Array 1 41029-41310 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV789444.1 Lactobacillus sp. HMSC17G08 Scaffold242, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================== ================== 41029 36 100.0 78 .................................... NNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACATGACGCAGTTGGCGAAACCTTTGCACGTT 41143 36 88.9 30 ................................GAAC AAGTTCGGCCTCAACGGTGTACCACTTTCC 41209 36 88.9 30 ................................GAAC CAACATCAACAACAGCCGGCAATTGCTGCC 41275 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================================================== ================== 4 36 94.5 46 GTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNN # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : NNNNNNNNNNNNNNNNNTTGAACTGATTGATCTGACATCTACCTGAGACTGGCGCAACGGAACAAGGGGCAAAATATTGGTTCTTGAACTGATTGATCTGACATCTACCTGAGACCAACGGCCAGCGACAGCGCAACGCGTCAACGTTCTTGAACTGATTGATCTGACATCTACCTGAGACCGAAACAAGTCCGGATAGGTATCATTAGCAGTTCTTGAACTGATTGATCTGACATCTACCTGAGACGTCTTGCCAAACCTTGCCGCCATCCTTGTAGTTCTTGAACTGATTGATCTGACATCTACCTGANNNNNNNNNNNNNNNNNNNNTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGCGGCATCTTCAAAATCAAAACGACGCGCAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGTTGACGCGTTGCGCTGTCGCTGGCCGTTGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTCGCT # Questionable array : NO Score: 4.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-1.49, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNN # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 41623-41389 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV789444.1 Lactobacillus sp. HMSC17G08 Scaffold242, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 41622 36 91.7 30 NNN................................. TACAAGGATGGCGGCAAGGTTTGGCAAGAC 41556 36 100.0 30 .................................... TGCTAATGATACCTATCCGGACTTGTTTCG 41490 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 41424 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 97.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGAACTGATTGATCTGACATCTACCTGAGACCTCGGCGCCGTTGATGGTCAATGTCAGCGAGTTCTTGAACTGATTGATCTGACATCTACCTGAGACCAACGGCCAGCGACAGCGCAACGCGTCAACGTTCTTGAACTGATTGATCTGACATCTACCTGAGACTGCGCGTCGTTTTGATTTTGAAGATGCCGCGTTCTTGAACTGATTGATCTGACATCTACCTGANNNNNNNNNNNNNNNNN # Right flank : CAATATTTTGCCCCTTGTTCCGTTGCGCCAGTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNNNNNNNNNNNNNNNNNNTTGAACTGATTGATCTGACATCTACCTGAGACGGCAGCAATTGCCGGCTGTTGTTGATGTTGGTTCTTGAACTGATTGATCTGACATCTACCTGAGACGGAAAGTGGTACACCGTTGAGGCCGAACTTGTTCTTGAACTGATTGATCTGACATCTACCTGAGACAACGTGCAAAGGTTTCGCCAACTGCGTCATGTTCTTGAACTGATTGATCTGACATCTACCTGNNNNNNNNNNNNNNNNNNNNTTGAACTGATTGATCTGACATCTACCTGAGACCGGTGTTTTCACACAGCCTCTTAATCAATCAGTTCTCGGCTATCCATAAAATCTCTGTCAATATAGATATACTGGCACTTCTCAAAAAACTTTCTGCGTTCGACATCTGAAAATTCAATGAGAAGTAATTCCAACGATGT # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 3 41637-41870 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV789444.1 Lactobacillus sp. HMSC17G08 Scaffold242, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 41637 36 91.7 30 NNN................................. GCGGCATCTTCAAAATCAAAACGACGCGCA 41703 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 41769 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 41835 36 91.7 0 .................................NNN | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 95.8 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : CACGTTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACAAGTTCGGCCTCAACGGTGTACCACTTTCCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACCAACATCAACAACAGCCGGCAATTGCTGCCGTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNNNNNNNNNNNNNNNNNNTTGAACTGATTGATCTGACATCTACCTGAGACTGGCGCAACGGAACAAGGGGCAAAATATTGGTTCTTGAACTGATTGATCTGACATCTACCTGAGACCAACGGCCAGCGACAGCGCAACGCGTCAACGTTCTTGAACTGATTGATCTGACATCTACCTGAGACCGAAACAAGTCCGGATAGGTATCATTAGCAGTTCTTGAACTGATTGATCTGACATCTACCTGAGACGTCTTGCCAAACCTTGCCGCCATCCTTGTAGTTCTTGAACTGATTGATCTGACATCTACCTGANNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [40.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 4 42930-43163 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV789444.1 Lactobacillus sp. HMSC17G08 Scaffold242, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 42930 36 100.0 30 .................................... CGGCACGCTATTCCATCCGATTAGCTACTT 42996 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 43062 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 43128 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACGACAACAGACTCCGTCAACATCAGTCTTAA # Right flank : CTGATTTGCGAGATGTCGCGATAAGAAGTCAGTCTCAGGTAGATGTCAGATCAATCAGTTCANNNNNNNNNNNNNNNNNNNNCTCCGGTCCCTAACCGCGCCGGCTCGCGCTCACATAAAAAAAGCCAGAAAGACATGACTTGTGGTGCACACAAGTCGTATCTTTCTGGTTTTGCCTAATTCAATAGTTACAAGCCCAATTAAAATGTATTCGCTTTCAACATCACCATCTTATCTGATGGATTAGCGTTCGTCAACTACTTTTTAAACTTTGTCCTTGACTCTTGGCTAAACGGGCGATGTGGAGGGTTAGATAAATTTGTTCGTTTTTTGAAATCGGTCCGGGTAATTTTTGCTGCATAAACTTAACCACATCTTCCATGCACCGGTATGCCTGCGTATAGTCTTGTTGCAGATGTGCCAGCAAGGCCTGATCATATGGCTCGGGTGATACCGGTGTTTTCGCCGTTGAAGTTGCATAAACGCGTTGAAGAAAGAAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 5 50510-50739 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV789444.1 Lactobacillus sp. HMSC17G08 Scaffold242, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 50510 36 86.1 30 NNNNN............................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 50576 36 100.0 30 .................................... GAATGTTTTACCATCGGAACGCGTGGTAAT 50642 36 100.0 30 .................................... CTCGTGACTTGTCGTGATATGCATACGCGC 50708 32 88.9 0 ................................---- | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 93.8 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GGAAACTGTTCTTCAATCAACTGTAGTCCGAGCTGAGCGTATCCCTTTCCTTGATAAAACGGCAAGATTAAAAATGGTGAAATACGGGCTGCCGAATTTTTGAGATCTGTTACAACGCGAATCAGGCCTATGTGTTTATCTTCAACGGTTATAAAGAAGAAGGCATTGTTAGGCCGTTTGAACTTTTTCTGTAAGCTTTTCAACGATTCACAGTAGGGATTGGTTTCCCGATCTTGATATTTGCCGTAAAGTGATTTGAACGCCTGTTGGTACATGTGACGGATTTCTTTGAGATCAGTGTAAAATACTGGCGAAAGGATTAGTTTCGCTTTTGACATTGCTGTTGCCTTCTTTTGGGATTTGCATAGCATTTATGAGGTGAGTCTTCACTGAAGGTTTTTGATCTGACATCTACCTGAGACTGCCGCGTCGATCTTTGTCAATACCCGAGTGTTCTTGAACTGATTGATCTGACATCTACCTGANNNNNNNNNNNNNNN # Right flank : | # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.96%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [36.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //