contig00026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 312 29 100.0 32 ............................. ACGTTCCGCGAGGGTGGCCGAACGCTTATCGA 373 29 100.0 32 ............................. TTTCTCCAGATGTCATCATGCGTGTCTGGCTC 434 29 100.0 32 ............................. GCGGAAAGCAATGCTTCGCCTACCTGACGATA 495 29 100.0 32 ............................. TTTTCAGGGGCGAATCCAAGAGTCTGAGAGGC 556 29 100.0 32 ............................. GGGAACGCTGTTCTGTATGTGCGAGATAGTAG 617 29 100.0 32 ............................. GCTATGATACTGGAATCTCGAAATACGATGAC 678 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.5 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CAATCTGCTCAAAACGCAGACTGGACGCCATCGCAAAAACCGTCAATCAAATCGCCAAAACCCAGAAATTACCGGCCAAGCACATCAATCAAGGGTTCTTCGATCCCTCCAGGTGCGATACCAAATGACCGAAGTAGGGGCTGGACCCATTTGGTGCAAAACCAAAATCGGTGCGGTTCTTGCCCTGTGGATAAAATCCTCCCTGCGTTCGAACCGCCGCCGCGCGCCAAATTTTGTCCCACCAAATCCCCGGCAATCCCACACAATCCCGAATTACGTGGTGTGCAGAACCCTCTGTCCCCTTACACCGGG # Right flank : ATCCGTCATTCTGATGACGGTCCTGTGAACACCTTGGAACTGCGCCAAGGCTCTATCGTATACATATTACGACACACGTGACGGGGACGGTCCTCTCACAAGCAAGCTCAGGGAGGGCGGGTTCTGTTCACGCTATGCGGGAAGGAGAGGGTGGCGGGGGCCATTCTTCTTGGGGTGCTGATGCATGGGGGAGGGGCAGCTTGGGCGCGCACACCTCCTCCAATCACTGATAATCATGATCCCGGGTTTGGTGCGCAAGGAAAGGTCGAGATCGTTGGCGCGTTACAGGCGCCCGACCCGTCTGGAATTGCCGTGATTGACGGGCGGATGTTTCTCAGCTTCCCCAAGCACGATGGCGATCATGCGGGGCCAGTTCTGGCAGAGTGGAAAGATGGGCGCCTCGAGCCATTCCCGGCAACGACCGTACCAATAGGTGCACCGCCCTCTTCTCGGCTGCTTTCCGTGCATGGTTTGACGACCGACACGCAGGGACGACTATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 107227-107377 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOTH01000006.1 Acetobacter estunensis strain LMG 1626 contig00006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 107227 29 100.0 32 ............................. GCTCTGGCAAATCGCTTTCGTCCAGTATCATG 107288 29 100.0 32 ............................. GACCAGTTGGCGGAGAACTCCCGCCGCTTGGA 107349 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GCTTTCCGCTCAATACGCCCAGCGTTATACCGCCACGCGGATGGTGCTGGCGGGGGATGCCGCACATGGCATCCACCCTATTGCCGGGCAAGGGCTCAACTTGGGTTTTCGCGATGTGATCGCGCTGGCGGATCTGTTGATCGAAACGCACCGCAAGGGAGAGAATCCCGGTGCGCCATCGGTTCTGGCGCGCTATCAGCGTCGGTGCCGTCCCACCAACATGCTCATGTTCGTGGCGACCGATGCGCTGGATCGGCTGTTCAGCAATGACAATCCGGTGCTGCGATTGGCTCGCGATGTGGGGATTGCCGCCGTGCAACGTATGCCGCGTCTGCGTAAGGCGTTCGTGAAGCATGCGATGGGCGTGTGAATGAGCCGTTTCTGTTTGGTTTGTAAGGGTTGGGTTGAGGCGATTATCGAGAGCGTCCTGAGCGGGCGTTTTGCTCGGTGGAATCTTTGACAGCAAAATAGTTGTTTGTTTTCCAGTGGTTCTGGGAAGA # Right flank : TGACTTTGGCGGCGGCAAACGTCACCAGTCCGGGTGAAGCGCGCCGGATGGTTTTGCACAGCCGGACATATAATCCCGCCCCCCAAAACCACGCCATTTAACTCGCGCCTCAGACCTCTCTCAGAGGCCGATTAGAAACCACCAATTCTCCTCTCACCCGTCCAGTTCCACCACTCTGACGGTCAGCATAGCGCGTCGCGACGTCCATCATCTCAAACCCGTCAAACACCTCACGCACCTCATGAGCCGCCACCACACGACGGCGGAAAAATACACCGCCCATGCCCACAAACGGCTCAATATACGACCGATGGGGAATCGCCTCGATCTGCGCACAGATCCGTCGGGCCAATAGCTTCTTGCCACCCACATACGCTGCCGGCGGCAGCGCAAAATCGCCTCGTTGCTTCATAGTCTGGGACACTCGATCATGCGCCCGCCTCTGCAGAGGTGGCGGGCTGGTTTTCCAGGCGTGTGTCCGCACGCGGTTCGGCTGTTGG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 104448-104297 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOTH01000009.1 Acetobacter estunensis strain LMG 1626 contig00009, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 104447 29 100.0 32 ............................. TTCTGGCCGTCCATGCAGATCGTGCCGACTCC 104386 29 100.0 32 ............................. TAAAGACCTCGACCGGGAGGCAGTCAGACGCA 104325 29 93.1 0 ............C........G....... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGTTCCCCGCAGACGCGGGGATGAACCG # Left flank : TTCTACGGCGATCTCGTCTCCTTCATGACGTCCGGCCCCGTGGTCGTGCAGGTTCTCGAAGGCGAGAACGCCGTGGCCAAGAACCGTGAGGTGATGGGCGCGACCGATCCGAAAAAGGCCGAGCCGAAGACGATCCGCGCTCAGTTCGCCGAGAGCATCGAGGCCAACTCGGTCCACGGTTCCGACAGCGCCGAGAACGCCGCCAACGAGATCCGCTTTTTCTTCGCCGAGACGGAAATCCTGCCCTGATCTGAGGGTGGTTTCTGACGGGCCGGAGCTTCTCCGGTCTGGACGATAGAATGCGGGACGGTCGCTGAGTGAGAGCCATGTTCTCCTCAGCGGCCGTTTTCGTAGGAAGTGTCAGGTGAACAAGATTGGCTTCAAGGTGGCTTGCGGCGGCCTTTGTTACGTGGGTAAGAAAGGTTGGCCGTAAGGCGTTTTGGGTTGGTGGATTTTTGACCTGCCTTATTGTTCTTTGAAATCAATGGGTTTCAGGAAGA # Right flank : ATCCGCGTGGATAATCCCCGGACTGGAACGGTCGAGATACCAACAATTATTGGAGGGCATAAGTCGTTCTCATGGGCATCATGAAAGCAGAGCTATGTGGTGACACGGTGATATTCTCTCCGCCGTAGCCACCTCCCAAGGGGCGCAATGCAGGGTTCTCGGGAGGTCCTGCCCGCATGGCTCTGCTCTCCGCATTTTGAGACAGATCACTCAACTTGTCCTGCCTCCGGTTGCGCAGACGTTTGTGCCCCACTCTTTGCACTCCACCCTGAACTTCGGCATACTCCCGGACCCGTCGCGTGACGGGTCCGTTTCATCATGTGTGTAAAGACACGGCCAAGGCTCAGAAAACTTGGCCAAGACGACAGGAACCGACCATGAGTGTCATGCTCACCCGCTCCGCTCCGATTCAGACAGCCGCTCCCGTGGTTGCCAACTGGTCGCCGGAGAGCTGGCGCTCGTTTCCCATCAGGCAGGTGCCGTCCTATCCGGACGAAGCG # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //