Array 1 3491653-3498259 **** Predicted by CRISPRDetect 2.4 *** >NC_016803.1 Pseudodesulfovibrio mercurii, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 3491653 32 100.0 34 ................................ GACCGGCAGCGTGCCGGGCAGCTGCGGGGCATGA 3491719 32 100.0 35 ................................ GTTGGTATCGCCATGAGATATTGGAAGCTCTAGAT 3491786 32 100.0 34 ................................ TATTGATAAAGCCGCTTCCCGCGCCGCCATACCC 3491852 32 100.0 34 ................................ CTATTTCCGCGCCCGGTTCGTAGGCTGCGGATGC 3491918 32 100.0 36 ................................ ATGTAATAGAGATCGTAGCCAGACACAGAAATGAAC 3491986 32 100.0 34 ................................ ATTACCTGTTGGATTACGTCCCAAAACCGCAGGA 3492052 32 100.0 35 ................................ AGGCAACTGGACCTCATCCAAGTCACCGGCGAACC 3492119 32 100.0 33 ................................ TTGCGCAGCCTGGGCCGCACGCGCTTGGCCAGG 3492184 32 100.0 35 ................................ GGGCCATGATCCTGCATGACCGGCCGCCGCGCGAG 3492251 32 100.0 33 ................................ TCGGGATCACGCTTCTCGGTGATGCCGTCGAAG 3492316 32 100.0 33 ................................ TGGTTCCAGGTGTCAGGTAGTCGCGTGCTCCTG 3492381 32 100.0 35 ................................ TAGTCCGCTTCTATCCTCCTGACTCGTTGTGGTAG 3492448 32 100.0 33 ................................ CGGTCCCGTCCAGCATCTTGGCGATGTCCGCGC C,G [3492452,3492463] 3492515 32 100.0 34 ................................ ATCAATGTTCCGGCGGAGCGACGGGCCGACATGT 3492581 32 100.0 34 ................................ GAGGACGGTCCAGGACGAGGCCACGCCCTCGCGG 3492647 32 100.0 34 ................................ CACCCCGGTGACGATCGCCGGGGACCCGGCGCTG 3492713 32 100.0 36 ................................ GCCGATAGGCGGCAGGAAACACTTGCCCGCCCTGAC 3492781 32 100.0 34 ................................ AAATTTTTCGCTGACGAAGACTAAAGGGGAAAAT 3492847 32 100.0 34 ................................ CAGTCGCTGCGAGGGCAGGCTGGACAGAGGCAGG 3492913 32 100.0 37 ................................ CTGATGCTGGCCATGTCTGACCGGCGCGAGATCACCG 3492982 32 100.0 34 ................................ TGATTACGCTTTGAAATTTGGTGAGATAACCTGT 3493048 32 100.0 34 ................................ TTCGCCTACGTCAACCATTACAAGTGGGACGTCG 3493114 32 100.0 34 ................................ CTCCTGCGCGTCACAGACGTGAGTGAGGTTTAAC 3493180 32 100.0 35 ................................ TCATTACCAATTGATAATATTATCAACTGAAACGA 3493247 32 100.0 36 ................................ GGACCATATCGCCCAGACCCGCAGCGGGCACCGGGC 3493315 32 100.0 34 ................................ GTCTCCGGGGCATCCGGGTGCACGTCCAGGCGAT 3493381 32 100.0 35 ................................ TCGTCGAAGATGCGGTTTCGGGTATCCTTGTCGGG 3493448 32 100.0 34 ................................ CCGGCGTATCTGCGTAGATATGTCGGACATCGCC 3493514 32 100.0 34 ................................ GCCAATGAGTGTCACGAAAACCACCACTCCGGCC 3493580 32 100.0 35 ................................ TGCGCCATAGGCGAGGGCTTTGTGGAGCCCGGAGG 3493647 32 100.0 33 ................................ TCCACGCGGAGAGTATGTGTCGGCGGTGGAGCA 3493712 32 100.0 36 ................................ TTTTCTGAAAAGTTTTTTGCCAATAGGAAAATGCCG 3493780 32 100.0 35 ................................ GCGCACCGCCCTCGGGCTCGGCGCGGCAGCGACCA 3493847 32 100.0 35 ................................ GCCCTCGAACTGTCGGGGGACGACGACCGCGATTA 3493914 32 100.0 35 ................................ CGGTCCCGTCCAGCATCTTGGCGATGTCCGCGCAC 3493981 32 100.0 35 ................................ AGCCGCCCGAATAATGAGCTTATTAGTGCTGTCGC 3494048 32 100.0 33 ................................ ATGGACCCCAAGGTCAAGACCATCGAGTTCGTG 3494113 32 100.0 35 ................................ GACAGGTGCGAGTGTGGGACGATAACCGGCAAAAG 3494180 32 100.0 36 ................................ ATGGAGCCGTCCAGGCTCAAAGTCCTCAACGGGGCC 3494248 32 100.0 33 ................................ TCACGCGAAACCCAACAGCCCGCCGAGCAGTAA 3494313 32 100.0 34 ................................ CTCCGGTGATCTCCAGCACGGCGGGCGACGTGGG 3494379 32 100.0 34 ................................ AAAGCGTAATCAGAAACGGTATAGGCGGTTTGAT 3494445 32 100.0 36 ................................ AGCACGTGATGGCGCTGTGCGACTCGCTGATCGGGA 3494513 32 100.0 34 ................................ TTGTGTATGGATTGCGCCAATAGACGCGATACGG 3494579 32 100.0 35 ................................ CCGCCCCACGGCATGTTGCTGGCCAGGGTCAGGGC 3494646 32 100.0 35 ................................ GGTCTGCTGGGCAGGGCGACGGACAGTCTGCGGCC 3494713 32 100.0 34 ................................ AACCACAAGACGGAAGGTGAAAGGCTCGCCAGCG 3494779 32 100.0 35 ................................ ACGGTGTTGCCGTCCTCCCAAATGGTCTTGCCGGT 3494846 32 100.0 36 ................................ TTGTGCCACGTCGGATACGGTAGCGAGTACCGCGTT 3494914 32 100.0 35 ................................ GTCCGGCGACACGAGACGGTCCCCGGAACTGCGCC 3494981 32 100.0 35 ................................ AGGAGGCGGTGTGCTGTTTGCGGGAAGCCTGTGAA 3495048 32 100.0 35 ................................ GTCAGATCGCCCGCGTCTCCGTCCGGGGCCAAGTA 3495115 32 100.0 36 ................................ CTGGAGGCCTTGAGCGGCTCCATTTCGGCTACTGCG 3495183 32 100.0 33 ................................ CGCGTCCGTGGATACTTCGTAGCCCGAGGCGTT 3495248 32 100.0 35 ................................ CTAGACAAAAAGGACGCGGGGAGCCTCCAGACATT 3495315 32 100.0 34 ................................ GGCTACCGTCTTTGCCCGCTTGGCGAGGCCGTCC 3495381 32 100.0 33 ................................ ACCGGCGATCTGACCATGACCACCTACTCCGGC 3495446 32 100.0 34 ................................ GCAGCCTGGAGCAAGGCCGATGCGTGCAGCCCGT 3495512 32 100.0 35 ................................ AGGATGCCCTTGCCCAGGGCGGTCAACACGCTCAT 3495579 32 100.0 34 ................................ GATTTATTCACCGGGCGATTAAAGCCGGTGTTTG 3495645 32 100.0 35 ................................ GGCCTGCTTATGAAAGAATGTCCGTTGATACTCCA 3495712 32 100.0 33 ................................ CGATGGTCGCCGTGCCTGCCGCGATGGCGAACT 3495777 32 100.0 35 ................................ CCGTGGCGTAGTCGCCCGGCATGTCCTCCCGTCTC 3495844 32 100.0 35 ................................ CGTGACACCGTTAAATAAATAGGTAACACAAAATG 3495911 32 100.0 34 ................................ GAGCGTGCCGAAAAGCTTAACCTCAAAAAGTCGG 3495977 32 100.0 33 ................................ ATGTAATACAGATCATATCCAGACACGGAAAAA 3496042 32 100.0 34 ................................ GGTCAGGCTGTACCCCTTGTAACGCTTGGCTTCG 3496108 32 100.0 35 ................................ TGGCAAGCGGGGTGCCTGTGTCTGCCCTGATCCCA 3496175 32 100.0 33 ................................ ATGCTCTGCCGCTCGACGGTCACTGTCTGCCGG 3496240 32 100.0 34 ................................ GAAAGTAAATCGTTGCTGCATGCTACTCCTCCGG 3496306 32 100.0 35 ................................ CAGACCGCGACGTTCCAGGAACATCCTCAAACGTT 3496373 32 100.0 34 ................................ CTGTCCAGGTCTTGAGGTTGGACAGCGTGGGCTG 3496439 32 100.0 34 ................................ CGTTGCTAATAAGATTCGGAGCCACCGCCAAGAG 3496505 32 100.0 34 ................................ GAGCCCCAGGGCAAGGGCGAGCAGTACGGGAACG 3496571 32 100.0 35 ................................ CAGACCGCGACGTTCCAGGAACATCCTCAAACGTT 3496638 32 100.0 34 ................................ ATCAAGGCGGTTGGAATCGCGATTATCGCCGGAC 3496704 32 100.0 34 ................................ TCGAAACTGCCGTCGACGTAGAGCGCCAGCACAC 3496770 32 100.0 34 ................................ CATTCCTCGCACCCGTTGCACTGGGGCGGCCTGG 3496836 32 100.0 34 ................................ TGCCCCAGCTCGTATGCGCCCGGCACCTGTAGTA 3496902 32 100.0 33 ................................ CGTGGCCGCATATGCACCGGACCAGGAGTCGAA 3496967 32 100.0 35 ................................ GAGCAGATCCTGATATGCGAGGCGCTGGCCGACGA 3497034 32 100.0 34 ................................ TATAAGCCCAGGACTACCGTCGCCACCAGCAACA 3497100 32 100.0 33 ................................ AATCCTAACTCCAACCAGGGGAGCGCATCGTGA 3497165 32 100.0 35 ................................ CGCCTCTCGCCCTGCCCGAGCCGCCGAAGCCTAAG 3497232 32 100.0 34 ................................ GCTCGGGGGGGTACACCCACCCCATCGAGGCCTG 3497298 32 100.0 34 ................................ TTTCTCCGGCGGCGAGACTGACCTGTTCCGTGAG 3497364 32 100.0 35 ................................ TTGACCTGCCAGGGTGTAGTCGTGGTTGCCATGGG 3497431 32 100.0 37 ................................ TGTCGAGCAGGGACGCCGATAAATGCCGTATCGCGTG 3497500 32 100.0 35 ................................ GTCGGTCAGTGTAAGTTCGGTGCCGTTGACGGTTG 3497567 32 100.0 33 ................................ CACGTCGCGTGGATGCCCTTGATCGCCTTGGCC 3497632 32 100.0 36 ................................ TCTGTTTTCGAAAACCGTGACCACGGTCTCAGTGAC 3497700 32 100.0 33 ................................ TGCAATGAATAGGCAGGAAAGCTCTACAGGATG 3497765 32 100.0 34 ................................ CCTGGCGCACCGCTGCGGAGTGCATCGACTGGTC 3497831 32 100.0 36 ................................ ACCTGGGCGTCGGGGCCATCGGCAACGGCGGTGCTG 3497899 32 100.0 33 ................................ ACCTCCTCCATCATCAGGGCGTCGGTGATCATG 3497964 32 100.0 33 ................................ CGCCCCGAGGAGTAGCGCAAAGGTCCGCATGGT 3498029 32 100.0 33 ................................ CTGCAATGACTGCGACCGGCGGCATGCCCAGGA 3498094 32 100.0 34 ................................ CACGCGGACTCGCGCAAAATCTGGTCCGCCCTGT 3498160 32 96.9 35 ........................T....... GACACCGTGGACACCAGGGACTGCTCCGGCAACTC 3498227 31 84.4 0 .....T........-...A......G.....T | GC [3498252] ========== ====== ====== ====== ================================ ===================================== ================== 100 32 99.8 34 GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC # Left flank : CTATCCGCCCTACTTCTGGAAGTGAGTATGCTGGTACTGGTCAGTTACGACGTCAGTTTCGAGGAGCCGGACGGCAAGCGGCGGTTGCGCAAGATCGCCAAGGTTTGCGAAAATTTCGGGCAACGGGTGCAATATTCCGTGTTCGAATGCGTGGTCGAGCCCGCCCAGTGGGTCCAGTTGCGCCATCGGTTGCTCGAGGCCTACGACGAGGAGCGAGACAGCCTGCGCTTCTACTTTCTGGGCAAGAACTGGCAGCGGCGGGTGGAGCAGCACGGCTCAGGCACCGCCTACGATCCGGAAACGGACGCCCTGATCCTCTAGCGCGAACCCCAAGTGGTGGCAAAATCCTCGGGAGGTTCGCGCGGTTGCCAATAATCGGTCATTTCAGGTAATTGAAGAATCATGTCCCGCCATGGGACATGGTGTGGCCGACCCGTTCCTGCCTGTTCGCGGAGTCCCGCCTGGAAACCCGCGCCAAGAGGACCTTCGGCCCCCCCACA # Right flank : TCTGGAACTTGCAAGGCTTCACCGTTGGTGGTTGCGGAGAATGGTGCGCGAGGGCTGAAACCGGGGGTGTCCGGTCAGTTCCGTGACCTCCGGGAATCCGGGGTTATTCCACGGTGAGGGTCAGGGTGTGGGTCAGGGTGGCGGTGGCGTCGGTGCCTCGGAAGGCGCCTTGGGCCGGGGCGGTCTGGGCCGGGTCGTGGGAGGCGGCCAGGGCCAGGTGGCGGTCGGCCGTGAGCAGGCCGTGGGTGGGGTCCAGGCCGAGCCAGCCCGCGCCGGGCAGGTAGGCCTCGGCCCAGGCGTGCAGGTCGCGCTTGTCCTGGGCGTCGTCGCCGGACTGGTAGCCGGACACGAACCGGGCCGGAATGCCCGCCCGGCGGCAGCAGGCGATGAACAGGACGGCCGAGTCGCGGCAGGCTCCCCGGCGCTCGCGGCAGACCGTGGCCGGGGCGAGGATGCCGGGCTCCCGGCGGATGACCTTGGCCACGTTGCCGAAGATCCAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //